| Literature DB >> 29867390 |
Robert Suchting1, Joshua L Gowin2, Charles E Green3, Consuelo Walss-Bass1, Scott D Lane1,2.
Abstract
Rationale: Given datasets with a large or diverse set of predictors of aggression, machine learning (ML) provides efficient tools for identifying the most salient variables and building a parsimonious statistical model. ML techniques permit efficient exploration of data, have not been widely used in aggression research, and may have utility for those seeking prediction of aggressive behavior.Entities:
Keywords: FKBP5; aggression; boosting; data science; machine learning; psychopathy; trauma
Year: 2018 PMID: 29867390 PMCID: PMC5949329 DOI: 10.3389/fnbeh.2018.00089
Source DB: PubMed Journal: Front Behav Neurosci ISSN: 1662-5153 Impact factor: 3.558
Summary of all variables that served as candidate predictors (base-learners) in the initial component-wise gradient boosting (mboost) model.
| Predictor variable | Frequency (%) |
|---|---|
| Sex | Male = 36 (75.00); Female = 12 (25.00) |
| Ethnicity | AA = 37 (77.08); Asian = 2 (4.17); Cauc = 3 (8.33); Hisp = 4 (10.42) |
| Smoking Status | No = 28 (58.33); Yes = 20 (41.67) |
| FKBP5_13 | C/C = 22 (45.83); C/T = 18 (37.50); T/T = 8 (16.67) |
| FKBP5_92 | C/C = 18 (37.50); C/T = 21 (43.75); T/T = 9 (22.92) |
| FKBP5_94 | C/C = 16 (45.83); C/T = 21 (37.50); T/T = 11 (16.67) |
| Age | 31.69 (7.60) | 31 (13.00) |
| Education | 13.84 (4.29) | 12 (2.00) |
| IPAS—Premeditated Aggression | 20.96 (5.36) | 22 (6.50) |
| IPAS—Impulsive Aggression | 27.66 (6.59) | 28 (9.00) |
| CTQ—Emotional Abuse | 8.29 (3.48) | 7.5 (4.25) |
| CTQ—Physical Abuse | 8.24 (3.16) | 8 (3.00) |
| CTQ—Sexual Abuse | 6.22 (3.63) | 5 (0.00) |
| CTQ—Emotional Neglect | 8.73 (3.64) | 6 (3.00) |
| CTQ—Physical Neglect | 6.69 (1.94) | 5 (3.00) |
| SRP-III—Interpersonal Manipulation | 38.62 (9.88) | 40 (14.50) |
| SRP-III—Callous Affect | 41.98 (8.12) | 42 (10.50) |
| SRP-III—Erratic Lifestyle | 42.87 (7.35) | 42 (10.00) |
| SRP-III—Criminal Tendencies | 36.36 (10.86) | 36 (14.00) |
| Shipley II | 200.27 (26.36) | 199 (40.00) |
| BPAQ—Total Score | 64.04 (19.78) | 59 (22.50) |
Frequencies (%) and mean (SD) are provided for each predictor.
Parameter estimates of the optimized model derived by the mboost algorithm, based on the original 20 predictor variables with Buss-Perry Aggression Questionnaire (BPAQ) total score as the outcome variable, ranked by absolute value.
| Variable | Coefficient |
|---|---|
| SRP3_CA | 7.238 |
| SRP3_ELS | 3.273 |
| SRP3_CT | 2.251 |
| CTQ_PN | −2.132 |
| SRP3_IM | 1.633 |
| CTQ_PA | 1.428 |
| FKBP5_13-2 (T/T) | −0.994 |
| Smoker-1 (YES) | 0.722 |
| FKBP5_13-1 (C/T) | −0.251 |
Predictors were z-scored before estimation; BPAQ total score was measured in raw units. R.
Coefficients, standard errors, t-values, p-values and bootstrapped SE and 95% confidence intervals from the final simplified six-factor model (adjusted R2 = 0.66), derived via backwards elimination from the full penalized eight-factor model.
| Variable | Estimate | SE | Bootstrap SE | Bootstrap 95% CI | |||
|---|---|---|---|---|---|---|---|
| (Intercept) | 64.693 | 2.968 | 21.799 | 0.000 | 3.061 | 59.610 | 72.170 |
| SMOKER (YES) | 8.386 | 3.507 | 2.391 | 0.021 | 3.701 | 1.409 | 16.030 |
| FKBP5_13-1 (C/T) | −6.006 | 3.884 | −1.546 | 0.130 | 4.835 | −15.461 | 3.543 |
| FKBP5_13-2 (T/T) | −10.733 | 4.910 | −2.186 | 0.035 | 3.977 | −18.620 | −3.070 |
| CTQ_PA | 6.074 | 1.897 | 3.203 | 0.003 | 1.694 | 1.945 | 8.951 |
| CTQ_PN | −5.395 | 1.863 | −2.896 | 0.006 | 1.725 | −9.529 | −2.195 |
| SRP3_IM | 3.316 | 2.448 | 1.355 | 0.183 | 2.428 | −1.200 | 8.320 |
| SRP3_CA | 10.689 | 2.602 | 4.107 | 0.000 | 3.088 | 4.910 | 17.290 |
Note: FKBP5_13 = rs1360780 (PA, physical aggression; PN, physical neglect); CTQ, Childhood Trauma Questionnaire; SRP3_CA, Self-Report of Psychopathy Callous Affect.