Literature DB >> 29862464

Raman spectral feature selection using ant colony optimization for breast cancer diagnosis.

Omid Fallahzadeh1, Zohreh Dehghani-Bidgoli2, Mohammad Assarian1.   

Abstract

Pathology as a common diagnostic test of cancer is an invasive, time-consuming, and partially subjective method. Therefore, optical techniques, especially Raman spectroscopy, have attracted the attention of cancer diagnosis researchers. However, as Raman spectra contain numerous peaks involved in molecular bounds of the sample, finding the best features related to cancerous changes can improve the accuracy of diagnosis in this method. The present research attempted to improve the power of Raman-based cancer diagnosis by finding the best Raman features using the ACO algorithm. In the present research, 49 spectra were measured from normal, benign, and cancerous breast tissue samples using a 785-nm micro-Raman system. After preprocessing for removal of noise and background fluorescence, the intensity of 12 important Raman bands of the biological samples was extracted as features of each spectrum. Then, the ACO algorithm was applied to find the optimum features for diagnosis. As the results demonstrated, by selecting five features, the classification accuracy of the normal, benign, and cancerous groups increased by 14% and reached 87.7%. ACO feature selection can improve the diagnostic accuracy of Raman-based diagnostic models. In the present study, features corresponding to ν(C-C) αhelix proline, valine (910-940), νs(C-C) skeletal lipids (1110-1130), and δ(CH2)/δ(CH3) proteins (1445-1460) were selected as the best features in cancer diagnosis.

Entities:  

Keywords:  Ant colony optimization; Breast cancer; Cancer detection; Feature selection; Raman spectroscopy

Mesh:

Year:  2018        PMID: 29862464     DOI: 10.1007/s10103-018-2544-3

Source DB:  PubMed          Journal:  Lasers Med Sci        ISSN: 0268-8921            Impact factor:   3.161


  5 in total

1.  In vivo diagnosis of gastric cancer using Raman endoscopy and ant colony optimization techniques.

Authors:  Mads Sylvest Bergholt; Wei Zheng; Kan Lin; Khek Yu Ho; Ming Teh; Khay Guan Yeoh; Jimmy Bok Yan So; Zhiwei Huang
Journal:  Int J Cancer       Date:  2010-10-08       Impact factor: 7.396

2.  Raman spectroscopy for the detection of cancers and precancers.

Authors:  A Mahadevan-Jansen; R R Richards-Kortum
Journal:  J Biomed Opt       Date:  1996-01       Impact factor: 3.170

Review 3.  Raman spectroscopy for cancer detection and cancer surgery guidance: translation to the clinics.

Authors:  Inês P Santos; Elisa M Barroso; Tom C Bakker Schut; Peter J Caspers; Cornelia G F van Lanschot; Da-Hye Choi; Martine F van der Kamp; Roeland W H Smits; Remco van Doorn; Rob M Verdijk; Vincent Noordhoek Hegt; Jan H von der Thüsen; Carolien H M van Deurzen; Linetta B Koppert; Geert J L H van Leenders; Patricia C Ewing-Graham; Helena C van Doorn; Clemens M F Dirven; Martijn B Busstra; Jose Hardillo; Aniel Sewnaik; Ivo Ten Hove; Hetty Mast; Dominiek A Monserez; Cees Meeuwis; Tamar Nijsten; Eppo B Wolvius; Robert J Baatenburg de Jong; Gerwin J Puppels; Senada Koljenović
Journal:  Analyst       Date:  2017-08-21       Impact factor: 4.616

Review 4.  Raman technologies in cancer diagnostics.

Authors:  Lauren A Austin; Sam Osseiran; Conor L Evans
Journal:  Analyst       Date:  2016-01-21       Impact factor: 4.616

Review 5.  Real-time in vivo cancer diagnosis using Raman spectroscopy.

Authors:  Wenbo Wang; Jianhua Zhao; Michael Short; Haishan Zeng
Journal:  J Biophotonics       Date:  2014-09-12       Impact factor: 3.207

  5 in total
  1 in total

1.  Use of Raman spectroscopy to evaluate the biochemical composition of normal and tumoral human brain tissues for diagnosis.

Authors:  Ricardo Pinto Aguiar; Edgar Teixeira Falcão; Carlos Augusto Pasqualucci; Landulfo Silveira
Journal:  Lasers Med Sci       Date:  2020-11-06       Impact factor: 3.161

  1 in total

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