| Literature DB >> 29855305 |
Giulia Fiscon1,2, Emanuel Weitschek3,4, Alessio Cialini3, Giovanni Felici3, Paola Bertolazzi3, Simona De Salvo5, Alessia Bramanti5, Placido Bramanti5, Maria Cristina De Cola5.
Abstract
BACKGROUND: Alzheimer's Disease (AD) is a neurodegenaritive disorder characterized by a progressive dementia, for which actually no cure is known. An early detection of patients affected by AD can be obtained by analyzing their electroencephalography (EEG) signals, which show a reduction of the complexity, a perturbation of the synchrony, and a slowing down of the rhythms.Entities:
Keywords: Alzheimer’s disease; Classification; Electroencephalography signals; Feature extraction
Mesh:
Year: 2018 PMID: 29855305 PMCID: PMC5984382 DOI: 10.1186/s12911-018-0613-y
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Fig. 1Flowchart of the EEG signal analysis procedure
Overview of the recruited subjects
| Sample | Number of samples (%) | Average age (std dev.) in years | ||||
|---|---|---|---|---|---|---|
| type | Male | Female | Total | Male | Female | Total |
| AD | 20 (41%) | 29 (59%) | 49 | 78.6 (4.1) | 78.2 (7.6) | 78.4 (6.4) |
| MCI | 17 (46%) | 20 (54%) | 37 | 75.7 (9.7) | 72.7 (9.1) | 74.1 (9.4) |
| HC | 13 (56%) | 10 (44%) | 23 | 68.1 (6.9) | 62.3 (8.3) | 65.6 (7.9) |
| Total | 50 (46%) | 59 (54%) | 109 | 74.9 (8.2) | 73.6 (9.9) | 74.2 (9.1) |
Schema of the matrix obtained after the feature extraction phase
| Sample | Coefficient (1,1) | ⋯ | Coefficient ( | Sample type |
|---|---|---|---|---|
| sample1 |
| ⋯ |
| HC |
| sample2 |
| ⋯ |
| MCI |
| ⋯ | ⋯ | ⋯ | ⋯ | ⋯ |
| sample |
| ⋯ |
| AD |
N = number of samples, M = number of coefficients, M+1 = number of features, E = number of electrodes, a = element of the matrix
Classification performance [%] by using M=16 Fourier Coefficients as features and a leave-one-out sampling with 72, 60, 86, 109 folds for HC vs AD, HC vs MCI, MCI vs AD, HC vs CASE, respectively
| HC | HC | MCI | HC | |
|---|---|---|---|---|
| Accuracy | 72.2 | 71.7 | 80.2 | 74.7 |
| Precision | 71.1 | 78.9 | 80.2 | 74.0 |
| Sensitivity | 72.2 | 71.7 | 80.2 | 74.7 |
| Specificity | 59.0 | 79.0 | 78.5 | 46.3 |
| F-measure | 71.4 | 71.8 | 80.1 | 74.7 |
Classification performance [%] by using M=48 Wavelet Coefficients as features and a leave-one-out sampling with 72, 60, 86, 109 folds for HC vs AD, HC vs MCI, MCI vs AD, HC vs CASE, respectively
| HC | HC | MCI | HC | |
|---|---|---|---|---|
| Accuracy | 83.3 | 91.7 | 79.1 | 73.4 |
| Precision | 83.3 | 91.8 | 79.3 | 74.7 |
| Sensitivity | 83.3 | 91.7 | 79.1 | 73.4 |
| Specificity | 78.0 | 91.5 | 79.1 | 51.5 |
| F-measure | 83.3 | 91.7 | 79.1 | 74.0 |
Classification performance (Accuracy [%]) by using 10-fold cross validation (CV) sampling and holdout (90% training and 10% test percentage split) for HC vs AD, HC vs MCI, MCI vs AD, HC vs CASE, taking into account Wavelet (WT) and Fourier (FT) Coefficients as features
|
|
| |||
|---|---|---|---|---|
| 10-fold CV | Holdout | 10-fold CV | Holdout | |
| HC | 76.4 | 71.4 | 80.6 | 85.7 |
| HC | 93.3 | 83.3 | 83.3 | 83.3 |
| MCI | 66.3 | 88.9 | 66.7 | 77.2 |
| HC | 81.7 | 81.8 | 84.4 | 90.9 |
Fig. 2C4.5 tree for HC vs MCI of size 7 with 4 leaves. Each path from the root to a leaf represents a classification rule. Each leaf is associated to a class and two numbers. The first number is the total number of instances recognized by the rule, while the second optional number represents how many ones (if any) are misclassified
Fig. 3Scatter plot of three example features (i.e., W_5_42, W_6_13, W_16_23) extracted from the C4.5 tree for HC (red points) vs MCI (blue points) subjects. The x-axis and y-axis represent the feature values for W_5_42 vs W_6_13 on the left, for W_5_42 vs W_16_23 on the right