Literature DB >> 2985520

Variability of the region of the herpes simplex virus type 1 genome yielding defective DNA: SmaI fragment polymorphism.

K Umene.   

Abstract

A SmaI map of class I defective DNA of herpes simplex virus type 1 (HSV1) was constructed using a set of deletion hybrid phages. Four SmaI fragments on the defective DNA had a variability in length common among 15 HSV1 isolates: the 1.45 kilobase (kb) fragment located within the BamHI-Z (map coordinates 0.936-0.949) fragment, the 0.92-kb fragment neighboring on the 'a' sequence, the 0.44-kb fragment containing the intervening sequence of immediate-early mRNA-5 gene, and the 0.205-kb fragment corresponding to the 'a' sequence. The four SmaI fragments have several sets of reiterated sequences, among which the 1.45- and 0.92-kb fragments hybridized with mammalian cellular DNAs (human, monkey, rabbit, and mouse).

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Year:  1985        PMID： 2985520     DOI： 10.1159/000149596

Source DB:  PubMed          Journal:  Intervirology        ISSN： 0300-5526            Impact factor:   1.763


  13 in total

1.  Homogeneity and diversity of genome polymorphism in a set of herpes simplex virus type 1 strains classified as the same genotypic group.

Authors:  K Umene; H Sakaoka
Journal:  Arch Virol       Date:  1991       Impact factor: 2.574

2.  Recombination of the internal direct repeat element DR2 responsible for the fluidity of the a sequence of herpes simplex virus type 1.

Authors:  K Umene
Journal:  J Virol       Date:  1991-10       Impact factor: 5.103

3.  Transition from a heterozygous to a homozygous state of a pair of loci in the inverted repeat sequences of the L component of the herpes simplex virus type 1 genome.

Authors:  K Umene
Journal:  J Virol       Date:  1987-04       Impact factor: 5.103

4.  Restriction fragment length polymorphism analysis using random chromosomal gene probes for epidemiological analysis of Campylobacter jejuni infections.

Authors:  S Fujimoto; K Umene; M Saito; K Horikawa; M J Blaser
Journal:  J Clin Microbiol       Date:  2000-04       Impact factor: 5.948

5.  Restriction endonucleases recognizing DNA sequences of four base pairs facilitate differentiation of herpes simplex virus type 1 strains.

Authors:  K Umene
Journal:  Arch Virol       Date:  1987       Impact factor: 2.574

6.  Cleavage in and around the DR1 element of the A sequence of herpes simplex virus type 1 relevant to the excision of DNA fragments with length corresponding to one and two units of the A sequence.

Authors:  K Umene
Journal:  J Virol       Date:  2001-07       Impact factor: 5.103

7.  Short, duplicated sequence indicative of the recombinogenicity of the junction between a unique and an inverted repeat sequence in the S component of the herpes simplex virus type 1 genome.

Authors:  K Umene
Journal:  J Virol       Date:  1989-05       Impact factor: 5.103

8.  Excision of DNA fragments corresponding to the unit-length a sequence of herpes simplex virus type 1 and terminus variation predominate on one side of the excised fragment.

Authors:  K Umene
Journal:  J Virol       Date:  1994-07       Impact factor: 5.103

9.  Herpes simplex virus type 1 variant a sequence generated by recombination and breakage of the a sequence in defined regions, including the one involved in recombination.

Authors:  K Umene
Journal:  J Virol       Date:  1993-09       Impact factor: 5.103

10.  Preparation of herpes simplex virus type 1 genomic markers to differentiate strains of predominant genotypes.

Authors:  K Umene; M Yoshida
Journal:  Arch Virol       Date:  1994       Impact factor: 2.574
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