Literature DB >> 29853204

DNA Modifications: Naturally More Error Prone?

Marketa Tomkova1, Benjamin Schuster-Böckler2.   

Abstract

Epigenetic DNA modifications are essential for normal cell function in vertebrates, but they can also be hotspots of mutagenesis. Methylcytosine in particular has long been known to be less stable than other nucleotides and spontaneously deaminates to thymine. Beyond this well-established phenomenon, however, the influence of epigenetic marks on mutagenesis has recently become an active field of investigation. In this review, we summarize current knowledge of the interactions between different DNA modifications and other mutagenic processes. External mutagens, such as UV light or smoking carcinogens, affect modified cytosines differently from unmodified ones, and modified cytosine can in some cases be protective rather than mutagenic. Notably, cell-intrinsic processes, such as DNA replication, also appear to influence the mutagenesis of modified cytosines. Altogether, evidence is accumulating to show that epigenetic changes have a profound influence on tissue-specific mutation accumulation.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  5-hydroxymethylcytosine; 5-methylcytosine; CpG dinucleotides; DNA modifications; mutagenesis

Mesh:

Substances:

Year:  2018        PMID: 29853204     DOI: 10.1016/j.tig.2018.04.005

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  9 in total

1.  Cytosine Methylation Affects the Mutability of Neighboring Nucleotides in Germline and Soma.

Authors:  Vassili Kusmartsev; Magdalena Drożdż; Benjamin Schuster-Böckler; Tobias Warnecke
Journal:  Genetics       Date:  2020-02-20       Impact factor: 4.562

Review 2.  Integration of Epigenetic Mechanisms into Non-Genotoxic Carcinogenicity Hazard Assessment: Focus on DNA Methylation and Histone Modifications.

Authors:  Daniel Desaulniers; Paule Vasseur; Abigail Jacobs; M Cecilia Aguila; Norman Ertych; Miriam N Jacobs
Journal:  Int J Mol Sci       Date:  2021-10-11       Impact factor: 5.923

3.  The impact of rare germline variants on human somatic mutation processes.

Authors:  Mischan Vali-Pour; Ben Lehner; Fran Supek
Journal:  Nat Commun       Date:  2022-06-28       Impact factor: 17.694

Review 4.  The Roles of Plant-Derived Triptolide on Non-Small Cell Lung Cancer.

Authors:  Jie Wei; Yuanliang Yan; Xi Chen; Long Qian; Shuangshuang Zeng; Zhi Li; Shuang Dai; Zhicheng Gong; Zhijie Xu
Journal:  Oncol Res       Date:  2019-04-08       Impact factor: 5.574

5.  Reference genome assembly for Australian Ascochyta lentis isolate Al4.

Authors:  Robert C Lee; Lina Farfan-Caceres; Johannes W Debler; Angela H Williams; Robert A Syme; Bernadette M Henares
Journal:  G3 (Bethesda)       Date:  2021-02-09       Impact factor: 3.154

6.  Deficiency of replication-independent DNA mismatch repair drives a 5-methylcytosine deamination mutational signature in cancer.

Authors:  Hu Fang; Xiaoqiang Zhu; Haocheng Yang; Jieun Oh; Jayne A Barbour; Jason W H Wong
Journal:  Sci Adv       Date:  2021-11-03       Impact factor: 14.136

7.  DNA methylation reprogramming, TE derepression, and postzygotic isolation of nascent animal species.

Authors:  M Laporte; J Le Luyer; C Rougeux; A-M Dion-Côté; M Krick; L Bernatchez
Journal:  Sci Adv       Date:  2019-10-16       Impact factor: 14.136

8.  Mutational processes of distinct POLE exonuclease domain mutants drive an enrichment of a specific TP53 mutation in colorectal cancer.

Authors:  Hu Fang; Jayne A Barbour; Rebecca C Poulos; Riku Katainen; Lauri A Aaltonen; Jason W H Wong
Journal:  PLoS Genet       Date:  2020-02-03       Impact factor: 5.917

9.  Physicochemical Foundations of Life that Direct Evolution: Chance and Natural Selection are not Evolutionary Driving Forces.

Authors:  Didier Auboeuf
Journal:  Life (Basel)       Date:  2020-01-21
  9 in total

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