Literature DB >> 29851374

Evaluation of the genus Thiothrix Winogradsky 1888 (Approved Lists 1980) emend. Aruga et al. 2002: reclassification of Thiothrix disciformis to Thiolinea disciformis gen. nov., comb. nov., and of Thiothrix flexilis to Thiofilum flexile gen. nov., comb nov., with emended description of Thiothrix.

Rich Boden1,2, Kathleen M Scott3.   

Abstract

Thiothrix is the type genus of the Thiotrichaceae in the Thiotrichales of the Gammaproteobacteria, comprising nine species of sulfur-oxidising filamentous bacteria, which are variously autotrophic, heterotrophic or have mixed metabolic modes. Within the genus, four species show 16S rRNA gene identities lower the Yarza threshold for the rank of genus (94.5 %) - Thiothrix disciformis, Thiothrix flexilis, Thiothrix defluvii and Thiothrix eikelboomii - as they show no affiliation to extant genera, a polyphasic study was undertaken including biochemical, physiological and genomic properties and phylogeny based on the 16S rRNA gene (rrs), recombination protein A (RecA), polynucleotide nucleotidyltransferase (Pnp), translation initiation factor IF-2 (InfB), glyceraldehyde-3-phosphate dehydrogenase (GapA), glutaminyl-tRNA synthetase (GlnS), elongation factor EF-G (FusA) and concatamers of 53 ribosomal proteins encoded by rps, rpl and rpm operons, all of which support the reclassification of these species. We thus propose Thiolinea gen. nov. and Thiofilum gen. nov. for which the type species are Thiolinea disciformis gen. nov., comb. nov. and Thiofilum flexile gen. nov., comb. nov. We also propose that these genera are each circumscribed into novel families Thiolinaceae fam. nov. and Thiofilaceae fam. nov., and that Leucothrix and Cocleimonas are circumscribed into Leucotrichaceaefam. nov. and provide emended descriptions of Thiothrix and Thiotrichaceae.

Entities:  

Keywords:  Gammaproteobacteria; Thiofilum; Thiolinea; Thiothrix; Thiotrichales; filamentous bacteria

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Substances:

Year:  2018        PMID: 29851374     DOI: 10.1099/ijsem.0.002816

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Insights into growth kinetics and roles of enzymes of Krebs' cycle and sulfur oxidation during exochemolithoheterotrophic growth of Achromobacter aegrifaciens NCCB 38021 on succinate with thiosulfate as the auxiliary electron donor.

Authors:  Lee P Hutt; Glenn M Harper; A John Moody; Rich Boden
Journal:  Arch Microbiol       Date:  2020-09-28       Impact factor: 2.552

2.  Two New Species of Filamentous Sulfur Bacteria of the Genus Thiothrix, Thiothrix winogradskyi sp. nov. and 'Candidatus Thiothrix sulfatifontis' sp. nov.

Authors:  Nikolai V Ravin; Simona Rossetti; Alexey V Beletsky; Vitaly V Kadnikov; Tatyana S Rudenko; Dmitry D Smolyakov; Marina I Moskvitina; Maria V Gureeva; Andrey V Mardanov; Margarita Yu Grabovich
Journal:  Microorganisms       Date:  2022-06-27

Review 3.  History of the Study of the Genus Thiothrix: From the First Enrichment Cultures to Pangenomic Analysis.

Authors:  Nikolai V Ravin; Tatyana S Rudenko; Dmitry D Smolyakov; Alexey V Beletsky; Maria V Gureeva; Olga S Samylina; Margarita Yu Grabovich
Journal:  Int J Mol Sci       Date:  2022-08-23       Impact factor: 6.208

  3 in total

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