Literature DB >> 29848799

Routes for nanoparticle translocation through polymer-brush-modified nanopores.

Mario Tagliazucchi1, Kai Huang, Igal Szleifer.   

Abstract

This work presents a theoretical study of the translocation routes of nanoparticles through polymer-brush modified nanopores. The calculations were performed with a molecular theory that explicitly accounts for the shape, size, conformations and interactions of all molecular species in the system. This work reports molecular-theory calculations allowing inhomogeneities in the three spatial dimensions, which allows us to study for the first time off-axis translocation routes, i.e. routes that do not coincide with the axis of the pore. Free-energy landscapes within the pore were obtained for particles of different sizes and affinity for the polymer brush. The minimum free-energy paths on these landscapes determine the translocation routes. Decreasing the size of the particle or increasing its affinity for the polymer, shifts the translocation route from the central axis of the pore towards its walls. Interestingly, for a given polymer-particle affinity, there exists an intermediate particle size that results in the most flat potential of mean force for translocation, therefore, that will optimize the rate of translocation.

Entities:  

Year:  2018        PMID: 29848799     DOI: 10.1088/1361-648X/aac90b

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  3 in total

1.  Nanocompartmentalization of the Nuclear Pore Lumen.

Authors:  Kai Huang; Mario Tagliazucchi; Sung Hyun Park; Yitzhak Rabin; Igal Szleifer
Journal:  Biophys J       Date:  2019-11-26       Impact factor: 4.033

2.  Free energy calculations shed light on the nuclear pore complex's selective barrier nature.

Authors:  Atsushi Matsuda; Mohammad R K Mofrad
Journal:  Biophys J       Date:  2021-07-31       Impact factor: 3.699

Review 3.  On the nuclear pore complex and its emerging role in cellular mechanotransduction.

Authors:  Atsushi Matsuda; Mohammad R K Mofrad
Journal:  APL Bioeng       Date:  2022-03-10
  3 in total

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