Literature DB >> 29847807

Allosteric Coupling of CARMIL and V-1 Binding to Capping Protein Revealed by Hydrogen-Deuterium Exchange.

Britney Johnson1, Patrick McConnell2, Alex G Kozlov2, Marlene Mekel2, Timothy M Lohman2, Michael L Gross3, Gaya K Amarasinghe4, John A Cooper5.   

Abstract

Actin assembly is important for cell motility. The ability of actin subunits to join or leave filaments via the barbed end is critical to actin dynamics. Capping protein (CP) binds to barbed ends to prevent subunit gain and loss and is regulated by proteins that include V-1 and CARMIL. V-1 inhibits CP by sterically blocking one binding site for actin. CARMILs bind at a distal site and decrease the affinity of CP for actin, suggested to be caused by conformational changes. We used hydrogen-deuterium exchange with mass spectrometry (HDX-MS) to probe changes in structural dynamics induced by V-1 and CARMIL binding to CP. V-1 and CARMIL induce changes in both proteins' binding sites on the surface of CP, along with a set of internal residues. Both also affect the conformation of CP's ββ subunit "tentacle," a second distal actin-binding site. Concerted regulation of actin assembly by CP occurs through allosteric couplings between CP modulator and actin binding sites.
Copyright © 2018 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CARMIL; actin regulation; allostery; hydrogen-deuterium exchange; mass spectrometry

Mesh:

Substances:

Year:  2018        PMID: 29847807      PMCID: PMC6282700          DOI: 10.1016/j.celrep.2018.04.096

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  31 in total

1.  Structural basis for capping protein sequestration by myotrophin (V-1).

Authors:  Adam Zwolak; Ikuko Fujiwara; John A Hammer; Nico Tjandra
Journal:  J Biol Chem       Date:  2010-06-10       Impact factor: 5.157

2.  How capping protein binds the barbed end of the actin filament.

Authors:  Martin A Wear; Atsuko Yamashita; Kyoungtae Kim; Yuichiro Maéda; John A Cooper
Journal:  Curr Biol       Date:  2003-09-02       Impact factor: 10.834

3.  Sequence-specific determination of protein and peptide concentrations by absorbance at 205 nm.

Authors:  Nicholas J Anthis; G Marius Clore
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

4.  V-1 regulates capping protein activity in vivo.

Authors:  Goeh Jung; Christopher J Alexander; Xufeng S Wu; Grzegorz Piszczek; Bi-Chang Chen; Eric Betzig; John A Hammer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-10       Impact factor: 11.205

Review 5.  Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions.

Authors:  Michael J Chalmers; Scott A Busby; Bruce D Pascal; Graham M West; Patrick R Griffin
Journal:  Expert Rev Proteomics       Date:  2011-02       Impact factor: 3.940

6.  HDX workbench: software for the analysis of H/D exchange MS data.

Authors:  Bruce D Pascal; Scooter Willis; Janelle L Lauer; Rachelle R Landgraf; Graham M West; David Marciano; Scott Novick; Devrishi Goswami; Michael J Chalmers; Patrick R Griffin
Journal:  J Am Soc Mass Spectrom       Date:  2012-06-13       Impact factor: 3.109

Review 7.  Actin, a central player in cell shape and movement.

Authors:  Thomas D Pollard; John A Cooper
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

8.  Direct observation of the uncapping of capping protein-capped actin filaments by CARMIL homology domain 3.

Authors:  Ikuko Fujiwara; Kirsten Remmert; John A Hammer
Journal:  J Biol Chem       Date:  2009-11-19       Impact factor: 5.157

9.  The structure of the dynactin complex and its interaction with dynein.

Authors:  Linas Urnavicius; Kai Zhang; Aristides G Diamant; Carina Motz; Max A Schlager; Minmin Yu; Nisha A Patel; Carol V Robinson; Andrew P Carter
Journal:  Science       Date:  2015-02-12       Impact factor: 47.728

10.  Cryo-EM shows how dynactin recruits two dyneins for faster movement.

Authors:  Linas Urnavicius; Clinton K Lau; Mohamed M Elshenawy; Edgar Morales-Rios; Carina Motz; Ahmet Yildiz; Andrew P Carter
Journal:  Nature       Date:  2018-02-07       Impact factor: 49.962

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  8 in total

1.  Comparative Analysis of CPI-Motif Regulation of Biochemical Functions of Actin Capping Protein.

Authors:  Patrick McConnell; Marlene Mekel; Alexander G Kozlov; Olivia L Mooren; Timothy M Lohman; John A Cooper
Journal:  Biochemistry       Date:  2020-03-10       Impact factor: 3.162

Review 2.  Potent Neutralization of Staphylococcal Enterotoxin B In Vivo by Antibodies that Block Binding to the T-Cell Receptor.

Authors:  Gang Chen; Hatice Karauzum; Hua Long; Danielle Carranza; Frederick W Holtsberg; Katie A Howell; Laura Abaandou; Bojie Zhang; Nick Jarvik; Wei Ye; Grant C Liao; Michael L Gross; Daisy W Leung; Gaya K Amarasinghe; M Javad Aman; Sachdev S Sidhu
Journal:  J Mol Biol       Date:  2019-03-27       Impact factor: 5.469

3.  CARMIL3 is important for cell migration and morphogenesis during early development in zebrafish.

Authors:  Benjamin C Stark; Yuanyuan Gao; Diane S Sepich; Lakyn Belk; Matthew A Culver; Bo Hu; Marlene Mekel; Wyndham Ferris; Jimann Shin; Lilianna Solnica-Krezel; Fang Lin; John A Cooper
Journal:  Dev Biol       Date:  2021-09-30       Impact factor: 3.582

4.  Photorhabdus luminescens TccC3 Toxin Targets the Dynamic Population of F-Actin and Impairs Cell Cortex Integrity.

Authors:  Songyu Dong; Weili Zheng; Nicholas Pinkerton; Jacob Hansen; Svetlana B Tikunova; Jonathan P Davis; Sarah M Heissler; Elena Kudryashova; Edward H Egelman; Dmitri S Kudryashov
Journal:  Int J Mol Sci       Date:  2022-06-24       Impact factor: 6.208

5.  A novel mode of capping protein-regulation by twinfilin.

Authors:  Adam B Johnston; Denise M Hilton; Patrick McConnell; Britney Johnson; Meghan T Harris; Avital Simone; Gaya K Amarasinghe; John A Cooper; Bruce L Goode
Journal:  Elife       Date:  2018-10-23       Impact factor: 8.140

6.  The dynein light chain protein Tda2 functions as a dimerization engine to regulate actin capping protein during endocytosis.

Authors:  Andrew K Lamb; Andres N Fernandez; Olve B Peersen; Santiago M Di Pietro
Journal:  Mol Biol Cell       Date:  2021-06-03       Impact factor: 3.612

7.  Dual regulation of the actin cytoskeleton by CARMIL-GAP.

Authors:  Goeh Jung; Miao Pan; Christopher J Alexander; Tian Jin; John A Hammer
Journal:  J Cell Sci       Date:  2022-06-20       Impact factor: 5.235

8.  Synergistic Allostery in Multiligand-Protein Interactions.

Authors:  Abhijeet Ghode; Lissy Z F Gross; Wei-Ven Tee; Enrico Guarnera; Igor N Berezovsky; Ricardo M Biondi; Ganesh S Anand
Journal:  Biophys J       Date:  2020-09-28       Impact factor: 4.033

  8 in total

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