| Literature DB >> 29844822 |
Kui Zhao1, Xiaoxu Li1,2, Jiongke Wang1, Jiajia Liu1, Wang Gong1, Hao Xu1, Jiayi Wang1, Lu Jiang1, Hongxia Dan1, Jing Li1, Xin Zeng1, Qianming Chen1.
Abstract
The aetiology of oral squamous cell carcinoma (OSCC) remains unclear. Numerous single nucleotide polymorphisms (SNPs) associated with cancer have been identified using genome-wide association studies (GWAS). The present study was designed to identify common SNPs associated with cancer susceptibility and to evaluate their involvement in OSCC. Susceptible loci were identified by analysing a cancer GWAS catalogue. A multicentre case-control study using an OSCC and control population was performed for selected SNPs. The function of the selected locus and its associated gene was explored using a reverse transcription-polymerase chain reaction, enzyme linked immunosorbent assay and immunohistochemistry. The association between genotypes and clinical parameters was assessed in 76 patients with OSCC. Rs2294008 located in the prostate stem cell antigen gene (PSCA) was selected. It was identified that the rs2294008 polymorphism was associated with OSCC susceptibility and PSCA may be involved in the development, progression and prognosis of OSCC.Entities:
Keywords: oral squamous cell carcinoma; prostate stem cell antigen gene; rs2294008; single nucleotide polymorphism
Year: 2018 PMID: 29844822 PMCID: PMC5958807 DOI: 10.3892/ol.2018.8468
Source DB: PubMed Journal: Oncol Lett ISSN: 1792-1074 Impact factor: 2.967
SNPs located in exons.
| SNP | Gene symbol | SNP | Gene symbol |
|---|---|---|---|
| rs671 | ALDH2 | rs2274223 | PLCE1 |
| rs8170 | C19orf62 | rs3765524 | PLCE1 |
| rs130067 | CCHCR1 | rs2294008 | PSCA |
| rs971074 | ADH7 | rs2292884 | MLPH |
| rs1051730 | CHRNA3 | rs4072037 | MUC1 |
| rs1229984 | ADH1B | rs10936599 | MYNN |
SNP, single nucleotide polymorphism.
Allele distribution of the 12 selected SNPs.
| SNP ID | Gene symbol | A/a | HWE | Risk allele | MAF in case | MAF in control | P (Chi-squared) |
|---|---|---|---|---|---|---|---|
| rs671 | ALDH2 | G/A | 0.2648 | A | 0.226 | 0.179 | 0.0674 |
| rs8170 | C19orf62 | C/T | 1[ | T | 0.005 | 0.002 | 0.4569 |
| rs130067 | CCHCR1 | A/C | 0.1356 | C | 0.346 | 0.309 | 0.2178 |
| rs971074 | ADH7 | G/A | 0.6897 | G | 0.104 | 0.129 | 0.2115 |
| rs1051730 | CHRNA3 | C/T | 1[ | T | 0.037 | 0.032 | 0.662 |
| rs1229984 | ADH1B | A/G | 0.0462[ | A | 0.315 | 0.339 | 0.4224 |
| rs2274223 | PLCE1 | A/G | 0.549 | G | 0.228 | 0.198 | 0.2528 |
| rs2292884 | MLPH | A/G | 0.5995 | A | 0.279 | 0.29 | 0.6836 |
| rs2294008 | PSCA | C/T | 0.8509 | C | 0.258 | 0.323 | 0.0239[ |
| rs3765524 | PLCE1 | C/T | 0.4102 | T | 0.227 | 0.195 | 0.2204 |
| rs4072037 | MUC1 | A/G | 2.29E-14[ | A | 0.007 | 0.019 | 0.1023 |
| rs10936599 | MYNN | T/C | 0.0884 | T | 0.429 | 0.456 | 0.4001 |
P<0.05.
Allelic distribution was not in Hardy Weinberg-genetic equilibrium (HWE). MAF, minor allele frequency; SNP, single nucleotide polymorphism.
Figure 1.The rs2294008 polymorphism in PSCA. OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
Genotype distribution of the 8 SNPs.
| SNP ID | Gene symbol | A/a | Population | AA | Aa | aa | P-value | P (AA+Aa vs. aa) | P (AA vs. Aa+aa) |
|---|---|---|---|---|---|---|---|---|---|
| rs671 | ALDH2 | G/A | OSCC | 163 | 101 | 12 | |||
| Control | 139 | 67 | 4 | 0.142 | 0.135 | 0.108 | |||
| rs130067 | CCHCR1 | A/C | OSCC | 125 | 119 | 38 | |||
| Control | 107 | 86 | 24 | 0.49 | 0.417 | 0.269 | |||
| rs971074 | ADH7 | C/A | OSCC | 223 | 56 | 1 | |||
| Control | 165 | 48 | 4 | 0.207 | 0.1 | 0.335 | |||
| rs2274223 | PLCE1 | A/G | OSCC | 169 | 96 | 16 | |||
| Control | 134 | 77 | 4 | 0.099 | 0.031[ | 0.621 | |||
| rs2292884 | MLPH | A/G | OSCC | 141 | 122 | 17 | |||
| Control | 111 | 86 | 20 | 0.351 | 0.185 | 0.86 | |||
| rs2294008 | PSCA | C/T | OSCC | 161 | 98 | 24 | |||
| Control | 94 | 103 | 18 | 0.009[ | 0.966 | 0.004[ | |||
| rs3765524 | PLCE1 | C/T | OSCC | 169 | 98 | 15 | |||
| Control | 137 | 77 | 4 | 0.128 | 0.043[ | 0.507 | |||
| rs10936599 | MYNN | T/C | OSCC | 85 | 153 | 45 | |||
| Control | 61 | 113 | 42 | 0.581 | 0.301 | 0.662 |
A. Major allele; a. Minor allele.
P<0.05.
Figure 2.PSCA expression pattern in eight cancer and two normal cell lines. OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
PSCA expression in OSCC and normal serum.
| Serum type | Number of patients | PSCA+ | PSCA- |
|---|---|---|---|
| Normal serum | 10 | 0 | 10 |
| Serum of OSCC | 32 | 14 | 18 |
| OSCC CC-genotype | 11 | 6 | 5 |
| OSCC CT/TT-genotype | 21 | 8 | 13 |
OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
PSCA protein expression in OSCC and normal tissues.
| Tissue type | Number | PSCA+ | PSCA- | P-value[ |
|---|---|---|---|---|
| OSCC | 9 | 6 | 3 | |
| Normal tissue | 8 | 1 | 7 | 0.022[ |
| OSCC Elisa+ | 5 | 5 | 0 | |
| OSCC Elisa- | 4 | 1 | 3 | 0.012[ |
| OSCC CC-genotype | 4 | 3 | 1 | |
| OSCC CT/TT-genotype | 5 | 3 | 2 | 0.685 |
P<0.05.
Calculated by Fisher's method. OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen; SNP, single nucleotide polymorphism.
Figure 3.PSCA expression in OSCC tissues. (A and B) Representative images indicating PSCA expression in tissues from patients with OSCC and PSCA-positive serum (IRS=6; A, 100×; B, 200×). (C and D) PSCA expression in tissues from patients with OSCC and PSCA-negative serum (IRS=2; C, ×100; D, ×200). OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
Figure 4.PSCA expression in normal epithelium. Representative images from normal tissue with an IRS=0 (A, ×100; B, ×200). OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
Figure 5.PSCA expression in OSCC epithelium with different genotypes. (A and B) Representative images indicating PSCA expression in tissues from OSCC patients presenting the CC genotype (A, ×100; B, ×200). (C and D) Representative images indicating PSCA expression in OSCC patients presenting the CT genotype (C, ×100; D, ×200). Representative images indicating PSCA expression in tissues from OSCC patients presenting the TT genotype (E, ×100; F, ×200). OSCC, oral squamous cell carcinoma; PSCA, prostate stem cell antigen.
Rs2294008 polymorphism and clinical parameters.
| Total | CC | CT&TT | P-value | |
|---|---|---|---|---|
| Sex | ||||
| Female | 27 | 19 | 8 | |
| Male | 49 | 25 | 24 | 0.102 |
| Age, years | ||||
| ≤65 | 58 | 34 | 24 | |
| >65 | 18 | 10 | 8 | 0.818 |
| Smoking | ||||
| Yes | 42 | 28 | 14 | |
| No | 34 | 16 | 18 | 0.085 |
| Drinking | ||||
| Yes | 48 | 33 | 15 | |
| No | 28 | 11 | 17 | 0.012[ |
| Grading | ||||
| 1 | 49 | 27 | 22 | |
| 2&3 | 27 | 17 | 10 | 0.507 |
| Nodal status | ||||
| Negative | 52 | 34 | 18 | |
| Positive | 24 | 10 | 14 | 0.052 |
| Tumor size | ||||
| T1 | 22 | 17 | 5 | |
| T2 | 35 | 20 | 15 | |
| T3 | 5 | 2 | 3 | |
| T4 | 13 | 4 | 9 | 0.045[ |
| Tumor stage | ||||
| 1 | 20 | 15 | 5 | |
| 2 | 23 | 14 | 9 | |
| 3 | 14 | 8 | 6 | |
| 4 | 18 | 6 | 12 | 0.075 |
P<0.05.
Recurrence analysis of 76 patients with OSCC.
| Genotype | Total | No recurrence | Percentage (%) | P-value |
|---|---|---|---|---|
| CC | 44 | 23 | 52.30 | |
| CT+TT | 32 | 12 | 37.50 | 0.261 |
| Overall | 76 | 35 | 46.10 |
OSCC, oral squamous cell carcinoma.
Figure 6.Survival analysis of 76 patients with OSCC with different genotypes.
Result of COX proportional Hazards model.
| 95.0% CI for Exp(B) | ||||
|---|---|---|---|---|
| OR | Lower | Upper | P-value | |
| Genotype | 0.9248 | 0.4513 | 1.8951 | 0.8310 |
| Sex | 1.2570 | 0.4548 | 3.4739 | 0.6593 |
| Smoking | 0.7874 | 0.2831 | 2.1902 | 0.6470 |
| Drinking | 0.9204 | 0.3286 | 2.5784 | 0.8747 |
| Age | 1.4636 | 0.6350 | 3.3734 | 0.3713 |
| Grading | 1.4347 | 0.5838 | 3.5259 | 0.4315 |
| Tumor size | 0.0456[ | |||
| T1 | 61.8182 | 3.2625 | 1171.3486 | 0.0060 |
| T2 | 10.8660 | 1.6237 | 72.7161 | 0.0139 |
| T3 | 17.3644 | 0.6132 | 491.7257 | 0.0943 |
| Nodal status | 0.7779 | |||
| Negative | 1.0067 | 0.1147 | 8.8342 | 0.9952 |
| Positive | 1.6820 | 0.3030 | 9.3381 | 0.5522 |
| Tumor stage | 0.0191[ | |||
| 1 | 0.0049 | 0.0002 | 0.1463 | 0.0021 |
| 2 | 0.0740 | 0.0067 | 0.8171 | 0.0336 |
| 3 | 0.0449 | 0.0038 | 0.5359 | 0.0142 |
P<0.05. OSCC, OR, odds ratio; CI, confidence interval.