Literature DB >> 29812908

Minimalist Prion-Inspired Polar Self-Assembling Peptides.

Marta Díaz-Caballero1, Susanna Navarro1, Isabel Fuentes2, Francesc Teixidor2, Salvador Ventura1.   

Abstract

Nature provides copious examples of self-assembling supramolecular nanofibers. Among them, amyloid structures have found amazing applications as advanced materials in fields such as biomedicine and nanotechnology. Prions are a singular subset of proteins able to switch between a soluble conformation and an amyloid state. The ability to transit between these two conformations is encoded in the so-called prion domains (PrDs), which are long and disordered regions of low complexity, enriched in polar and uncharged amino acids such as Gln, Asn, Tyr, Ser, and Gly. The polar nature of PrDs results in slow amyloid formation, which allows kinetic control of fiber assembly. This approach has been exploited for fabrication of multifunctional materials because in contrast to most amyloids, PrDs lack hydrophobic stretches that can nucleate their aggregation, their assembly depends on the establishment of a large number of weak interactions along the complete domain. The length and low complexity of PrDs make their chemical synthesis for applied purposed hardly affordable. Here, we designed four minimalist polar binary patterned peptides inspired in PrDs, which include the [Q/N/G/S]-Y-[Q/N/G/S] motif frequently observed in these domains: NYNYNYN, QYQYQYQ, SYSYSYS, and GYGYGYG. Despite their small size, they all recapitulate the properties of full-length PrDs, self-assembling into nontoxic amyloids under physiological conditions. Thus, they constitute small building blocks for the construction of tailored prion-inspired nanostructures. We exploited Tyr residues in these peptides to generate highly stable dityrosine cross-linked assemblies for the immobilization of metal nanoparticles in the fibrils surface and to develop an electrocatalytic amyloid scaffold. Moreover, we show that the shorter and more polar NYNNYN, QYQQYQ, and SYSSYS hexapeptides also self-assemble into amyloid-like structures, consistent with the presence of these tandem motifs in human prion-like proteins.

Entities:  

Keywords:  amyloid fibrils; low complexity sequences; nanomaterials.; prion domain; self-assembly; short peptides

Mesh:

Substances:

Year:  2018        PMID: 29812908     DOI: 10.1021/acsnano.8b00417

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  13 in total

Review 1.  Prion-based nanomaterials and their emerging applications.

Authors:  Marta Díaz-Caballero; Maria Rosario Fernández; Susanna Navarro; Salvador Ventura
Journal:  Prion       Date:  2018-10-02       Impact factor: 3.931

2.  Detection of Protein Aggregation in Live Plasmodium Parasites.

Authors:  Arnau Biosca; Inés Bouzón-Arnáiz; Lefteris Spanos; Inga Siden-Kiamos; Valentín Iglesias; Salvador Ventura; Xavier Fernàndez-Busquets
Journal:  Antimicrob Agents Chemother       Date:  2020-05-21       Impact factor: 5.191

Review 3.  Current Understanding of the Structure, Stability and Dynamic Properties of Amyloid Fibrils.

Authors:  Eri Chatani; Keisuke Yuzu; Yumiko Ohhashi; Yuji Goto
Journal:  Int J Mol Sci       Date:  2021-04-21       Impact factor: 5.923

4.  pH-Dependent Aggregation in Intrinsically Disordered Proteins Is Determined by Charge and Lipophilicity.

Authors:  Jaime Santos; Valentín Iglesias; Juan Santos-Suárez; Marco Mangiagalli; Stefania Brocca; Irantzu Pallarès; Salvador Ventura
Journal:  Cells       Date:  2020-01-08       Impact factor: 6.600

5.  Prion domains as a driving force for the assembly of functional nanomaterials.

Authors:  Weiqiang Wang; Salvador Ventura
Journal:  Prion       Date:  2020-12       Impact factor: 3.931

Review 6.  Relevance of Electrostatic Charges in Compactness, Aggregation, and Phase Separation of Intrinsically Disordered Proteins.

Authors:  Greta Bianchi; Sonia Longhi; Rita Grandori; Stefania Brocca
Journal:  Int J Mol Sci       Date:  2020-08-27       Impact factor: 5.923

Review 7.  Peptide-Protein Interactions: From Drug Design to Supramolecular Biomaterials.

Authors:  Andrea Caporale; Simone Adorinni; Doriano Lamba; Michele Saviano
Journal:  Molecules       Date:  2021-02-25       Impact factor: 4.411

Review 8.  Amyloids as Building Blocks for Macroscopic Functional Materials: Designs, Applications and Challenges.

Authors:  Jingyao Li; Fuzhong Zhang
Journal:  Int J Mol Sci       Date:  2021-10-02       Impact factor: 6.208

9.  Atomistic fibrillar architectures of polar prion-inspired heptapeptides.

Authors:  Francesca Peccati; Marta Díaz-Caballero; Susanna Navarro; Luis Rodríguez-Santiago; Salvador Ventura; Mariona Sodupe
Journal:  Chem Sci       Date:  2020-11-02       Impact factor: 9.825

Review 10.  Prion-like proteins: from computational approaches to proteome-wide analysis.

Authors:  Marcos Gil-Garcia; Valentín Iglesias; Irantzu Pallarès; Salvador Ventura
Journal:  FEBS Open Bio       Date:  2021-06-17       Impact factor: 2.693

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