Literature DB >> 29804207

Complete Genome Sequence of Cd(II)-Resistant Arthrobacter sp. PGP41, a Plant Growth-Promoting Bacterium with Potential in Microbe-Assisted Phytoremediation.

Xihui Xu1, Meng Xu1, Qiming Zhao1, Yan Xia1, Chen Chen2, Zhenguo Shen1.   

Abstract

Microbe-assisted phytoremediation has great potential for practical applications. Plant growth-promoting bacteria (PGPB) with heavy metal (HM) resistance are important for the implementation of PGPB-assisted phytoremediation of HM-contaminated environments. Arthrobacter sp. PGP41 is a Cd(II)-resistant bacterium isolated from the rhizosphere soils of a Cd(II) hyperaccumulator plant, Solanum nigrum. Strain PGP41 can significantly improve plant seedling and root growth under Cd(II) stress conditions. This bacterium exhibited the ability to produce high levels of indole-3-acetic acid (IAA), as well as the ability to fix nitrogen and solubilize phosphate, and it possessed 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity. Here, we present the complete genome sequence of strain PGP41. The genome consists of a single chromosome with a G+C content of 65.38% and no plasmids. The genome encodes 3898 genes and contains 49 tRNA and 12 rRNA genes. Multiple genes associated with plant growth promotion were identified in the genome. The whole genome sequence of PGP41 provides information useful for further clarifying the molecular mechanisms behind plant growth promotion by PGPB and facilitates its potential use as an inoculum in the bioremediation of HM-contaminated environments.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29804207     DOI: 10.1007/s00284-018-1515-z

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  30 in total

Review 1.  Regulation of antibiotic production in root-colonizing Peudomonas spp. and relevance for biological control of plant disease.

Authors:  Dieter Haas; Christoph Keel
Journal:  Annu Rev Phytopathol       Date:  2003-04-29       Impact factor: 13.078

Review 2.  Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils.

Authors:  Y Ma; M N V Prasad; M Rajkumar; H Freitas
Journal:  Biotechnol Adv       Date:  2010-12-13       Impact factor: 14.227

Review 3.  Removal of heavy metal ions from wastewaters: a review.

Authors:  Fenglian Fu; Qi Wang
Journal:  J Environ Manage       Date:  2010-12-08       Impact factor: 6.789

4.  COLORIMETRIC ESTIMATION OF INDOLEACETIC ACID.

Authors:  S A Gordon; R P Weber
Journal:  Plant Physiol       Date:  1951-01       Impact factor: 8.340

5.  SOAP2: an improved ultrafast tool for short read alignment.

Authors:  Ruiqiang Li; Chang Yu; Yingrui Li; Tak-Wah Lam; Siu-Ming Yiu; Karsten Kristiansen; Jun Wang
Journal:  Bioinformatics       Date:  2009-06-03       Impact factor: 6.937

6.  The role of citric acid on the phytoremediation of heavy metal contaminated soil.

Authors:  Y X Chen; Q Lin; Y M Luo; Y F He; S J Zhen; Y L Yu; G M Tian; M H Wong
Journal:  Chemosphere       Date:  2003-02       Impact factor: 7.086

7.  Characterization of plant growth promoting rhizobacteria isolated from polluted soils and containing 1-aminocyclopropane-1-carboxylate deaminase.

Authors:  A A Belimov; V I Safronova; T A Sergeyeva; T N Egorova; V A Matveyeva; V E Tsyganov; A Y Borisov; I A Tikhonovich; C Kluge; A Preisfeld; K J Dietz; V V Stepanok
Journal:  Can J Microbiol       Date:  2001-07       Impact factor: 2.419

8.  Isolation of plant-growth-promoting and metal-resistant cultivable bacteria from Arthrocnemum macrostachyum in the Odiel marshes with potential use in phytoremediation.

Authors:  S Navarro-Torre; E Mateos-Naranjo; M A Caviedes; E Pajuelo; I D Rodríguez-Llorente
Journal:  Mar Pollut Bull       Date:  2016-06-25       Impact factor: 5.553

9.  Comparative genomic analysis and phenazine production of Pseudomonas chlororaphis, a plant growth-promoting rhizobacterium.

Authors:  Yawen Chen; Xuemei Shen; Huasong Peng; Hongbo Hu; Wei Wang; Xuehong Zhang
Journal:  Genom Data       Date:  2015-01-22

10.  Identification of ribosomal RNA genes in metagenomic fragments.

Authors:  Ying Huang; Paul Gilna; Weizhong Li
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

View more
  4 in total

1.  Genome Sequence of Arthrobacter sp. UKPF54-2, a Plant Growth-Promoting Rhizobacterial Strain Isolated from Paddy Soil.

Authors:  Weishou Shen; Xinchun Yu; Nan Gao; Sayuri Ota; Yutaka Shiratori; Tomoyasu Nishizawa; Kazuo Isobe; Xinhua He; Keishi Senoo
Journal:  Microbiol Resour Announc       Date:  2019-11-07

2.  Long-term effect of epigenetic modification in plant-microbe interactions: modification of DNA methylation induced by plant growth-promoting bacteria mediates promotion process.

Authors:  Chen Chen; Miao Wang; Jingzhi Zhu; Yongwei Tang; Hanchao Zhang; Qiming Zhao; Minyu Jing; Yahua Chen; Xihui Xu; Jiandong Jiang; Zhenguo Shen
Journal:  Microbiome       Date:  2022-02-24       Impact factor: 14.650

3.  Enhancing the Phytoremediation of Heavy Metals by Combining Hyperaccumulator and Heavy Metal-Resistant Plant Growth-Promoting Bacteria.

Authors:  Yong Zhang; Shangjun Zhao; Sijia Liu; Jing Peng; Hanchao Zhang; Qiming Zhao; Luqing Zheng; Yahua Chen; Zhenguo Shen; Xihui Xu; Chen Chen
Journal:  Front Plant Sci       Date:  2022-06-02       Impact factor: 6.627

4.  Streptomyces sp. strain TOR3209: a rhizosphere bacterium promoting growth of tomato by affecting the rhizosphere microbial community.

Authors:  Dong Hu; Shuhong Li; Ying Li; Jieli Peng; Xiaoyan Wei; Jia Ma; Cuimian Zhang; Nan Jia; Entao Wang; Zhanwu Wang
Journal:  Sci Rep       Date:  2020-11-18       Impact factor: 4.379

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.