| Literature DB >> 29799568 |
Yiji Tu1, William Charles Lineaweaver2, Feng Zhang1,2.
Abstract
BACKGROUND: Keloid disease (KD) is common and often refractory to treatment. Definition of the genetic mechanisms of KD can lead to a better understanding of the disease and suggest more effective treatment strategies.Entities:
Keywords: disease susceptibility; genetic model; genetics; keloid; single nucleotide polymorphism; transforming growth factor-beta1
Year: 2017 PMID: 29799568 PMCID: PMC5965324 DOI: 10.1177/2059513117709943
Source DB: PubMed Journal: Scars Burn Heal ISSN: 2059-5131
Figure 1.Process of study selection and the reasons for exclusion.
Characteristics and methodological quality.
| Author and year | Ethnicity | Type | Group size (cases/controls) | Control | SNP Detection | DNA source | Quality |
|---|---|---|---|---|---|---|---|
| Bayat (2003)[ | Caucasian | Case-control | 100/200 | CC | PCR-RFLP | Blood | 7/9 |
| Emami (2012)[ | Malay | Case-control | 100/100 | CC | PCR-RFLP | Blood | 7/9 |
| Kulawczuk (2014)[ | Polish | Case-control | 36/37 | HC | PCR-RFLP | Mucosa | 5/9 |
| Song (2014)[ | Chinese | Case-control | 169/119 | CC | PCR-RFLP | Blood | 8/9 |
| Xie (2015)[ | Chinese | Case-control | 159/164 | HC | PCR-RFLP | Blood | 6/9 |
CC, community control; HC, hospital control; PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism SNP, single nucleotide polymorphism.
Allele and genotype frequency.
| Author and year | Cases | Controls | HWE test | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. | C | T | CC | CT | TT | No. | C | T | CC | CT | TT |
| ||
| Bayat (2003)[ | 100 | 130 | 70 | 46 | 38 | 16 | 200 | 272 | 128 | 94 | 84 | 22 | 0.244 | 0.621 |
| Emami (2012)[ | 100 | 110 | 90 | 30 | 50 | 20 | 100 | 118 | 82 | 35 | 48 | 17 | 0.006 | 0.937 |
| Kulawczuk (2014)[ | 36 | 50 | 22 | 18 | 14 | 4 | 37 | 37 | 37 | 9 | 19 | 9 | 0.027 | 0.869 |
| Song (2014)[ | 169 | 155 | 183 | 38 | 79 | 52 | 119 | 130 | 108 | 39 | 52 | 28 | 1.672 | 0.196 |
| Xie (2015)[ | 159 | 156 | 162 | 46 | 64 | 49 | 164 | 134 | 194 | 30 | 74 | 60 | 0.721 | 0.396 |
HWE, Hardy–Weinberg equilibrium.
Overall and subgroup meta-analyses.
| Genetic models and subgroups | Studies (n) | Association | Heterogeneity | Model of meta-analysis | Publication bias
( | ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) | I2 (%) | ||||||
| C vs. T | 5 | 1.00 (0.85–1.18) | 0.99 | 74 | 0.004 | Random | 0.458 |
| Chinese | 2 | 1.01 (0.81–1.27) | 0.91 | 88 | 0.003 | Random | |
| Non-Chinese | 3 | 0.99 (0.77–1.26) | 0.91 | 71 | 0.03 | Random | |
| Group size ⩾ 200 | 4 | 0.95 (0.80–1.13) | 0.54 | 68 | 0.02 | Random | |
| Group size < 200 | 1 | NA | NA | NA | NA | NA | |
| DNA from blood | 4 | 0.95 (0.80–1.13) | 0.54 | 68 | 0.02 | Random | |
| DNA from mucosa | 1 | NA | NA | NA | NA | NA | |
| High quality | 3 | 0.80 (0.65–0.98) | 0.03 | 0 | 0.64 | Fixed | |
| Moderate quality | 2 | 1.52 (1.15–2.01) | 0.004 | 39 | 0.2 | Fixed | |
| CT vs. TT | 5 | 0.90 (0.67–1.22) | 0.5 | 0 | 0.7 | Fixed | 0.757 |
| Chinese | 2 | 0.95 (0.65–1.38) | 0.78 | 0 | 0.51 | Fixed | |
| Non-Chinese | 3 | 0.83 (0.51–1.36) | 0.46 | 0 | 0.45 | Fixed | |
| Group size ⩾ 200 | 4 | 0.87 (0.64–1.19) | 0.39 | 0 | 0.71 | Fixed | |
| Group size < 200 | 1 | NA | NA | NA | NA | NA | |
| DNA from blood | 4 | 0.87 (0.64–1.19) | 0.39 | 0 | 0.71 | Fixed | |
| DNA from mucosa | 1 | NA | NA | NA | NA | NA | |
| High quality | 3 | 0.78 (0.52–1.15) | 0.21 | 0 | 0.79 | Fixed | |
| Moderate quality | 2 | 1.12 (0.70–1.79) | 0.64 | 0 | 0.55 | Fixed | |
| CC vs. TT | 5 | 0.90 (0.67–1.22) | 0.91 | 72 | 0.007 | Random | 0.573 |
| Chinese | 2 | 1.00 (0.29–3.48) | 1 | 88 | 0.004 | Random | |
| Non-Chinese | 3 | 1.08 (0.43–2.72) | 0.87 | 65 | 0.06 | Random | |
| Group size ⩾ 200 | 4 | 0.85 (0.46–1.57) | 0.6 | 68 | 0.02 | Random | |
| Group size < 200 | 1 | NA | NA | NA | NA | NA | |
| DNA from blood | 4 | 0.85 (0.46–1.57) | 0.6 | 68 | 0.02 | Random | |
| DNA from mucosa | 1 | NA | NA | NA | NA | NA | |
| High quality | 3 | 0.62 (0.41–0.94) | 0.02 | 0 | 0.79 | Fixed | |
| Moderate quality | 2 | 2.14 (1.24–3.70) | 0.02 | 19 | 0.27 | Fixed | |
| CC+CT vs. TT | 5 | 0.95 (0.72–1.25) | 0.69 | 40 | 0.15 | Fixed | 0.739 |
| Chinese | 2 | 0.99 (0.70–1.40) | 0.94 | 67 | 0.08 | Random | |
| Non-Chinese | 3 | 0.87 (0.55–1.39) | 0.57 | 42 | 0.18 | Fixed | |
| Group size ⩾ 200 | 4 | 0.90 (0.67–1.19) | 0.45 | 29 | 0.24 | Fixed | |
| Group size < 200 | 1 | NA | NA | NA | NA | NA | |
| DNA from blood | 4 | 0.90 (0.67–1.19) | 0.45 | 29 | 0.24 | Fixed | |
| DNA from mucosa | 1 | NA | NA | NA | NA | NA | |
| High quality | 3 | 0.71 (0.49–1.02) | 0.07 | 0 | 0.89 | Fixed | |
| Moderate quality | 2 | 1.41 (0.91–2.17) | 0.12 | 0 | 0.32 | Fixed | |
| CC vs. CT+TT | 5 | 1.05 (0.82–1.35) | 0.71 | 72 | 0.007 | Random | 0.372 |
| Chinese | 2 | 1.05 (0.73–1.51) | 0.79 | 89 | 0.003 | Random | |
| Non-Chinese | 3 | 1.05 (0.74–1.48) | 0.79 | 64 | 0.06 | Random | |
| Group size ⩾ 200 | 4 | 0.97 (0.75–1.26) | 0.81 | 68 | 0.03 | Random | |
| Group size < 200 | 1 | NA | NA | NA | NA | NA | |
| DNA from blood | 4 | 0.97 (0.75–1.26) | 0.81 | 68 | 0.03 | Random | |
| DNA from mucosa | 1 | NA | NA | NA | NA | NA | |
| High quality | 3 | 0.78 (0.57–1.06) | 0.11 | 0 | 0.42 | Fixed | |
| Moderate quality | 2 | 2.04 (1.29–3.24) | 0.002 | 0 | 0.35 | Fixed | |
NA, not available.
Figure 2.Subgroup analyses based on study quality under allele comparison (C vs. T).
Figure 3.Subgroup analyses based on study quality under homozygote model (CC vs. TT).
Figure 4.Subgroup analyses based on study quality under recessive model (CC vs. CT+TT).
Meta-regression analyses (P value).
| Genetic model | Ethnicity | Group size | DNA source | Study quality |
|---|---|---|---|---|
| C vs. T | 0.812 | 0.55 | 0.144 | 0.037 |
| CT vs. TT | 0.692 | 0.691 | 0.434 | 0.328 |
| CC vs. TT | 0.899 | 0.564 | 0.17 | 0.039 |
| CC+CT vs. TT | 0.927 | 0.587 | 0.226 | 0.101 |
| CC vs. CT+TT | 0.818 | 0.644 | 0.183 | 0.042 |