Literature DB >> 29797750

Peptide Nucleic Acid Conjugated with Ruthenium-Complex Stabilizing Double-Duplex Invasion Complex Even under Physiological Conditions.

Masaki Hibino1, Yuichiro Aiba1, Yoshihito Watanabe2, Osami Shoji1.   

Abstract

Peptide nucleic acid (PNA) can form a stable duplex with DNA, and, accordingly, directly recognize double-stranded DNA through the formation of a double-duplex invasion complex, wherein a pair of complementary PNA strands form two PNA/DNA duplexes. Because invasion does not require prior denaturation of DNA, PNA holds great potential for in cellulo or in vivo applications. To broaden the applicability of PNA invasion, we developed a new conjugate of PNA with a ruthenium complex. This Ru-PNA conjugate exhibits higher DNA-binding affinity, which results in enhanced invasion efficiency, even under physiological conditions.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA recognition; double-duplex invasion; nucleic acids; peptide nucleic acids; ruthenium

Mesh:

Substances:

Year:  2018        PMID: 29797750     DOI: 10.1002/cbic.201800256

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  5 in total

1.  Impact of non-nucleotidic bulges on recognition of mixed-sequence dsDNA by pyrene-functionalized Invader probes.

Authors:  Dale C Guenther; Raymond G Emehiser; Allison Inskeep; Saswata Karmakar; Patrick J Hrdlicka
Journal:  Org Biomol Chem       Date:  2020-06-24       Impact factor: 3.876

2.  Conformational constraints of cyclopentane peptide nucleic acids facilitate tunable binding to DNA.

Authors:  Hongchao Zheng; Istvan Botos; Victor Clausse; Herman Nikolayevskiy; Elizabeth E Rastede; Munira F Fouz; Sharlyn J Mazur; Daniel H Appella
Journal:  Nucleic Acids Res       Date:  2021-01-25       Impact factor: 16.971

3.  Recognition of double-stranded DNA using LNA-modified toehold Invader probes.

Authors:  Shiva P Adhikari; Philip Vukelich; Dale C Guenther; Saswata Karmakar; Patrick J Hrdlicka
Journal:  Org Biomol Chem       Date:  2021-11-03       Impact factor: 3.876

4.  Nicked Invader probes: multistranded and sequence-unrestricted recognition of double-stranded DNA.

Authors:  Shiva P Adhikari; Saswata Karmakar; Patrick J Hrdlicka
Journal:  Org Biomol Chem       Date:  2022-02-02       Impact factor: 3.876

5.  2-Trifluoromethyl-6-mercurianiline Nucleotide, a Sensitive 19F NMR Probe for Hg(II)-mediated Base Pairing.

Authors:  Asmo Aro-Heinilä; Assi Lepistö; Antti Äärelä; Tuomas Antti Lönnberg; Pasi Virta
Journal:  J Org Chem       Date:  2021-12-14       Impact factor: 4.354

  5 in total

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