Literature DB >> 29797090

Native xylose-inducible promoter expands the genetic tools for the biomass-degrading, extremely thermophilic bacterium Caldicellulosiruptor bescii.

Amanda M Williams-Rhaesa1, Nanaakua K Awuku1, Gina L Lipscomb1, Farris L Poole1, Gabriel M Rubinstein1, Jonathan M Conway2, Robert M Kelly2, Michael W W Adams3.   

Abstract

Regulated control of both homologous and heterologous gene expression is essential for precise genetic manipulation and metabolic engineering of target microorganisms. However, there are often no options available for inducible promoters when working with non-model microorganisms. These include extremely thermophilic, cellulolytic bacteria that are of interest for renewable lignocellulosic conversion to biofuels and chemicals. In fact, improvements to the genetic systems in these organisms often cease once transformation is achieved. This present study expands the tools available for genetically engineering Caldicellulosiruptor bescii, the most thermophilic cellulose-degrader known growing up to 90 °C on unpretreated plant biomass. A native xylose-inducible (P xi ) promoter was utilized to control the expression of the reporter gene (ldh) encoding lactate dehydrogenase. The P xi -ldh construct resulted in a both increased ldh expression (20-fold higher) and lactate dehydrogenase activity (32-fold higher) in the presence of xylose compared to when glucose was used as a substrate. Finally, lactate production during growth of the recombinant C. bescii strain was proportional to the initial xylose concentration, showing that tunable expression of genes is now possible using this xylose-inducible system. This study represents a major step in the use of C. bescii as a potential platform microorganism for biotechnological applications using renewable biomass.

Entities:  

Keywords:  Anaerobes; Biodegradation of cellulosic; Biotechnology of thermophiles; Genetics; Genetics of extremophiles; Molecular biology

Mesh:

Substances:

Year:  2018        PMID: 29797090     DOI: 10.1007/s00792-018-1023-x

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  27 in total

1.  Improved growth media and culture techniques for genetic analysis and assessment of biomass utilization by Caldicellulosiruptor bescii.

Authors:  Joel Farkas; Daehwan Chung; Minseok Cha; Jennifer Copeland; Philip Grayeski; Janet Westpheling
Journal:  J Ind Microbiol Biotechnol       Date:  2012-11-13       Impact factor: 3.346

2.  Sites and specificity of the reaction of bipyridylium compounds with anaerobic respiratory enzymes of Escherichia coli. Effects of permeability barriers imposed by the cytoplasmic membrane.

Authors:  R W Jones; P B Garland
Journal:  Biochem J       Date:  1977-04-15       Impact factor: 3.857

3.  Hydrogenomics of the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus.

Authors:  Harmen J G van de Werken; Marcel R A Verhaart; Amy L VanFossen; Karin Willquist; Derrick L Lewis; Jason D Nichols; Heleen P Goorissen; Emmanuel F Mongodin; Karen E Nelson; Ed W J van Niel; Alfons J M Stams; Donald E Ward; Willem M de Vos; John van der Oost; Robert M Kelly; Servé W M Kengen
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

4.  Multidomain, Surface Layer-associated Glycoside Hydrolases Contribute to Plant Polysaccharide Degradation by Caldicellulosiruptor Species.

Authors:  Jonathan M Conway; William S Pierce; Jaycee H Le; George W Harper; John H Wright; Allyson L Tucker; Jeffrey V Zurawski; Laura L Lee; Sara E Blumer-Schuette; Robert M Kelly
Journal:  J Biol Chem       Date:  2016-01-26       Impact factor: 5.157

5.  Direct conversion of plant biomass to ethanol by engineered Caldicellulosiruptor bescii.

Authors:  Daehwan Chung; Minseok Cha; Adam M Guss; Janet Westpheling
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-02       Impact factor: 11.205

6.  Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction.

Authors:  Jonathan M Conway; Bennett S McKinley; Nathaniel L Seals; Diana Hernandez; Piyum A Khatibi; Suresh Poudel; Richard J Giannone; Robert L Hettich; Amanda M Williams-Rhaesa; Gina L Lipscomb; Michael W W Adams; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2017-12-01       Impact factor: 4.792

7.  Engineering a hyperthermophilic archaeon for temperature-dependent product formation.

Authors:  Mirko Basen; Junsong Sun; Michael W W Adams
Journal:  MBio       Date:  2012-04-17       Impact factor: 7.867

8.  Metabolic engineering of Caldicellulosiruptor bescii yields increased hydrogen production from lignocellulosic biomass.

Authors:  Minseok Cha; Daehwan Chung; James G Elkins; Adam M Guss; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2013-06-03       Impact factor: 6.040

9.  Expression of the Acidothermus cellulolyticus E1 endoglucanase in Caldicellulosiruptor bescii enhances its ability to deconstruct crystalline cellulose.

Authors:  Daehwan Chung; Jenna Young; Minseok Cha; Roman Brunecky; Yannick J Bomble; Michael E Himmel; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2015-08-13       Impact factor: 6.040

10.  Cellulosic ethanol production via consolidated bioprocessing at 75 °C by engineered Caldicellulosiruptor bescii.

Authors:  Daehwan Chung; Minseok Cha; Elise N Snyder; James G Elkins; Adam M Guss; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2015-10-06       Impact factor: 6.040

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  5 in total

Review 1.  Role of extremophiles and their extremozymes in biorefinery process of lignocellulose degradation.

Authors:  Dixita Chettri; Ashwani Kumar Verma; Lija Sarkar; Anil Kumar Verma
Journal:  Extremophiles       Date:  2021-03-25       Impact factor: 2.395

2.  Genome Editing of the Anaerobic Thermophile Thermoanaerobacter ethanolicus Using Thermostable Cas9.

Authors:  Yilin Le; Yu Fu; Jianzhong Sun
Journal:  Appl Environ Microbiol       Date:  2020-12-17       Impact factor: 4.792

Review 3.  The biology and biotechnology of the genus Caldicellulosiruptor: recent developments in 'Caldi World'.

Authors:  Laura L Lee; James R Crosby; Gabriel M Rubinstein; Tunyaboon Laemthong; Ryan G Bing; Christopher T Straub; Michael W W Adams; Robert M Kelly
Journal:  Extremophiles       Date:  2019-07-29       Impact factor: 2.395

4.  The thermophilic biomass-degrading bacterium Caldicellulosiruptor bescii utilizes two enzymes to oxidize glyceraldehyde 3-phosphate during glycolysis.

Authors:  Israel M Scott; Gabriel M Rubinstein; Farris L Poole; Gina L Lipscomb; Gerrit J Schut; Amanda M Williams-Rhaesa; David M Stevenson; Daniel Amador-Noguez; Robert M Kelly; Michael W W Adams
Journal:  J Biol Chem       Date:  2019-05-16       Impact factor: 5.157

Review 5.  Insights into Thermophilic Plant Biomass Hydrolysis from Caldicellulosiruptor Systems Biology.

Authors:  Sara E Blumer-Schuette
Journal:  Microorganisms       Date:  2020-03-10
  5 in total

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