Literature DB >> 29796852

The Draft Genome Sequence of Clostridium sp. Strain NJ4, a Bacterium Capable of Producing Butanol from Inulin Through Consolidated Bioprocessing.

Yujia Jiang1, Jiasheng Lu1, Tianpeng Chen1, Wei Yan1, Weiliang Dong1,2, Jie Zhou1, Wenming Zhang1,2, Jiangfeng Ma1, Min Jiang3,4, Fengxue Xin5,6,7.   

Abstract

A novel butanogenic Clostridium sp. NJ4 was successfully isolated and characterized, which could directly produce relatively high titer of butanol from inulin through consolidated bioprocessing (CBP). The assembled draft genome of strain NJ4 is 4.09 Mp, containing 3891 encoded protein sequences with G+C content of 30.73%. Among these annotated genes, a levanase, a hypothetical inulinase, and two bifunctional alcohol/aldehyde dehydrogenases (AdhE) were found to play key roles in the achievement of ABE production from inulin through CBP.

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Year:  2018        PMID： 29796852     DOI： 10.1007/s00284-018-1513-1

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN： 0343-8651            Impact factor:   2.188


  11 in total

1.  Molecular cloning and expression in Escherichia coli of an exo-levanase gene from the endophytic bacterium Gluconacetobacter diazotrophicus SRT4.

Authors:  Carmen Menéndez; Lázaro Hernández; Guillermo Selman; Milady F Mendoza; Pedro Hevia; Mailin Sotolongo; Juan G Arrieta
Journal:  Curr Microbiol       Date:  2002-07       Impact factor: 2.188

2.  Scaffolding pre-assembled contigs using SSPACE.

Authors:  Marten Boetzer; Christiaan V Henkel; Hans J Jansen; Derek Butler; Walter Pirovano
Journal:  Bioinformatics       Date:  2010-12-12       Impact factor: 6.937

3.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

4.  Simultaneous fermentation of glucose and xylose to butanol by Clostridium sp. strain BOH3.

Authors:  Fengxue Xin; Yi-Rui Wu; Jianzhong He
Journal:  Appl Environ Microbiol       Date:  2014-05-23       Impact factor: 4.792

5.  Purification and characterization of 2,6-beta-D-fructan 6-levanbiohydrolase from Streptomyces exfoliatus F3-2.

Authors:  K Saito; K Kondo; I Kojima; A Yokota; F Tomita
Journal:  Appl Environ Microbiol       Date:  2000-01       Impact factor: 4.792

6.  High-efficient production of biobutanol by a novel Clostridium sp. strain WST with uncontrolled pH strategy.

Authors:  Sabarathinam Shanmugam; Chongran Sun; Xiaoming Zeng; Yi-Rui Wu
Journal:  Bioresour Technol       Date:  2018-02-20       Impact factor: 9.642

7.  Purification and characterization of the Bacillus subtilis levanase produced in Escherichia coli.

Authors:  E Wanker; A Huber; H Schwab
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

8.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

9.  First draft genome sequencing of indole acetic acid producing and plant growth promoting fungus Preussia sp. BSL10.

Authors:  Abdul Latif Khan; Sajjad Asaf; Abdur Rahim Khan; Ahmed Al-Harrasi; Ahmed Al-Rawahi; In-Jung Lee
Journal:  J Biotechnol       Date:  2016-03-16       Impact factor: 3.307

10.  Genomic comparison of Clostridium species with the potential of utilizing red algal biomass for biobutanol production.

Authors:  Chongran Sun; Shuangfei Zhang; Fengxue Xin; Sabarathinam Shanmugam; Yi-Rui Wu
Journal:  Biotechnol Biofuels       Date:  2018-02-15       Impact factor: 6.040
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