Literature DB >> 29796779

Omics Approaches in Sleep-Wake Regulation.

Emma K O'Callaghan1,2, Edward W Green3, Paul Franken4, Valérie Mongrain5,6.   

Abstract

Although sleep seems an obvious and simple behaviour, it is extremely complex involving numerous interactions both at the neuronal and the molecular levels. While we have gained detailed insight into the molecules and neuronal networks responsible for the circadian organization of sleep and wakefulness, the molecular underpinnings of the homeostatic aspect of sleep regulation are still unknown and the focus of a considerable research effort. In the last 20 years, the development of techniques allowing the simultaneous measurement of hundreds to thousands of molecular targets (i.e. 'omics' approaches) has enabled the unbiased study of the molecular pathways regulated by and regulating sleep. In this chapter, we will review how the different omics approaches, including transcriptomics, epigenomics, proteomics, and metabolomics, have advanced sleep research. We present relevant data in the framework of the two-process model in which circadian and homeostatic processes interact to regulate sleep. The integration of the different omics levels, known as 'systems genetics', will eventually lead to a better understanding of how information flows from the genome, to molecules, to networks, and finally to sleep both in health and disease.

Keywords:  Circadian timing system; Epigenomics; Metabolomics; Proteomics; Sleep homeostasis; Transcriptomics

Mesh:

Year:  2019        PMID: 29796779     DOI: 10.1007/164_2018_125

Source DB:  PubMed          Journal:  Handb Exp Pharmacol        ISSN: 0171-2004


  5 in total

1.  Identification of ultrastructural signatures of sleep and wake in the fly brain.

Authors:  Carlos C Flores; Sophia S Loschky; William Marshall; Giovanna Maria Spano; Mariangela Massaro Cenere; Giulio Tononi; Chiara Cirelli
Journal:  Sleep       Date:  2021-09-18       Impact factor: 6.313

Review 2.  The role of sleep and wakefulness in myelin plasticity.

Authors:  Luisa de Vivo; Michele Bellesi
Journal:  Glia       Date:  2019-06-25       Impact factor: 7.452

Review 3.  Recent advances in understanding the genetics of sleep.

Authors:  Maxime Jan; Bruce F O'Hara; Paul Franken
Journal:  F1000Res       Date:  2020-03-27

4.  Sleep-wake-driven and circadian contributions to daily rhythms in gene expression and chromatin accessibility in the murine cortex.

Authors:  Charlotte N Hor; Jake Yeung; Maxime Jan; Yann Emmenegger; Jeffrey Hubbard; Ioannis Xenarios; Felix Naef; Paul Franken
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-27       Impact factor: 11.205

5.  The Effect of Sleep Deprivation and Subsequent Recovery Period on the Synaptic Proteome of Rat Cerebral Cortex.

Authors:  Péter Gulyássy; Katalin Todorov-Völgyi; Vilmos Tóth; Balázs A Györffy; Gina Puska; Attila Simor; Gábor Juhász; László Drahos; Katalin Adrienna Kékesi
Journal:  Mol Neurobiol       Date:  2022-01-05       Impact factor: 5.590

  5 in total

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