| Literature DB >> 29786054 |
Shi-Jun Li1, Qing Ma1, Ying Liu1, Guang-Hai Yao1, Guang-Peng Tang1, Ding-Ming Wang1.
Abstract
Entities:
Mesh:
Year: 2018 PMID: 29786054 PMCID: PMC5987512 DOI: 10.4103/0366-6999.232805
Source DB: PubMed Journal: Chin Med J (Engl) ISSN: 0366-6999 Impact factor: 2.628
Background information and identification results of B. anthracis isolates from epidemic in Wengan County of Guizhou Province, 2013
| Number | Strains | Source | Prefecture | County | Year | Phage lysis | Penicillin inhibition | pXO1 | pXO2 |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 2013001 | Human skin | Zunyi | Wengan | 2013 | + | + | + | + |
| 2 | 2013002 | Soil | Zunyi | Wengan | 2013 | + | + | + | + |
| 3 | 2013003 | Soil | Zunyi | Wengan | 2013 | + | + | + | + |
| 4 | 2013004 | Soil | Zunyi | Wengan | 2013 | + | + | + | + |
| 5 | 2013005 | Soil | Zunyi | Wengan | 2013 | + | + | + | + |
| 6 | Positive control | / | / | / | / | + | + | + | + |
+: Positive; B. anthracis: Bacillus anthracis; /: Unknown.
MLVA profiles of the B. anthracis strains isolated from the epidemic in Wengan County of Guizhou Province, 2013
| Number | Strain | MLVA profiles | |||||||
|---|---|---|---|---|---|---|---|---|---|
| vrrA | vrrB1 | vrrB2 | vrrC1 | vrrC2 | CG3 | pXO1-aat | pXO2-at | ||
| 1 | 2006001 | 313 | 229 | 162 | 581 | 532 | 158 | 132 | 141 |
| 2 | 2006002 | 313 | 229 | 162 | 581 | 532 | 158 | 132 | 141 |
| 3 | 2006003 | 313 | 229 | 162 | 581 | 532 | 158 | 132 | 141 |
| 4 | 2006004 | 313 | 229 | 162 | 581 | 532 | 158 | 132 | 141 |
| 5 | 2006005 | 313 | 229 | 162 | 581 | 532 | 158 | 132 | 141 |
MLVA: Multiple-locus variable-number tandem repeat analysis; B. anthracis: Bacillus anthracis.
Figure 1MLVA analysis results of B. anthracis isolated in Guizhou Province. (A) Relationships of the B. anthracis isolates based on MLVA. The dendrogram based on the MLVA profiles of isolates from the epidemic in Wengan and other regions in Guizhou were constructed using UPGMA (a-e indicates different clusters, respectively). (B) Genetic relationships based on a minimum spanning tree of the five MLVA profiles of B. anthracis isolates. Each circle corresponds to an MLVA profile. The shadow zones in different colors correspond to different clonal complexes. The size of the circle is proportional to the number of isolates. MLVA: Multiple-locus variable-number tandem repeat analysis; UPGMA: Unweighted pair group method analysis.