Literature DB >> 29782144

The Nitro Group as a Masked Electrophile in Covalent Enzyme Inhibition.

Sneha Ray1, Dale F Kreitler2, Andrew M Gulick2, Andrew S Murkin1.   

Abstract

We report the unprecedented reaction between a nitroalkane and an active-site cysteine residue to yield a thiohydroximate adduct. Structural and kinetic evidence suggests the nitro group is activated by conversion to its nitronic acid tautomer within the active site. The nitro group, therefore, shows promise as a masked electrophile in the design of covalent inhibitors targeting binding pockets with appropriately placed cysteine and general acid residues.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29782144      PMCID: PMC6300134          DOI: 10.1021/acschembio.8b00225

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  14 in total

1.  Cysteine is the general base that serves in catalysis by isocitrate lyase and in mechanism-based inhibition by 3-nitropropionate.

Authors:  Margaret M Moynihan; Andrew S Murkin
Journal:  Biochemistry       Date:  2013-12-24       Impact factor: 3.162

2.  Inactivation of succinate dehydrogenase by 3-nitropropionate.

Authors:  C J Coles; D E Edmondson; T P Singer
Journal:  J Biol Chem       Date:  1979-06-25       Impact factor: 5.157

Review 3.  Biology and biochemistry of glucosinolates.

Authors:  Barbara Ann Halkier; Jonathan Gershenzon
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

4.  Inhibition of isocitrate lyase by 3-nitropropionate, a reaction-intermediate analogue.

Authors:  J V Schloss; W W Cleland
Journal:  Biochemistry       Date:  1982-08-31       Impact factor: 3.162

Review 5.  Targeted Covalent Inhibitors for Drug Design.

Authors:  Thomas A Baillie
Journal:  Angew Chem Int Ed Engl       Date:  2016-08-19       Impact factor: 15.336

6.  CYP83b1 is the oxime-metabolizing enzyme in the glucosinolate pathway in Arabidopsis.

Authors:  C H Hansen; L Du; P Naur; C E Olsen; K B Axelsen; A J Hick; J A Pickett; B A Halkier
Journal:  J Biol Chem       Date:  2001-05-01       Impact factor: 5.157

Review 7.  Targeting isocitrate lyase for the treatment of latent tuberculosis.

Authors:  Ram Prasad Bhusal; Ghader Bashiri; Brooke X C Kwai; Jonathan Sperry; Ivanhoe K H Leung
Journal:  Drug Discov Today       Date:  2017-04-27       Impact factor: 7.851

8.  3-Carbanionic substrate analogues bind very tightly to fumarase and aspartase.

Authors:  D J Porter; H J Bright
Journal:  J Biol Chem       Date:  1980-05-25       Impact factor: 5.157

9.  Discovery of phosphonic acid natural products by mining the genomes of 10,000 actinomycetes.

Authors:  Kou-San Ju; Jiangtao Gao; James R Doroghazi; Kwo-Kwang A Wang; Christopher J Thibodeaux; Steven Li; Emily Metzger; John Fudala; Joleen Su; Jun Kai Zhang; Jaeheon Lee; Joel P Cioni; Bradley S Evans; Ryuichi Hirota; David P Labeda; Wilfred A van der Donk; William W Metcalf
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

10.  Mechanism-based inactivator of isocitrate lyases 1 and 2 from Mycobacterium tuberculosis.

Authors:  Truc V Pham; Andrew S Murkin; Margaret M Moynihan; Lawrence Harris; Peter C Tyler; Nishant Shetty; James C Sacchettini; Hsiao-Ling Huang; Thomas D Meek
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-05       Impact factor: 11.205

View more
  5 in total

Review 1.  Inverse Solvent Isotope Effects in Enzyme-Catalyzed Reactions.

Authors:  Patrick L Fernandez; Andrew S Murkin
Journal:  Molecules       Date:  2020-04-21       Impact factor: 4.411

2.  Docking-generated multiple ligand poses for bootstrapping bioactivity classifying Machine Learning: Repurposing covalent inhibitors for COVID-19-related TMPRSS2 as case study.

Authors:  Ma'mon M Hatmal; Omar Abuyaman; Mutasem Taha
Journal:  Comput Struct Biotechnol J       Date:  2021-08-19       Impact factor: 7.271

Review 3.  Flipping the Switch: Innovations in Inducible Probes for Protein Profiling.

Authors:  Sean M McKenna; Ellen M Fay; Joanna F McGouran
Journal:  ACS Chem Biol       Date:  2021-11-15       Impact factor: 5.100

4.  Selective covalent targeting of GPX4 using masked nitrile-oxide electrophiles.

Authors:  John K Eaton; Laura Furst; Richard A Ruberto; Dieter Moosmayer; André Hilpmann; Matthew J Ryan; Katja Zimmermann; Luke L Cai; Michael Niehues; Volker Badock; Anneke Kramm; Sixun Chen; Roman C Hillig; Paul A Clemons; Stefan Gradl; Claire Montagnon; Kiel E Lazarski; Sven Christian; Besnik Bajrami; Roland Neuhaus; Ashley L Eheim; Vasanthi S Viswanathan; Stuart L Schreiber
Journal:  Nat Chem Biol       Date:  2020-03-30       Impact factor: 15.040

5.  2-Aminopyridine Analogs Inhibit Both Enzymes of the Glyoxylate Shunt in Pseudomonas aeruginosa.

Authors:  Alyssa C McVey; Sean Bartlett; Mahmud Kajbaf; Annalisa Pellacani; Viviana Gatta; Päivi Tammela; David R Spring; Martin Welch
Journal:  Int J Mol Sci       Date:  2020-04-03       Impact factor: 5.923

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.