Literature DB >> 29781618

Field Detection of Citrus Huanglongbing Associated with ' Candidatus Liberibacter Asiaticus' by Recombinese Polymerase Amplification within 15 min.

Wenjuan Qian1, Ying Lu2, Youqing Meng2, Zunzhong Ye1, Liu Wang1, Rui Wang1, Qiqi Zheng1, Hui Wu1, Jian Wu1.   

Abstract

' Candidatus Liberibacter asiaticus' (Las) is the most prevalent bacterium associated with huanglongbing, which is one of the most destructive diseases of citrus. In this paper, an extremely rapid and simple method for field detection of Las from leaf samples, based on recombinase polymerase amplification (RPA), is described. Three RPA primer pairs were designed and evaluated. RPA amplification was optimized so that it could be accomplished within 10 min. In combination with DNA crude extraction by a 50-fold dilution after 1 min of grinding in 0.5 M sodium hydroxide and visual detection via fluorescent DNA dye (positive samples display obvious green fluorescence while negative samples remain colorless), the whole detection process can be accomplished within 15 min. The sensitivity and specificity of this RPA-based method were evaluated and were proven to be equal to those of real-time PCR. The reliability of this method was also verified by analyzing field samples.

Entities:  

Keywords:  Candidatus Liberibacter asiaticus; crude DNA extraction; field detection; recombinase polymerase amplification; visual detection

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Year:  2018        PMID: 29781618     DOI: 10.1021/acs.jafc.8b01015

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  2 in total

1.  Development of a recombinase polymerase based isothermal amplification combined with lateral flow assay (HLB-RPA-LFA) for rapid detection of "Candidatus Liberibacter asiaticus".

Authors:  Dilip Kumar Ghosh; Sunil B Kokane; Amol D Kokane; Ashish J Warghane; Manali R Motghare; Sumit Bhose; Ashwani Kumar Sharma; M Krishna Reddy
Journal:  PLoS One       Date:  2018-12-12       Impact factor: 3.240

2.  Development of a reverse transcription recombinase polymerase based isothermal amplification coupled with lateral flow immunochromatographic assay (CTV-RT-RPA-LFICA) for rapid detection of Citrus tristeza virus.

Authors:  Dilip Kumar Ghosh; Sunil B Kokane; Siddarame Gowda
Journal:  Sci Rep       Date:  2020-11-26       Impact factor: 4.379

  2 in total

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