| Literature DB >> 29772399 |
Ratana Tacharoenmuang1, Satoshi Komoto2, Ratigorn Guntapong1, Tomihiko Ide3, Phakapun Singchai1, Sompong Upachai1, Saori Fukuda3, Yumika Yoshida3, Takayuki Murata3, Tetsushi Yoshikawa4, Kriangsak Ruchusatsawat1, Kazushi Motomura5, Naokazu Takeda5, Somchai Sangkitporn1, Koki Taniguchi3.
Abstract
An unusual rotavirus strain, DB2015-066 with the G10P[14] genotype (RVA/Human-wt/THA/DB2015-066/2015/G10P[14]), was detected in a stool sample from a child hospitalized with acute gastroenteritis in Thailand. Here, we sequenced and characterized the full-genome of the strain DB2015-066. On whole genomic analysis, strain DB2015-066 was shown to have a unique genotype constellation: G10-P[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3. The backbone genes of this strain (I2-R2-C2-M2-A3-N2-T6-E2-H3) are commonly found in rotavirus strains from artiodactyls such as cattle. Furthermore, phylogenetic analysis indicated that each of the 11 genes of strain DB2015-066 could be of artiodactyl (likely bovine) origin. Thus, strain DB2015-066 appeared to be derived from through zoonotic transmission of a bovine rotavirus strain. Of note, the VP7 gene of strain DB2015-066 was located in G10 lineage-6 together with ones of bovine and bovine-like rotavirus strains, away from the clusters comprising other G10P[14] strains in G10 lineage-2/4/5/9, suggesting the occurrence of independent bovine-to-human interspecies transmission events. Our observations provide important insights into the origins of rare G10P[14] strains, and into dynamic interactions between artiodactyl and human rotavirus strains.Entities:
Keywords: Bovine origin; G10P[14] strains; Group A rotaviruses; Thailand; Whole genomic analysis; Zoonotic transmission
Mesh:
Year: 2018 PMID: 29772399 DOI: 10.1016/j.meegid.2018.05.009
Source DB: PubMed Journal: Infect Genet Evol ISSN: 1567-1348 Impact factor: 3.342