Literature DB >> 29767749

Association of BRCA2 K3326* With Small Cell Lung Cancer and Squamous Cell Cancer of the Skin.

Thorunn Rafnar1, Gudbjorg R Sigurjonsdottir2, Simon N Stacey1, Gisli Halldorsson1, Patrick Sulem1, Luba M Pardo3, Hannes Helgason1,4, Stefan T Sigurdsson5, Thorkell Gudjonsson5, Laufey Tryggvadottir5,6, Gudridur H Olafsdottir6, Jon G Jonasson7,5, Kristin Alexiusdottir2,6, Asgeir Sigurdsson1, Julius Gudmundsson1, Jona Saemundsdottir1, Jon K Sigurdsson1, Hrefna Johannsdottir1, Andre Uitterlinden8, Sita H Vermeulen9, Tessel E Galesloot9, Dawn C Allain10,11, Martin Lacko12, Bardur Sigurgeirsson13,5, Kristin Thorisdottir13,5, Oskar T Johannsson2, Fridbjorn Sigurdsson2, Gunnar B Ragnarsson2, Helgi Isaksson7, Hronn Hardardottir14, Tomas Gudbjartsson15, Daniel F Gudbjartsson1,16, Gisli Masson1, Lambertus A M L Kiemeney9, Amanda Ewart Toland17,18,19, Tamar Nijsten3, Wilbert H M Peters20, Jon H Olafsson13,5, Steinn Jonsson14, Unnur Thorsteinsdottir1,5, Gudmar Thorleifsson1, Kari Stefansson1,5.   

Abstract

Background: Most pathogenic mutations in the BRCA2 gene carry a high risk of hereditary breast and ovarian cancer (HBOC). However, a stop-gain mutation, K3326* (rs11571833), confers risk of lung cancer and cancers of the upper-aero-digestive tract but only a modest risk of breast or ovarian cancer. The Icelandic population provides an opportunity for comprehensive characterization of the cancer risk profiles of K3326* and HBOC mutations because a single mutation, BRCA2 999del5, is responsible for almost all BRCA2-related HBOC in the population.
Methods: Genotype information on 43 641 cancer patients and 370 971 control subjects from Iceland, the Netherlands, and the United States was used to assess the cancer risk profiles of K3326* and BRCA2 999del5. BRCA2 expression was assessed using RNAseq data from blood (n = 2233), as well as 52 tissues reported in the GTEx database.
Results: The cancer risks associated with K3326* are fundamentally different from those associated with 999del5. We report for the first time an association between K3326* and small cell lung cancer (odds ratio [OR] = 2.06, 95% confidence interval [CI] = 1.35 to 3.16) and squamous cell carcinoma of the skin (OR = 1.69, 95% CI = 1.26 to 2.26). Individuals homozygous for K3326* reach old age and have children. Unlike BRCA2 999del5, the K3326* allele does not affect the level of BRCA2 transcripts, and the allele is expressed to the same extent as the wild-type allele. Conclusions: K3326* associates primarily with cancers that have strong environmental genotoxic risk factors. Expression of the K3326* allele suggests that a variant protein may be made that retains the DNA repair capabilities important to hormone-responsive tissues but may be less efficient in responding to genotoxic stress.

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Year:  2018        PMID: 29767749      PMCID: PMC6136924          DOI: 10.1093/jnci/djy002

Source DB:  PubMed          Journal:  J Natl Cancer Inst        ISSN: 0027-8874            Impact factor:   13.506


  38 in total

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3.  Large-scale whole-genome sequencing of the Icelandic population.

Authors:  Daniel F Gudbjartsson; Hannes Helgason; Sigurjon A Gudjonsson; Florian Zink; Asmundur Oddson; Arnaldur Gylfason; Soren Besenbacher; Gisli Magnusson; Bjarni V Halldorsson; Eirikur Hjartarson; Gunnar Th Sigurdsson; Simon N Stacey; Michael L Frigge; Hilma Holm; Jona Saemundsdottir; Hafdis Th Helgadottir; Hrefna Johannsdottir; Gunnlaugur Sigfusson; Gudmundur Thorgeirsson; Jon Th Sverrisson; Solveig Gretarsdottir; G Bragi Walters; Thorunn Rafnar; Bjarni Thjodleifsson; Einar S Bjornsson; Sigurdur Olafsson; Hildur Thorarinsdottir; Thora Steingrimsdottir; Thora S Gudmundsdottir; Asgeir Theodors; Jon G Jonasson; Asgeir Sigurdsson; Gyda Bjornsdottir; Jon J Jonsson; Olafur Thorarensen; Petur Ludvigsson; Hakon Gudbjartsson; Gudmundur I Eyjolfsson; Olof Sigurdardottir; Isleifur Olafsson; David O Arnar; Olafur Th Magnusson; Augustine Kong; Gisli Masson; Unnur Thorsteinsdottir; Agnar Helgason; Patrick Sulem; Kari Stefansson
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4.  Whole-genome sequence variation, population structure and demographic history of the Dutch population.

Authors: 
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5.  Data quality at the Icelandic Cancer Registry: comparability, validity, timeliness and completeness.

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Authors:  S Thorlacius; G Olafsdottir; L Tryggvadottir; S Neuhausen; J G Jonasson; S V Tavtigian; H Tulinius; H M Ogmundsdottir; J E Eyfjörd
Journal:  Nat Genet       Date:  1996-05       Impact factor: 38.330

7.  BRCA2, but not BRCA1, mutations account for familial ovarian cancer in Iceland: a population-based study.

Authors:  Thorunn Rafnar; Kristrun R Benediktsdottir; Bjarki J Eldon; Thorgeir Gestsson; Hafsteinn Saemundsson; Karl Olafsson; Anna Salvarsdottir; Eirikur Steingrimsson; Steinunn Thorlacius
Journal:  Eur J Cancer       Date:  2004-12       Impact factor: 9.162

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9.  Detection of sharing by descent, long-range phasing and haplotype imputation.

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2.  Association between Breast Cancer and Second Primary Lung Cancer among the Female Population in Taiwan: A Nationwide Population-Based Cohort Study.

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3.  Whole-exome sequencing reveals germline-mutated small cell lung cancer subtype with favorable response to DNA repair-targeted therapies.

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Journal:  Sci Transl Med       Date:  2021-01-27       Impact factor: 17.956

4.  Variants associating with uterine leiomyoma highlight genetic background shared by various cancers and hormone-related traits.

Authors:  Thorunn Rafnar; Bjarni Gunnarsson; Olafur A Stefansson; Patrick Sulem; Andres Ingason; Michael L Frigge; Lilja Stefansdottir; Jon K Sigurdsson; Vinicius Tragante; Valgerdur Steinthorsdottir; Unnur Styrkarsdottir; Simon N Stacey; Julius Gudmundsson; Gudny A Arnadottir; Asmundur Oddsson; Florian Zink; Gisli Halldorsson; Gardar Sveinbjornsson; Ragnar P Kristjansson; Olafur B Davidsson; Anna Salvarsdottir; Asgeir Thoroddsen; Elisabet A Helgadottir; Katrin Kristjansdottir; Orri Ingthorsson; Valur Gudmundsson; Reynir T Geirsson; Ragnheidur Arnadottir; Daniel F Gudbjartsson; Gisli Masson; Folkert W Asselbergs; Jon G Jonasson; Karl Olafsson; Unnur Thorsteinsdottir; Bjarni V Halldorsson; Gudmar Thorleifsson; Kari Stefansson
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5.  Combined analysis of keratinocyte cancers identifies novel genome-wide loci.

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8.  Genome-wide meta-analysis identifies eight new susceptibility loci for cutaneous squamous cell carcinoma.

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