Literature DB >> 29765744

Spontaneous resolution and crystal structure of (2S)-2-(3-nitro-phen-yl)-3-phenyl-2,3,5,6-tetra-hydro-4H-1,3-thia-zin-4-one; crystal structure of rac-2-(4-nitro-phen-yl)-3-phenyl-2,3,5,6-tetra-hydro-4H-1,3-thia-zin-4-one.

Hemant P Yennawar1, Heather G Bradley2, Kristen C Perhonitch2, Haley E Reppert2, Lee J Silverberg2.   

Abstract

The crystal structures of isomeric rac-2-(4-nitro-phen-yl)-3-phenyl-2,3,5,6-tetra-hydro-4H-1,3-thia-zin-4-one (C16H14N2O3S) (1) and (2S)-2-(3-nitro-phen-yl)-3-phenyl-2,3,5,6-tetra-hydro-4H-1,3-thia-zin-4-one (C16H14N2O3S) (2) are reported here. While 1 crystallizes in a centrosymmetric space group, the crystal of 2 chosen for data collection has mol-ecules only with (2S) chirality. This is the result of spontaneous resolution during crystallization, as the synthesis produces a racemic mixture. A crystal with (2R) mol-ecules was also found in the same crystallization vial (structure factors available). The six-membered thia-zine ring in both 1 and 2 displays an envelope conformation with the S atom forming the flap. The aryl rings in both structures adopt an approximate V shape with angles between their planes of 46.97 (14)° in 1 and 58.37 (10)° in 2. In both structures, the mol-ecules form layers in the ab plane. Within such a layer in 1, one of the O atoms of the nitro-phenyl group accepts a C-H⋯O hydrogen bond from the CH group at position 5 of the thia-zine ring of a mol-ecule of opposite chirality, forming chains along the a-axis direction. Each of the thia-zine rings also participate in C-H⋯O bonds with the same carbon atom as above, resulting in chains along the b-axis direction, albeit of monochiral type. Adjacent layers are consolidated along the c-axis direction by pairs of parallel hydrogen bonds (C-H⋯O type) between the nitro-phenyl groups of enanti-omers. In 2, the two C-H⋯O hydrogen bonds contribute to chain formation along the b-axis direction. Weak edge-to-face inter-actions between the aryl groups of neighbouring mol-ecules in 1, and C-H⋯π inter-actions between a thia-zine ring CH group and a phenyl group of a neighboring mol-ecule in 2 are also observed.

Entities:  

Keywords:  1,3-thia­zin-4-one; crystal structure; nitro group; spontaneous resolution

Year:  2018        PMID: 29765744      PMCID: PMC5946966          DOI: 10.1107/S2056989018003444

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Compounds with an N-aryl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one scaffold have been shown to have a wide variety of bioactivities, including anti­fungal (Qu et al., 2013 ▸; Dandia et al., 2004 ▸; Krumkains, 1984 ▸), anti­tubercular (Dandia et al., 2004 ▸), anti­tumor (Chen et al., 2012 ▸), anti­diabetic (Arya et al., 2012 ▸), regulation of plant growth (Krumkains, 1984 ▸), cleavage of DNA (possible anti­tumor) (Dandia et al., 2013 ▸), inhibition of cannabinoid receptor 1 (CB1) (Choi et al., 2008 ▸), and inhibition of angiogenesis (possible treatment of eye disease, neoplasm, arteriosclerosis, arthritis, psoriasis, diabetes, and mellitus) (Chen et al., 2012 ▸). The spontaneous resolution of a racemic solution by direct crystallization to form a conglomerate, a mechanical mixture of separate homochiral crystals, is an uncommon but well-known phenomenon, recognized first by Pasteur in 1848 (Pasteur, 1848 ▸; Jacques et al., 1981 ▸; Eliel & Wilen, 1994 ▸; Pérez-Garcia & Amabilino, 2007 ▸). It has even been used in the production of chiral active pharmaceutical ingredients (Bredikhin & Bredikhina, 2017 ▸). However, the reasons why this occurs with a minority of mol­ecules are not well understood (Pérez-Garcia & Amabilino, 2007 ▸) and have not yet yielded to attempts to predict occurrence (D’Oria, Karanertzanis & Price, 2010 ▸; Pérez-Garcia & Amabilino, 2007 ▸). In this work, we report the spontaneous resolution and crystal structure of (2S)-2-(3-nitro­phen­yl)-3-phenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one, 2. We later collected another crystal from the vial and confirmed that it had the (2R) configuration (identical packing, structure factors available upon request). We also report the racemic (centrosymmetric) structure of the isomeric 2-(4-nitro­phen­yl)-3-phenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one, 1. We have previously reported the crystal structure of rac-2,3-diphenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one (Yennawar & Silverberg, 2014 ▸).

Structural commentary

Both structures 1 and 2 (Figs. 1 ▸ and 2 ▸) exhibit an envelope pucker conformation of the thia­zine ring with the sulfur atom forming the flap. The Cremer & Pople (1975) puckering parameters in 1 are: Q = 0.638 (3) Å, θ = 47.0 (3)°, φ = 339.8 (4)° and in 2: Q = 0.6654 (16) Å, θ = 44.20 (17)°, φ = 353.8 (3)°. The aryl rings in both structures form an approximate V shape with inter-centroid distances of 3.964 (2) and 4.160 (2) Å, and inter­planar angles of 46.97 (14) and 58.37 (10)°, in 1 and 2, respectively.
Figure 1

The mol­ecular structure of 1, with displacement ellipsoids drawn at the 50% probability level.

Figure 2

The mol­ecular structure of 2, with displacement ellipsoids drawn at the 50% probability level.

Supra­molecular features

In both structures, C—H⋯O inter­actions are observed (Tables 1 ▸ and 2 ▸, Figs. 3 ▸ and 4 ▸), resulting in layering of mol­ecules in planes parallel to (001). In each layer of structure 1, one of the oxygen atoms of the nitro­phenyl group accepts a C—H⋯O hydrogen bond from the CH group at position 5 of the thia­zine ring of a mol­ecule of opposite chirality. This results in infinite chains of mixed chirality along the a-axis direction. The second oxygen atom of the nitro­phenyl group also accepts a hydrogen bond from the thia­zine 5-carbon atom, resulting this time in monochiral chains along the b-axis direction. Further, the stacking of layers along the c-axis direction is consolidated by pairs of parallel hydrogen bonds between the nitro­phenyl groups of enanti­omers. In 2, a monochiral structure, the C—H⋯O hydrogen bonds between the chiral carbon atom and the 4-oxygen atom on the neighboring thia­zine ring results in a chain along the b-axis direction. The second hydrogen bond loops back to the second mol­ecule in the reverse direction of the same chain. While weak edge-to-face inter­actions [CgCg distance of 5.340 (3) Å and an inter­planar angle of 84.99 (2)°] between the aryl groups of neighboring mol­ecules is observed in 1, in 2, the 6-carbon atom of the thia­zine ring inter­acts with the phenyl group in a C—H⋯π type inter­action [C4⋯Cg = 3.581 (2) Å].
Table 1

Hydrogen-bond geometry (Å, °) for 1

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3A⋯O2i 0.972.623.405 (4)139
C3—H3B⋯O3ii 0.972.573.253 (5)128
C7—H7⋯O2iii 0.932.503.417 (4)170

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

Hydrogen-bond geometry (Å, °) for 2

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1⋯O1i 0.982.193.158 (2)170
C15—H15⋯O3ii 0.932.583.501 (3)174

Symmetry codes: (i) ; (ii) .

Figure 3

Packing diagram for 1, showing the layering of mol­ecules in the ab plane. Red dotted lines show hydrogen bonds between enanti­omers and blue dotted lines show inter­actions between mol­ecules of same chirality.

Figure 4

Packing diagram for 2, showing the layering of mol­ecules in the ab plane. Blue dotted lines show hydrogen bonds between mol­ecules forming a chain in the b-axis direction and red dotted lines show a loop-back inter­action within each chain.

Database survey

No substanti­ally similar crystal structures were found other than certain ones we have published, including 2,3-diphenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one (Yennawar & Silverberg, 2014 ▸, 2015 ▸), 2-(3-nitro­phen­yl)-3-phenyl-2,3-di­hydro-4H-1,3-benzo­thia­zin-4-one (Yennawar et al., 2013 ▸), and 2-(4-nitro­phen­yl)-3-phenyl-2,3-di­hydro-4H-1,3-benzo­thia­zin-4-one (Yennawar et al., 2015 ▸).

Synthesis and crystallization

General: A two-necked 25 ml round-bottom flask was oven-dried, cooled under N2, and charged with a stir bar and the imine (6 mmol). 3-Mercaptopropionic acid (0.52 ml, 6 mmol) and then 2-methyl­tetra­hydro­furan (2.3 ml) were added and the solution was stirred. Pyridine (1.95 ml, 24 mmol) and finally, 2,4,6-tripropyl-1,3,5,2,4,6-trioxatri­phospho­rinane-2,4,6-trioxide (T3P) in 2-methyl­tetra­hydro­furan (50 weight percent; 7.3 ml, 12 mmol) were added. The reaction was stirred at room temperature and followed by TLC. The mixture was poured into a separatory funnel with di­chloro­methane and distilled water. The layers were separated and the aqueous was then extracted twice with di­chloro­methane. The organics were combined and washed with saturated sodium bicarbonate and then saturated sodium chloride. The organic was dried over sodium sulfate and concentrated under vacuum to give crude product. 2-(4-Nitro­phen­yl)-3-phenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one (1): the crude product was recrystallized from 2-propanol to give a white powder. Yield: 1.397 g (74%). m.p. 410–412 K. Colorless blocks for data collection were grown by slow evaporation from 2-propanol solution. 2-(3-Nitro­phen­yl)-3-phenyl-2,3,5,6-tetra­hydro-4H-1,3-thia­zin-4-one (2): The crude product was recrystallized from 2-propanol to give a yellow powder. Yield: 1.121 g (59%). m.p. 415 K. Colorless blocks were grown by slow evaporation from ethanol solution; the (2S) and (2R) crystals had identical morphology. The stereochemical configuration of individual crystals was identified by solving the crystal structure. After several were found to be (2S), a crystal was found that was (2R).

Refinement

Crystal data, data collection and structure refinement details for both structures 1 and 2 are summarized in Table 3 ▸. The H atoms were placed geometrically and allowed to ride on their parent C atoms during refinement, with C—H distances of 0.93 Å (aromatic), 0.97 Å (methyl­ene) and 0.98 (meth­yl) and with U iso(H) = 1.2U eq(aromatic or methyl­ene C) or 1.5U eq(methyl C). In structure 2, the absolute configuration for the chiral centres in the mol­ecule was determined as (2S) with a Flack absolute structure parameter of 0.09 (7) for 4055 Friedel pairs.
Table 3

Experimental details

  1 2
Crystal data
Chemical formulaC16H14N2O3SC16H14N2O3S
M r 314.35314.35
Crystal system, space groupOrthorhombic, P b c a Orthorhombic, P212121
Temperature (K)298298
a, b, c (Å)15.801 (6), 10.280 (4), 18.460 (7)8.6877 (17), 9.6547 (19), 18.137 (4)
V3)2998.4 (19)1521.3 (5)
Z 84
Radiation typeMo KαMo Kα
μ (mm−1)0.230.23
Crystal size (mm)0.2 × 0.16 × 0.090.21 × 0.19 × 0.18
 
Data collection
DiffractometerBruker SMART CCD area detectorBruker SMART CCD area detector
Absorption correctionMulti-scan (SADABS; Bruker, 2001)Multi-scan (SADABS; Bruker, 2001)
T min, T max 0.154, 0.90.341, 0.9
No. of measured, independent and observed [I > 2σ(I)] reflections26571, 3769, 229714176, 3775, 3144
R int 0.0570.035
(sin θ/λ)max−1)0.6700.667
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.078, 0.216, 1.190.045, 0.121, 1.01
No. of reflections37693775
No. of parameters199199
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.24, −0.480.32, −0.16
Absolute structureFlack (1983), 4055 Friedel pairs
Absolute structure parameter0.09 (7)

Computer programs: SMART and SAINT (Bruker, 2016 ▸), olex2.solve (Bourhis et al., 2015 ▸), SHELXS97 and SHELXL97 (Sheldrick, 2008 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).

Crystal structure: contains datablock(s) 1, 2. DOI: 10.1107/S2056989018003444/hb7733sup1.cif Structure factors: contains datablock(s) 1. DOI: 10.1107/S2056989018003444/hb77331sup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989018003444/hb77331sup4.mol Structure factors: contains datablock(s) 2. DOI: 10.1107/S2056989018003444/hb77332sup3.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989018003444/hb77332sup5.mol Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989018003444/hb77331sup6.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989018003444/hb77332sup7.cml CCDC references: 1826377, 1826376 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H14N2O3SDx = 1.393 Mg m3
Mr = 314.35Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PbcaCell parameters from 3516 reflections
a = 15.801 (6) Åθ = 2.6–27.5°
b = 10.280 (4) ŵ = 0.23 mm1
c = 18.460 (7) ÅT = 298 K
V = 2998.4 (19) Å3Block, colorless
Z = 80.2 × 0.16 × 0.09 mm
F(000) = 1312
Bruker SMART CCD area detector diffractometer3769 independent reflections
Radiation source: fine-focus sealed tube2297 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.057
phi and ω scansθmax = 28.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −20→21
Tmin = 0.154, Tmax = 0.9k = −13→13
26571 measured reflectionsl = −24→23
Refinement on F2Primary atom site location: iterative
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.078Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.216H-atom parameters constrained
S = 1.19w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
3769 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.48 e Å3
Experimental. The data collection nominally covered a full sphere of reciprocal space by a combination of 4 sets of ω scans each set at different φ and/or 2θ angles and each scan (10 s exposure) covering -0.300° degrees in ω. The crystal to detector distance was 5.82 cm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.38874 (16)0.8032 (2)0.80475 (15)0.0493 (7)
H10.34580.87130.79950.059*
C20.32207 (18)0.6103 (3)0.86948 (17)0.0613 (8)
C30.3466 (2)0.6614 (3)0.94234 (17)0.0744 (10)
H3A0.39410.61040.95970.089*
H3B0.29980.64620.97520.089*
C40.3704 (2)0.8027 (4)0.94716 (18)0.0746 (10)
H4A0.39010.82240.99570.090*
H4B0.32120.85620.93730.090*
C50.44572 (15)0.8058 (2)0.73915 (15)0.0446 (6)
C60.42995 (16)0.8917 (2)0.68348 (15)0.0482 (7)
H60.38600.95130.68800.058*
C70.47813 (18)0.8909 (3)0.62117 (15)0.0551 (7)
H70.46740.94950.58390.066*
C80.54241 (16)0.8013 (3)0.61555 (15)0.0525 (7)
C90.56167 (17)0.7155 (3)0.67046 (18)0.0584 (8)
H90.60580.65630.66580.070*
C100.51327 (17)0.7203 (3)0.73259 (16)0.0546 (7)
H100.52620.66500.77090.066*
C110.31097 (16)0.6326 (2)0.73959 (15)0.0488 (7)
C120.24278 (18)0.6965 (3)0.71096 (17)0.0572 (7)
H120.21590.76120.73750.069*
C130.2139 (2)0.6647 (3)0.64262 (19)0.0679 (9)
H130.16720.70780.62350.082*
C140.2530 (2)0.5712 (3)0.6032 (2)0.0747 (10)
H140.23360.55110.55690.090*
C150.3214 (2)0.5062 (3)0.6317 (2)0.0770 (10)
H150.34840.44230.60450.092*
C160.3502 (2)0.5354 (3)0.70058 (19)0.0660 (8)
H160.39550.48990.72040.079*
N10.34542 (14)0.6745 (2)0.80829 (12)0.0514 (6)
N20.59028 (18)0.7939 (3)0.54789 (16)0.0700 (7)
O10.28131 (16)0.5087 (2)0.86495 (14)0.0905 (8)
O20.57444 (17)0.8711 (3)0.49997 (13)0.0870 (8)
O30.6441 (2)0.7111 (3)0.54203 (18)0.1312 (13)
S10.45206 (5)0.83866 (9)0.88301 (4)0.0706 (3)
U11U22U33U12U13U23
C10.0452 (15)0.0467 (14)0.0561 (17)0.0018 (11)0.0019 (12)0.0096 (11)
C20.0498 (16)0.0657 (18)0.068 (2)0.0000 (14)0.0077 (14)0.0223 (16)
C30.065 (2)0.099 (3)0.060 (2)0.0073 (18)0.0096 (16)0.0301 (18)
C40.072 (2)0.100 (3)0.0521 (19)0.0153 (19)0.0029 (16)0.0062 (17)
C50.0395 (13)0.0399 (12)0.0543 (16)−0.0048 (10)−0.0009 (11)0.0045 (11)
C60.0439 (14)0.0458 (13)0.0550 (17)0.0024 (11)−0.0026 (12)0.0079 (12)
C70.0550 (16)0.0586 (16)0.0517 (17)−0.0010 (14)−0.0036 (13)0.0106 (13)
C80.0445 (15)0.0585 (16)0.0545 (17)−0.0061 (12)0.0055 (13)0.0029 (13)
C90.0436 (15)0.0584 (16)0.073 (2)0.0060 (12)0.0027 (14)0.0090 (15)
C100.0481 (15)0.0545 (15)0.0613 (18)0.0053 (13)0.0041 (13)0.0188 (13)
C110.0438 (14)0.0466 (14)0.0559 (17)−0.0038 (11)0.0047 (13)0.0097 (12)
C120.0496 (16)0.0574 (16)0.065 (2)0.0008 (13)−0.0008 (14)−0.0009 (14)
C130.0625 (19)0.0674 (19)0.074 (2)−0.0120 (16)−0.0130 (17)0.0057 (17)
C140.083 (2)0.073 (2)0.069 (2)−0.0263 (19)−0.0012 (19)−0.0034 (18)
C150.086 (3)0.063 (2)0.083 (3)−0.0113 (18)0.012 (2)−0.0183 (18)
C160.0600 (18)0.0513 (16)0.087 (2)0.0032 (14)0.0041 (17)0.0009 (15)
N10.0475 (13)0.0509 (12)0.0558 (15)−0.0010 (10)0.0032 (11)0.0165 (10)
N20.0613 (16)0.0829 (19)0.0657 (19)−0.0036 (15)0.0121 (14)0.0036 (15)
O10.0943 (18)0.0839 (17)0.0934 (19)−0.0271 (14)0.0132 (14)0.0336 (14)
O20.0969 (18)0.1087 (19)0.0554 (15)−0.0039 (15)0.0103 (13)0.0133 (14)
O30.124 (3)0.155 (3)0.115 (3)0.062 (2)0.061 (2)0.030 (2)
S10.0682 (6)0.0868 (6)0.0569 (6)−0.0123 (4)−0.0040 (4)0.0004 (4)
C1—H10.9800C8—C91.378 (4)
C1—C51.509 (4)C8—N21.462 (4)
C1—N11.491 (3)C9—H90.9300
C1—S11.795 (3)C9—C101.379 (4)
C2—C31.495 (5)C10—H100.9300
C2—N11.359 (3)C11—C121.368 (4)
C2—O11.230 (4)C11—C161.379 (4)
C3—H3A0.9700C11—N11.446 (4)
C3—H3B0.9700C12—H120.9300
C3—C41.503 (5)C12—C131.381 (4)
C4—H4A0.9700C13—H130.9300
C4—H4B0.9700C13—C141.355 (5)
C4—S11.790 (3)C14—H140.9300
C5—C61.378 (4)C14—C151.375 (5)
C5—C101.388 (4)C15—H150.9300
C6—H60.9300C15—C161.384 (4)
C6—C71.379 (4)C16—H160.9300
C7—H70.9300N2—O21.215 (3)
C7—C81.375 (4)N2—O31.208 (4)
C5—C1—H1108.7C9—C8—N2118.7 (3)
C5—C1—S1108.04 (18)C8—C9—H9121.1
N1—C1—H1108.7C8—C9—C10117.8 (3)
N1—C1—C5109.0 (2)C10—C9—H9121.1
N1—C1—S1113.65 (17)C5—C10—H10119.3
S1—C1—H1108.7C9—C10—C5121.4 (3)
N1—C2—C3120.4 (3)C9—C10—H10119.3
O1—C2—C3119.7 (3)C12—C11—C16120.0 (3)
O1—C2—N1119.9 (3)C12—C11—N1119.5 (2)
C2—C3—H3A108.0C16—C11—N1120.3 (3)
C2—C3—H3B108.0C11—C12—H12120.0
C2—C3—C4117.2 (2)C11—C12—C13120.0 (3)
H3A—C3—H3B107.2C13—C12—H12120.0
C4—C3—H3A108.0C12—C13—H13119.7
C4—C3—H3B108.0C14—C13—C12120.5 (3)
C3—C4—H4A109.7C14—C13—H13119.7
C3—C4—H4B109.7C13—C14—H14120.1
C3—C4—S1109.9 (2)C13—C14—C15119.8 (3)
H4A—C4—H4B108.2C15—C14—H14120.1
S1—C4—H4A109.7C14—C15—H15119.8
S1—C4—H4B109.7C14—C15—C16120.3 (3)
C6—C5—C1120.1 (2)C16—C15—H15119.8
C6—C5—C10118.7 (2)C11—C16—C15119.3 (3)
C10—C5—C1121.2 (2)C11—C16—H16120.3
C5—C6—H6119.4C15—C16—H16120.3
C5—C6—C7121.2 (2)C2—N1—C1126.3 (3)
C7—C6—H6119.4C2—N1—C11118.8 (2)
C6—C7—H7120.8C11—N1—C1113.49 (19)
C8—C7—C6118.3 (3)O2—N2—C8118.8 (3)
C8—C7—H7120.8O3—N2—C8118.5 (3)
C7—C8—C9122.4 (3)O3—N2—O2122.7 (3)
C7—C8—N2118.8 (3)C4—S1—C195.08 (15)
C1—C5—C6—C7−176.2 (2)C12—C11—N1—C1−69.7 (3)
C1—C5—C10—C9175.0 (3)C12—C11—N1—C297.7 (3)
C2—C3—C4—S1−54.0 (4)C12—C13—C14—C150.8 (5)
C3—C2—N1—C1−5.9 (4)C13—C14—C15—C160.3 (5)
C3—C2—N1—C11−171.6 (3)C14—C15—C16—C11−1.7 (5)
C3—C4—S1—C163.8 (2)C16—C11—C12—C13−0.9 (4)
C5—C1—N1—C2147.8 (3)C16—C11—N1—C1105.6 (3)
C5—C1—N1—C11−45.9 (3)C16—C11—N1—C2−87.0 (3)
C5—C1—S1—C4−171.67 (19)N1—C1—C5—C6115.7 (3)
C5—C6—C7—C80.4 (4)N1—C1—C5—C10−62.5 (3)
C6—C5—C10—C9−3.3 (4)N1—C1—S1—C4−50.6 (2)
C6—C7—C8—C9−1.9 (4)N1—C2—C3—C420.1 (4)
C6—C7—C8—N2176.0 (3)N1—C11—C12—C13174.4 (2)
C7—C8—C9—C100.7 (4)N1—C11—C16—C15−173.3 (3)
C7—C8—N2—O23.4 (4)N2—C8—C9—C10−177.1 (3)
C7—C8—N2—O3−176.7 (3)O1—C2—C3—C4−160.7 (3)
C8—C9—C10—C51.9 (4)O1—C2—N1—C1174.9 (3)
C9—C8—N2—O2−178.6 (3)O1—C2—N1—C119.3 (4)
C9—C8—N2—O31.3 (4)S1—C1—C5—C6−120.4 (2)
C10—C5—C6—C72.1 (4)S1—C1—C5—C1061.4 (3)
C11—C12—C13—C14−0.5 (5)S1—C1—N1—C227.3 (3)
C12—C11—C16—C151.9 (4)S1—C1—N1—C11−166.44 (18)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O2i0.972.623.405 (4)139
C3—H3B···O3ii0.972.573.253 (5)128
C7—H7···O2iii0.932.503.417 (4)170
C16H14N2O3SDx = 1.373 Mg m3
Mr = 314.35Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 1695 reflections
a = 8.6877 (17) Åθ = 2.6–27.4°
b = 9.6547 (19) ŵ = 0.23 mm1
c = 18.137 (4) ÅT = 298 K
V = 1521.3 (5) Å3Block, colorless
Z = 40.21 × 0.19 × 0.18 mm
F(000) = 656
Bruker SMART CCD area detector diffractometer3775 independent reflections
Radiation source: fine-focus sealed tube3144 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
Detector resolution: 8.34 pixels mm-1θmax = 28.3°, θmin = 2.3°
phi and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker, 2001)k = −12→12
Tmin = 0.341, Tmax = 0.9l = −24→22
14176 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.121w = 1/[σ2(Fo2) + (0.0783P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
3775 reflectionsΔρmax = 0.32 e Å3
199 parametersΔρmin = −0.16 e Å3
0 restraintsAbsolute structure: Flack (1983), 4055 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.09 (7)
Experimental. The data collection nominally covered a full sphere of reciprocal space by a combination of 4 sets of ω scans each set at different φ and/or 2θ angles and each scan (10 s exposure) covering -0.300° degrees in ω. The crystal to detector distance was 5.82 cm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.26199 (19)0.53305 (17)0.75480 (10)0.0468 (4)
H10.18850.60660.74260.056*
C20.0844 (3)0.3448 (2)0.79727 (12)0.0640 (5)
C30.0753 (3)0.4045 (3)0.87435 (13)0.0688 (6)
H3A−0.03210.40530.88890.083*
H3B0.12830.34130.90730.083*
C40.1385 (2)0.5458 (2)0.88739 (13)0.0685 (6)
H4A0.14350.56380.94000.082*
H4B0.07100.61430.86530.082*
C50.39844 (19)0.54561 (17)0.70401 (10)0.0462 (4)
C60.3973 (2)0.64968 (18)0.65124 (11)0.0499 (4)
H60.31330.70890.64700.060*
C70.5226 (2)0.6638 (2)0.60521 (11)0.0535 (5)
C80.6496 (2)0.5792 (2)0.60899 (13)0.0614 (5)
H80.73260.59130.57730.074*
C90.6499 (2)0.4757 (2)0.66142 (14)0.0648 (6)
H90.73430.41680.66530.078*
C100.5258 (2)0.45870 (19)0.70826 (12)0.0546 (5)
H100.52740.38810.74310.066*
C110.17339 (19)0.34283 (18)0.67247 (10)0.0464 (4)
C120.0949 (2)0.4149 (2)0.61946 (11)0.0541 (4)
H120.04560.49730.63150.065*
C130.0889 (3)0.3649 (3)0.54785 (13)0.0697 (6)
H130.03600.41360.51160.084*
C140.1617 (3)0.2433 (3)0.53116 (13)0.0784 (8)
H140.15740.20880.48330.094*
C150.2404 (3)0.1724 (3)0.58378 (16)0.0748 (7)
H150.29020.09030.57150.090*
C160.2472 (2)0.2211 (2)0.65527 (13)0.0601 (5)
H160.30090.17230.69120.072*
N10.18311 (17)0.39713 (15)0.74654 (8)0.0473 (3)
N20.5185 (3)0.7744 (2)0.54921 (11)0.0695 (5)
O10.0060 (2)0.2427 (2)0.78250 (10)0.1044 (8)
O20.6279 (3)0.7859 (2)0.50693 (12)0.1032 (7)
O30.4078 (2)0.8498 (2)0.54701 (13)0.0971 (7)
S10.32852 (6)0.56010 (6)0.84780 (3)0.06274 (17)
U11U22U33U12U13U23
C10.0395 (8)0.0424 (9)0.0586 (10)0.0006 (7)−0.0046 (8)0.0003 (8)
C20.0585 (11)0.0712 (13)0.0624 (12)−0.0210 (11)0.0031 (10)−0.0021 (10)
C30.0573 (11)0.0877 (16)0.0613 (12)−0.0131 (12)0.0106 (9)−0.0027 (11)
C40.0561 (11)0.0838 (15)0.0655 (12)−0.0010 (11)0.0092 (10)−0.0206 (12)
C50.0399 (8)0.0400 (8)0.0587 (10)−0.0030 (7)−0.0068 (7)−0.0026 (8)
C60.0473 (8)0.0417 (9)0.0606 (11)−0.0030 (7)−0.0123 (9)−0.0026 (8)
C70.0648 (11)0.0428 (9)0.0529 (11)−0.0117 (9)−0.0069 (9)−0.0005 (8)
C80.0599 (11)0.0527 (11)0.0717 (13)−0.0094 (10)0.0122 (10)−0.0040 (10)
C90.0482 (9)0.0530 (11)0.0932 (16)0.0051 (8)0.0087 (11)0.0020 (11)
C100.0489 (9)0.0449 (10)0.0701 (12)0.0015 (8)−0.0016 (9)0.0080 (9)
C110.0377 (7)0.0471 (9)0.0544 (9)−0.0070 (7)−0.0012 (8)−0.0017 (7)
C120.0478 (9)0.0525 (10)0.0621 (11)−0.0027 (8)−0.0081 (9)0.0016 (9)
C130.0786 (14)0.0757 (15)0.0547 (12)−0.0185 (13)−0.0091 (12)0.0099 (11)
C140.0955 (18)0.0839 (17)0.0556 (12)−0.0344 (16)0.0165 (13)−0.0110 (12)
C150.0721 (14)0.0633 (13)0.0891 (17)−0.0018 (12)0.0275 (13)−0.0183 (13)
C160.0514 (10)0.0550 (11)0.0741 (13)0.0058 (9)−0.0007 (10)0.0007 (11)
N10.0431 (7)0.0500 (8)0.0489 (8)−0.0088 (6)−0.0029 (6)−0.0002 (7)
N20.0846 (14)0.0604 (11)0.0637 (11)−0.0208 (11)−0.0131 (10)0.0075 (9)
O10.1126 (16)0.1198 (15)0.0807 (11)−0.0768 (14)0.0227 (11)−0.0220 (11)
O20.133 (2)0.0990 (14)0.0779 (11)−0.0127 (13)0.0272 (13)0.0221 (11)
O30.0867 (12)0.0827 (13)0.1218 (16)−0.0107 (11)−0.0210 (12)0.0455 (12)
S10.0486 (2)0.0780 (4)0.0616 (3)−0.0121 (2)−0.0044 (2)−0.0156 (3)
C1—H10.9800C8—H80.9300
C1—C51.506 (2)C8—C91.380 (3)
C1—N11.488 (2)C9—H90.9300
C1—S11.802 (2)C9—C101.383 (3)
C2—C31.514 (3)C10—H100.9300
C2—N11.356 (3)C11—C121.369 (3)
C2—O11.228 (3)C11—C161.375 (3)
C3—H3A0.9700C11—N11.444 (2)
C3—H3B0.9700C12—H120.9300
C3—C41.490 (3)C12—C131.386 (3)
C4—H4A0.9700C13—H130.9300
C4—H4B0.9700C13—C141.368 (4)
C4—S11.806 (2)C14—H140.9300
C5—C61.388 (3)C14—C151.359 (4)
C5—C101.391 (2)C15—H150.9300
C6—H60.9300C15—C161.380 (4)
C6—C71.379 (3)C16—H160.9300
C7—C81.375 (3)N2—O21.226 (3)
C7—N21.474 (3)N2—O31.207 (3)
C5—C1—H1108.4C9—C8—H8121.1
C5—C1—S1107.96 (11)C8—C9—H9119.7
N1—C1—H1108.4C8—C9—C10120.51 (19)
N1—C1—C5111.83 (14)C10—C9—H9119.7
N1—C1—S1111.70 (12)C5—C10—H10119.5
S1—C1—H1108.4C9—C10—C5121.00 (18)
N1—C2—C3121.17 (18)C9—C10—H10119.5
O1—C2—C3118.6 (2)C12—C11—C16120.49 (19)
O1—C2—N1120.1 (2)C12—C11—N1119.87 (16)
C2—C3—H3A107.7C16—C11—N1119.61 (18)
C2—C3—H3B107.7C11—C12—H12120.0
H3A—C3—H3B107.1C11—C12—C13120.0 (2)
C4—C3—C2118.4 (2)C13—C12—H12120.0
C4—C3—H3A107.7C12—C13—H13120.4
C4—C3—H3B107.7C14—C13—C12119.2 (2)
C3—C4—H4A109.6C14—C13—H13120.4
C3—C4—H4B109.6C13—C14—H14119.7
C3—C4—S1110.09 (15)C15—C14—C13120.6 (2)
H4A—C4—H4B108.2C15—C14—H14119.7
S1—C4—H4A109.6C14—C15—H15119.7
S1—C4—H4B109.6C14—C15—C16120.6 (2)
C6—C5—C1118.31 (16)C16—C15—H15119.7
C6—C5—C10118.75 (17)C11—C16—C15119.0 (2)
C10—C5—C1122.93 (16)C11—C16—H16120.5
C5—C6—H6120.5C15—C16—H16120.5
C7—C6—C5118.90 (17)C2—N1—C1123.49 (16)
C7—C6—H6120.5C2—N1—C11117.31 (15)
C6—C7—N2118.02 (19)C11—N1—C1116.14 (14)
C8—C7—C6123.01 (18)O2—N2—C7118.5 (2)
C8—C7—N2119.0 (2)O3—N2—C7118.6 (2)
C7—C8—H8121.1O3—N2—O2122.8 (2)
C7—C8—C9117.81 (19)C1—S1—C493.89 (9)
C1—C5—C6—C7178.90 (16)C12—C11—N1—C1−61.8 (2)
C1—C5—C10—C9−178.72 (19)C12—C11—N1—C299.1 (2)
C2—C3—C4—S1−48.3 (3)C12—C13—C14—C15−0.6 (4)
C3—C2—N1—C1−14.7 (3)C13—C14—C15—C160.6 (4)
C3—C2—N1—C11−174.1 (2)C14—C15—C16—C11−0.2 (4)
C3—C4—S1—C163.17 (18)C16—C11—C12—C130.3 (3)
C5—C1—N1—C2162.42 (18)C16—C11—N1—C1116.17 (18)
C5—C1—N1—C11−37.9 (2)C16—C11—N1—C2−82.9 (2)
C5—C1—S1—C4177.36 (13)N1—C1—C5—C6118.45 (17)
C5—C6—C7—C80.1 (3)N1—C1—C5—C10−62.3 (2)
C5—C6—C7—N2179.58 (16)N1—C1—S1—C4−59.28 (14)
C6—C5—C10—C90.5 (3)N1—C2—C3—C418.6 (4)
C6—C7—C8—C90.1 (3)N1—C11—C12—C13178.24 (18)
C6—C7—N2—O2−178.4 (2)N1—C11—C16—C15−178.26 (19)
C6—C7—N2—O31.7 (3)N2—C7—C8—C9−179.38 (18)
C7—C8—C9—C100.0 (3)O1—C2—C3—C4−165.2 (2)
C8—C7—N2—O21.1 (3)O1—C2—N1—C1169.2 (2)
C8—C7—N2—O3−178.8 (2)O1—C2—N1—C119.8 (3)
C8—C9—C10—C5−0.4 (3)S1—C1—C5—C6−118.27 (14)
C10—C5—C6—C7−0.4 (3)S1—C1—C5—C1061.0 (2)
C11—C12—C13—C140.2 (3)S1—C1—N1—C241.3 (2)
C12—C11—C16—C15−0.3 (3)S1—C1—N1—C11−159.05 (12)
D—H···AD—HH···AD···AD—H···A
C1—H1···O1i0.982.193.158 (2)170
C15—H15···O3ii0.932.583.501 (3)174
  5 in total

Review 1.  Spontaneous resolution, whence and whither: from enantiomorphic solids to chiral liquid crystals, monolayers and macro- and supra-molecular polymers and assemblies.

Authors:  Lluïsa Pérez-García; David B Amabilino
Journal:  Chem Soc Rev       Date:  2007-02-05       Impact factor: 54.564

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and antifungal activities of 2-(N-arylsulfonylindol-3-yl)-3-aryl-1,3-thiazinan-4-ones.

Authors:  Huan Qu; Rui Zhang; Ying Hu; Yazhen Ke; Zhinan Gao; Hui Xu
Journal:  Z Naturforsch C J Biosci       Date:  2013 Mar-Apr

4.  2-(3-Nitro-phen-yl)-3-phenyl-2,3-di-hydro-4H-1,3-benzo-thia-zin-4-one.

Authors:  Hemant P Yennawar; Lee J Silverberg; Michael J Minehan; John Tierney
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-23

5.  The anatomy of a comprehensive constrained, restrained refinement program for the modern computing environment - Olex2 dissected.

Authors:  Luc J Bourhis; Oleg V Dolomanov; Richard J Gildea; Judith A K Howard; Horst Puschmann
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.