| Literature DB >> 29765743 |
Mamour Sarr1, Mayoro Diop1, Elhadj Ibrahima Thiam1, Aliou Hamady Barry2, Mohamed Gaye1, Pascal Retailleau3.
Abstract
The search for novel manganese(II) compounds having inter-esting magnetic properties, using 1-(pyridin-2-yl)-2-(pyridin-2-yl-methyl-idene)hydrazine (HL) as a tridendate ligand, led to the preparation of the title mononuclear material, [MnCl(NO3)(C11H10N4)(H2O)], and the determination of its structure by XRD. The asymmetric unit comprises a discrete mol-ecule in which the cation MnII is hepta-coordinated. The environment around the cation is an almost perfect penta-gonal bipyramid. The base is defined by the two N atoms of the pyridine rings, the N atom of the imino function of the ligand and the two O atoms of the chelating bidentate nitrate ligand. The apical positions are occupied by a Cl atom and a water mol-ecule. In the crystal, there are numerous hydrogen bonds of the types Ow-H⋯ONO2 and C-H⋯ONO2, which generate layers parallel to the bc plane in which the ligands in the axial positions point into the inter-layer space. These axial ligands give rise to hydrogen bonds of the types Ow-H⋯ONO2, Ow-H⋯Cl, N-H⋯Cl and C-H⋯Cl, leading to a three-dimensional framework. The chain bridging the two pyridine rings is disordered over two sets of sites in a 0.53 (2):0.47 (2) ratio.Entities:
Keywords: Schiff base; crystal structure; manganese
Year: 2018 PMID: 29765743 PMCID: PMC5946965 DOI: 10.1107/S2056989018003493
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1An ORTEP view of the title compound, showing the atom-numbering scheme and intramolecular hydrogen bonds as dashed lines. Displacement ellipsoids are plotted at the 50% probability level.
Selected bond lengths (Å)
| Mn1—O1 | 2.2239 (14) | N2—N3 | 1.288 (11) |
| Mn1—N2 | 2.2750 (16) | N2—C6 | 1.325 (13) |
| Mn1—N4 | 2.3292 (16) | N2—C6 | 1.465 (10) |
| Mn1—N1 | 2.3300 (16) | N3—C7 | 1.566 (9) |
| Mn1—O2 | 2.3372 (14) | C5—C6 | 1.398 (15) |
| Mn1—O3 | 2.3635 (15) | C5—N3 | 1.450 (11) |
| Mn1—Cl1 | 2.4999 (6) | C7—C6 | 1.180 (11) |
| N2—N3 | 1.217 (7) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.91 | 2.23 | 3.1225 (15) | 170 |
| O1 | 0.87 | 1.92 | 2.7969 (19) | 177 |
| O1 | 0.87 | 2.68 | 3.506 (2) | 157 |
| N3—H3 | 0.86 | 2.71 | 3.501 (7) | 153 |
| C1—H1⋯O2 | 0.93 | 2.53 | 3.140 (3) | 124 |
| C6—H6⋯Cl1iii | 0.93 | 2.66 | 3.489 (11) | 149 |
| C8—H8⋯O4iv | 0.93 | 2.54 | 3.290 (3) | 138 |
| C10—H10⋯Cl1v | 0.93 | 2.83 | 3.669 (3) | 152 |
| C11—H11⋯O3 | 0.93 | 2.44 | 3.062 (3) | 125 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
Figure 2Representation of the title compound, showing the intermolecular hydrogen bonds as dashed lines.
Experimental details
| Crystal data | |
| Chemical formula | [MnCl(NO3)(C11H10N4)(H2O)] |
|
| 368.65 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 293 |
|
| 6.9698 (1), 10.6055 (2), 10.8476 (2) |
| α, β, γ (°) | 98.784 (2), 97.636 (2), 108.308 (2) |
|
| 738.21 (2) |
|
| 2 |
| Radiation type | Mo |
| μ (mm−1) | 1.10 |
| Crystal size (mm) | 0.09 × 0.08 × 0.06 |
| Data collection | |
| Diffractometer | Bruker KappaCCD |
| Absorption correction | – |
| No. of measured, independent and observed [ | 22026, 3571, 2905 |
|
| 0.038 |
| Refinement | |
|
| 0.034, 0.091, 1.06 |
| No. of reflections | 3571 |
| No. of parameters | 209 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.31, −0.46 |
Computer programs: APEX3 and SAINT (Bruker, 2016 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸) and ORTEP-3 for Windows (Farrugia, 2012 ▸).
| [MnCl(NO3)(C11H10N4)(H2O)] | |
| Triclinic, | |
| Mo | |
| Cell parameters from 9920 reflections | |
| θ = 2.4–28.6° | |
| α = 98.784 (2)° | µ = 1.10 mm−1 |
| β = 97.636 (2)° | |
| γ = 108.308 (2)° | Prismatic, yellow |
| 0.09 × 0.08 × 0.06 mm |
| Bruker KappaCCD diffractometer | 2905 reflections with |
| Radiation source: fine-focus sealed tube | |
| Detector resolution: 9 pixels mm-1 | θmax = 29.1°, θmin = 3.6° |
| CCD scans | |
| 22026 measured reflections | |
| 3571 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H-atom parameters constrained | |
| 3571 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.46 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Occ. (<1) | |||||
| Mn1 | 0.71914 (4) | 0.39182 (3) | 0.74637 (2) | 0.04153 (11) | |
| Cl1 | 0.33417 (8) | 0.30415 (5) | 0.69679 (5) | 0.05511 (14) | |
| O1W | 1.0615 (2) | 0.46771 (14) | 0.79278 (13) | 0.0541 (3) | |
| H1WA | 1.140892 | 0.416765 | 0.774402 | 0.081* | |
| H1WB | 1.118139 | 0.516748 | 0.869134 | 0.081* | |
| O2 | 0.7483 (2) | 0.38248 (13) | 0.96166 (13) | 0.0529 (3) | |
| O3 | 0.7175 (3) | 0.19991 (15) | 0.83256 (13) | 0.0631 (4) | |
| O4 | 0.7546 (3) | 0.20477 (18) | 1.03568 (15) | 0.0728 (5) | |
| N1 | 0.7321 (3) | 0.61349 (16) | 0.81806 (18) | 0.0528 (4) | |
| N2 | 0.7448 (2) | 0.50621 (19) | 0.58471 (17) | 0.0519 (4) | |
| N3 | 0.7437 (8) | 0.4569 (8) | 0.4755 (5) | 0.0484 (13) | 0.53 (2) |
| H3N | 0.742706 | 0.499635 | 0.414304 | 0.058* | 0.53 (2) |
| N4 | 0.7511 (3) | 0.25742 (19) | 0.56463 (15) | 0.0550 (4) | |
| N5 | 0.7400 (3) | 0.25956 (16) | 0.94508 (15) | 0.0474 (4) | |
| C1 | 0.7239 (4) | 0.6682 (2) | 0.9358 (2) | 0.0651 (6) | |
| H1 | 0.706417 | 0.613021 | 0.995278 | 0.078* | |
| C2 | 0.7400 (4) | 0.8019 (2) | 0.9744 (3) | 0.0810 (8) | |
| H2 | 0.735126 | 0.835887 | 1.057767 | 0.097* | |
| C3 | 0.7630 (5) | 0.8828 (3) | 0.8875 (4) | 0.0962 (11) | |
| H3 | 0.773464 | 0.973219 | 0.910758 | 0.115* | |
| C4 | 0.7707 (4) | 0.8300 (3) | 0.7648 (4) | 0.0840 (9) | |
| H4 | 0.787019 | 0.884113 | 0.704332 | 0.101* | |
| C5 | 0.7536 (3) | 0.6938 (2) | 0.7329 (3) | 0.0593 (6) | |
| C6 | 0.757 (2) | 0.6350 (13) | 0.6090 (13) | 0.072 (6) | 0.53 (2) |
| H6 | 0.766705 | 0.684993 | 0.545312 | 0.087* | 0.53 (2) |
| C7 | 0.7444 (3) | 0.3077 (3) | 0.45798 (19) | 0.0605 (6) | |
| C8 | 0.7378 (4) | 0.2313 (4) | 0.3399 (2) | 0.0898 (10) | |
| H8 | 0.732275 | 0.267981 | 0.267437 | 0.108* | |
| C9 | 0.7394 (5) | 0.1032 (4) | 0.3320 (3) | 0.1050 (13) | |
| H9 | 0.732556 | 0.050255 | 0.253735 | 0.126* | |
| C10 | 0.7511 (5) | 0.0521 (3) | 0.4395 (3) | 0.0934 (10) | |
| H10 | 0.754750 | −0.035280 | 0.435722 | 0.112* | |
| C11 | 0.7575 (4) | 0.1323 (3) | 0.5545 (2) | 0.0744 (7) | |
| H11 | 0.766778 | 0.097228 | 0.627718 | 0.089* | |
| C6A | 0.7462 (14) | 0.4203 (12) | 0.4658 (9) | 0.051 (2)* | 0.47 (2) |
| H6A | 0.748686 | 0.456233 | 0.392738 | 0.061* | 0.47 (2) |
| N3A | 0.755 (2) | 0.6312 (11) | 0.6045 (10) | 0.057 (4)* | 0.47 (2) |
| H3NA | 0.761514 | 0.675558 | 0.544192 | 0.069* | 0.47 (2) |
| Mn1 | 0.05255 (18) | 0.03866 (16) | 0.03561 (16) | 0.02057 (12) | 0.00415 (12) | 0.00731 (11) |
| Cl1 | 0.0516 (3) | 0.0560 (3) | 0.0593 (3) | 0.0232 (2) | 0.0087 (2) | 0.0079 (2) |
| O1W | 0.0570 (8) | 0.0574 (8) | 0.0463 (7) | 0.0285 (7) | −0.0016 (6) | −0.0033 (6) |
| O2 | 0.0720 (9) | 0.0401 (7) | 0.0464 (7) | 0.0235 (6) | 0.0058 (7) | 0.0038 (6) |
| O3 | 0.0995 (12) | 0.0490 (8) | 0.0421 (8) | 0.0330 (8) | 0.0078 (8) | 0.0023 (6) |
| O4 | 0.1101 (13) | 0.0758 (10) | 0.0518 (9) | 0.0480 (10) | 0.0203 (9) | 0.0308 (8) |
| N1 | 0.0537 (9) | 0.0395 (8) | 0.0670 (11) | 0.0204 (7) | 0.0041 (8) | 0.0132 (8) |
| N2 | 0.0423 (8) | 0.0652 (11) | 0.0491 (10) | 0.0171 (8) | 0.0027 (7) | 0.0224 (8) |
| N3 | 0.069 (3) | 0.046 (3) | 0.034 (2) | 0.026 (2) | 0.0046 (15) | 0.014 (2) |
| N4 | 0.0540 (9) | 0.0652 (11) | 0.0392 (9) | 0.0180 (8) | 0.0063 (7) | −0.0017 (7) |
| N5 | 0.0609 (10) | 0.0437 (8) | 0.0407 (8) | 0.0230 (7) | 0.0073 (7) | 0.0091 (7) |
| C1 | 0.0751 (15) | 0.0483 (11) | 0.0736 (15) | 0.0301 (11) | 0.0082 (12) | 0.0037 (10) |
| C2 | 0.0791 (16) | 0.0505 (13) | 0.111 (2) | 0.0316 (12) | 0.0110 (15) | −0.0054 (14) |
| C3 | 0.0790 (18) | 0.0406 (12) | 0.170 (3) | 0.0292 (12) | 0.019 (2) | 0.0101 (17) |
| C4 | 0.0739 (16) | 0.0532 (13) | 0.139 (3) | 0.0303 (12) | 0.0211 (17) | 0.0425 (17) |
| C5 | 0.0462 (11) | 0.0481 (11) | 0.0895 (18) | 0.0194 (9) | 0.0080 (11) | 0.0286 (11) |
| C6 | 0.067 (5) | 0.071 (6) | 0.095 (9) | 0.028 (3) | 0.003 (3) | 0.067 (7) |
| C7 | 0.0391 (10) | 0.0915 (18) | 0.0366 (10) | 0.0094 (10) | 0.0041 (8) | 0.0010 (10) |
| C8 | 0.0651 (15) | 0.134 (3) | 0.0410 (13) | 0.0061 (17) | 0.0118 (11) | −0.0108 (15) |
| C9 | 0.0724 (18) | 0.132 (3) | 0.0646 (19) | −0.0014 (18) | 0.0206 (14) | −0.0446 (19) |
| C10 | 0.091 (2) | 0.0782 (18) | 0.091 (2) | 0.0175 (15) | 0.0285 (17) | −0.0271 (16) |
| C11 | 0.0906 (18) | 0.0643 (14) | 0.0637 (15) | 0.0286 (13) | 0.0194 (13) | −0.0085 (11) |
| Mn1—O1W | 2.2239 (14) | C1—C2 | 1.380 (3) |
| Mn1—N2 | 2.2750 (16) | C1—H1 | 0.9300 |
| Mn1—N4 | 2.3292 (16) | C2—C3 | 1.361 (5) |
| Mn1—N1 | 2.3300 (16) | C2—H2 | 0.9300 |
| Mn1—O2 | 2.3372 (14) | C3—C4 | 1.378 (5) |
| Mn1—O3 | 2.3635 (15) | C3—H3 | 0.9300 |
| Mn1—Cl1 | 2.4999 (6) | C4—C5 | 1.396 (3) |
| O1W—H1WA | 0.9067 | C4—H4 | 0.9300 |
| O1W—H1WB | 0.8745 | C5—C6 | 1.398 (15) |
| O2—N5 | 1.270 (2) | C5—N3A | 1.450 (11) |
| O3—N5 | 1.251 (2) | C6—H6 | 0.9300 |
| O4—N5 | 1.224 (2) | C7—C6A | 1.180 (11) |
| N1—C1 | 1.337 (3) | C7—C8 | 1.394 (3) |
| N1—C5 | 1.341 (3) | C8—C9 | 1.352 (5) |
| N2—N3 | 1.217 (7) | C8—H8 | 0.9300 |
| N2—N3A | 1.288 (11) | C9—C10 | 1.362 (5) |
| N2—C6 | 1.325 (13) | C9—H9 | 0.9300 |
| N2—C6A | 1.465 (10) | C10—C11 | 1.386 (3) |
| N3—C7 | 1.566 (9) | C10—H10 | 0.9300 |
| N3—H3N | 0.8600 | C11—H11 | 0.9300 |
| N4—C11 | 1.330 (3) | C6A—H6A | 0.9300 |
| N4—C7 | 1.347 (3) | N3A—H3NA | 0.8600 |
| O1W—Mn1—N2 | 87.38 (6) | N1—C1—C2 | 123.8 (3) |
| O1W—Mn1—N4 | 85.96 (6) | N1—C1—H1 | 118.1 |
| N2—Mn1—N4 | 69.62 (7) | C2—C1—H1 | 118.1 |
| O1W—Mn1—N1 | 87.94 (5) | C3—C2—C1 | 118.4 (3) |
| N2—Mn1—N1 | 69.85 (7) | C3—C2—H2 | 120.8 |
| N4—Mn1—N1 | 139.23 (7) | C1—C2—H2 | 120.8 |
| O1W—Mn1—O2 | 83.70 (5) | C2—C3—C4 | 119.6 (2) |
| N2—Mn1—O2 | 152.55 (6) | C2—C3—H3 | 120.2 |
| N4—Mn1—O2 | 135.11 (6) | C4—C3—H3 | 120.2 |
| N1—Mn1—O2 | 83.90 (6) | C3—C4—C5 | 118.7 (3) |
| O1W—Mn1—O3 | 89.13 (6) | C3—C4—H4 | 120.6 |
| N2—Mn1—O3 | 151.72 (6) | C5—C4—H4 | 120.6 |
| N4—Mn1—O3 | 82.14 (6) | N1—C5—C4 | 122.1 (3) |
| N1—Mn1—O3 | 138.06 (6) | N1—C5—C6 | 117.1 (4) |
| O2—Mn1—O3 | 54.21 (5) | C4—C5—C6 | 120.8 (5) |
| O1W—Mn1—Cl1 | 179.07 (4) | N1—C5—N3A | 116.5 (5) |
| N2—Mn1—Cl1 | 93.54 (4) | C4—C5—N3A | 121.4 (5) |
| N4—Mn1—Cl1 | 94.25 (5) | N2—C6—C5 | 118.3 (7) |
| N1—Mn1—Cl1 | 92.48 (4) | N2—C6—H6 | 120.9 |
| O2—Mn1—Cl1 | 95.52 (4) | C5—C6—H6 | 120.9 |
| O3—Mn1—Cl1 | 90.00 (5) | C6A—C7—N4 | 118.6 (5) |
| Mn1—O1W—H1WA | 124.5 | C6A—C7—C8 | 119.5 (5) |
| Mn1—O1W—H1WB | 116.1 | N4—C7—C8 | 122.0 (3) |
| H1WA—O1W—H1WB | 105.9 | N4—C7—N3 | 115.6 (2) |
| N5—O2—Mn1 | 95.09 (10) | C8—C7—N3 | 122.4 (3) |
| N5—O3—Mn1 | 94.39 (10) | C9—C8—C7 | 119.1 (3) |
| C1—N1—C5 | 117.34 (19) | C9—C8—H8 | 120.4 |
| C1—N1—Mn1 | 126.26 (14) | C7—C8—H8 | 120.4 |
| C5—N1—Mn1 | 116.38 (16) | C8—C9—C10 | 119.5 (3) |
| N3—N2—C6 | 116.9 (6) | C8—C9—H9 | 120.2 |
| N3A—N2—C6A | 128.2 (6) | C10—C9—H9 | 120.2 |
| N3—N2—Mn1 | 124.8 (4) | C9—C10—C11 | 119.0 (3) |
| N3A—N2—Mn1 | 120.1 (5) | C9—C10—H10 | 120.5 |
| C6—N2—Mn1 | 118.4 (6) | C11—C10—H10 | 120.5 |
| C6A—N2—Mn1 | 111.7 (5) | N4—C11—C10 | 122.7 (3) |
| N2—N3—C7 | 113.2 (4) | N4—C11—H11 | 118.6 |
| N2—N3—H3N | 123.4 | C10—C11—H11 | 118.6 |
| C7—N3—H3N | 123.4 | C7—C6A—N2 | 123.3 (8) |
| C11—N4—C7 | 117.6 (2) | C7—C6A—H6A | 118.4 |
| C11—N4—Mn1 | 126.03 (15) | N2—C6A—H6A | 118.4 |
| C7—N4—Mn1 | 116.15 (16) | N2—N3A—C5 | 117.1 (8) |
| O4—N5—O3 | 122.94 (16) | N2—N3A—H3NA | 121.5 |
| O4—N5—O2 | 120.77 (16) | C5—N3A—H3NA | 121.5 |
| O3—N5—O2 | 116.29 (15) |
| H··· | ||||
| O1 | 0.91 | 2.23 | 3.1225 (15) | 170 |
| O1 | 0.87 | 1.92 | 2.7969 (19) | 177 |
| O1 | 0.87 | 2.68 | 3.506 (2) | 157 |
| N3—H3 | 0.86 | 2.71 | 3.501 (7) | 153 |
| C1—H1···O2 | 0.93 | 2.53 | 3.140 (3) | 124 |
| C6—H6···Cl1iii | 0.93 | 2.66 | 3.489 (11) | 149 |
| C8—H8···O4iv | 0.93 | 2.54 | 3.290 (3) | 138 |
| C10—H10···Cl1v | 0.93 | 2.83 | 3.669 (3) | 152 |
| C11—H11···O3 | 0.93 | 2.44 | 3.062 (3) | 125 |