Literature DB >> 29763302

Assessment of Density Functional Methods for Geometry Optimization of Bimolecular van der Waals Complexes.

Dominic A Sirianni1, Asem Alenaizan1, Daniel L Cheney2, C David Sherrill3.   

Abstract

We explore the suitability of three popular density functionals (B97-D3, B3LYP-D3, M05-2X) for producing accurate equilibrium geometries of van der Waals (vdW) complexes with diverse binding motifs. For these functionals, optimizations using Dunning's aug-cc-pVDZ basis set best combine accuracy and a reasonable computational expense. Each DFT/aug-cc-pVDZ combination produces optimized equilibrium geometries for 21 small vdW complexes of organic molecules (up to four non-hydrogen atoms total) that agree with high-level CCSD(T)/CBS reference geometries to within ±0.1 Å for the averages of the center-of-mass displacement and the mean least root-mean-squared displacement. The DFT/aug-cc-pVDZ combinations are also able to reproduce the optimal center-of-mass displacements interpolated from CCSD(T)/CBS radial potential energy surfaces in both NBC7x and HBC6 test sets to within ±0.1 Å. We therefore conclude that each of these denisty functional methods, together with the aug-cc-pVDZ basis set, is suitable for producing equilibrium geometries of generic nonbonded complexes.

Entities:  

Year:  2018        PMID: 29763302     DOI: 10.1021/acs.jctc.8b00114

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  Psi4 1.4: Open-source software for high-throughput quantum chemistry.

Authors:  Daniel G A Smith; Lori A Burns; Andrew C Simmonett; Robert M Parrish; Matthew C Schieber; Raimondas Galvelis; Peter Kraus; Holger Kruse; Roberto Di Remigio; Asem Alenaizan; Andrew M James; Susi Lehtola; Jonathon P Misiewicz; Maximilian Scheurer; Robert A Shaw; Jeffrey B Schriber; Yi Xie; Zachary L Glick; Dominic A Sirianni; Joseph Senan O'Brien; Jonathan M Waldrop; Ashutosh Kumar; Edward G Hohenstein; Benjamin P Pritchard; Bernard R Brooks; Henry F Schaefer; Alexander Yu Sokolov; Konrad Patkowski; A Eugene DePrince; Uğur Bozkaya; Rollin A King; Francesco A Evangelista; Justin M Turney; T Daniel Crawford; C David Sherrill
Journal:  J Chem Phys       Date:  2020-05-14       Impact factor: 3.488

2.  Effect of Poly(vinyl alcohol) on Nanoencapsulation of Budesonide in Chitosan Nanoparticles via Ionic Gelation and Its Improved Bioavailability.

Authors:  Georgia Michailidou; Nina Maria Ainali; Eleftheria Xanthopoulou; Stavroula Nanaki; Margaritis Kostoglou; Emmanuel N Koukaras; Dimitrios N Bikiaris
Journal:  Polymers (Basel)       Date:  2020-05-12       Impact factor: 4.329

3.  Competition between cyclization and unusual Norrish type I and type II nitro-acyl migration pathways in the photouncaging of 1-acyl-7-nitroindoline revealed by computations.

Authors:  Pierpaolo Morgante; Charitha Guruge; Yannick P Ouedraogo; Nasri Nesnas; Roberto Peverati
Journal:  Sci Rep       Date:  2021-01-14       Impact factor: 4.379

4.  In Situ Assessment of Intrinsic Strength of X-I⋯OA-Type Halogen Bonds in Molecular Crystals with Periodic Local Vibrational Mode Theory.

Authors:  Yunwen Tao; Yue Qiu; Wenli Zou; Sadisha Nanayakkara; Seth Yannacone; Elfi Kraka
Journal:  Molecules       Date:  2020-03-30       Impact factor: 4.411

  4 in total

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