Literature DB >> 29761459

Mouse Genome Informatics (MGI) Is the International Resource for Information on the Laboratory Mouse.

MeiYee Law1, David R Shaw2.   

Abstract

Mouse Genome Informatics (MGI, http://www.informatics.jax.org/ ) web resources provide free access to meticulously curated information about the laboratory mouse. MGI's primary goal is to help researchers investigate the genetic foundations of human diseases by translating information from mouse phenotypes and disease models studies to human systems. MGI provides comprehensive phenotypes for over 50,000 mutant alleles in mice and provides experimental model descriptions for over 1500 human diseases. Curated data from scientific publications are integrated with those from high-throughput phenotyping and gene expression centers. Data are standardized using defined, hierarchical vocabularies such as the Mammalian Phenotype (MP) Ontology, Mouse Developmental Anatomy and the Gene Ontologies (GO). This chapter introduces you to Gene and Allele Detail pages and provides step-by-step instructions for simple searches and those that take advantage of the breadth of MGI data integration.

Entities:  

Keywords:  Alleles; Disease models; Functional annotations; GXD; Gene expression; Genotypes; IMSR; MGD; MGI; MTB; Mouse; MouseMine; Phenotypes; Strains

Mesh:

Year:  2018        PMID: 29761459     DOI: 10.1007/978-1-4939-7737-6_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  15 in total

1.  TcoFBase: a comprehensive database for decoding the regulatory transcription co-factors in human and mouse.

Authors:  Yuexin Zhang; Chao Song; Yimeng Zhang; Yuezhu Wang; Chenchen Feng; Jiaxin Chen; Ling Wei; Qi Pan; Desi Shang; Yanbing Zhu; Jiang Zhu; Shuangsang Fang; Jun Zhao; Yongsan Yang; Xilong Zhao; Xiaozheng Xu; Qiuyu Wang; Jincheng Guo; Chunquan Li
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

2.  Adipocyte-Specific Ablation of PU.1 Promotes Energy Expenditure and Ameliorates Metabolic Syndrome in Aging Mice.

Authors:  Ke Yun Chen; Alejandra De Angulo; Xin Guo; Aditya More; Scott A Ochsner; Eduardo Lopez; David Saul; Weijun Pang; Yuxiang Sun; Neil J McKenna; Qiang Tong
Journal:  Front Aging       Date:  2022-02-02

3.  Multi-Omic Approaches to Identify Genetic Factors in Metabolic Syndrome.

Authors:  Karen C Clark; Anne E Kwitek
Journal:  Compr Physiol       Date:  2021-12-29       Impact factor: 8.915

4.  Target Genes of Autism Risk Loci in Brain Frontal Cortex.

Authors:  Yan Sun; Xueming Yao; Michael E March; Xinyi Meng; Junyi Li; Zhi Wei; Patrick M A Sleiman; Hakon Hakonarson; Qianghua Xia; Jin Li
Journal:  Front Genet       Date:  2019-08-09       Impact factor: 4.599

5.  Genotype-Phenotype Association Analysis Reveals New Pathogenic Factors for Osteogenesis Imperfecta Disease.

Authors:  Jingru Shi; Meng Ren; Jinmeng Jia; Muxue Tang; Yongli Guo; Xin Ni; Tieliu Shi
Journal:  Front Pharmacol       Date:  2019-10-15       Impact factor: 5.810

Review 6.  Establishment and application of information resource of mutant mice in RIKEN BioResource Research Center.

Authors:  Hiroshi Masuya; Daiki Usuda; Hatsumi Nakata; Naomi Yuhara; Keiko Kurihara; Yuri Namiki; Shigeru Iwase; Toyoyuki Takada; Nobuhiko Tanaka; Kenta Suzuki; Yuki Yamagata; Norio Kobayashi; Atsushi Yoshiki; Tatsuya Kushida
Journal:  Lab Anim Res       Date:  2021-01-18

7.  Using MARRVEL v1.2 for Bioinformatics Analysis of Human Genes and Variant Pathogenicity.

Authors:  Julia Wang; Dongxue Mao; Fatima Fazal; Seon-Young Kim; Shinya Yamamoto; Hugo Bellen; Zhandong Liu
Journal:  Curr Protoc Bioinformatics       Date:  2019-09

8.  Cell-Cell Communication at the Embryo Implantation Site of Mouse Uterus Revealed by Single-Cell Analysis.

Authors:  Yi Yang; Jia-Peng He; Ji-Long Liu
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

Review 9.  A most formidable arsenal: genetic technologies for building a better mouse.

Authors:  James F Clark; Colin J Dinsmore; Philippe Soriano
Journal:  Genes Dev       Date:  2020-10-01       Impact factor: 11.361

10.  Single-cell analysis of mouse and human prostate reveals novel fibroblasts with specialized distribution and microenvironment interactions.

Authors:  Diya B Joseph; Gervaise H Henry; Alicia Malewska; Jeffrey C Reese; Ryan J Mauck; Jeffrey C Gahan; Ryan C Hutchinson; Venkat S Malladi; Claus G Roehrborn; Chad M Vezina; Douglas W Strand
Journal:  J Pathol       Date:  2021-07-22       Impact factor: 9.883

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