| Literature DB >> 29755989 |
Jake Fountain1,2, Robert Woodgate1,2, Luzia Rast1,2, Marta Hernández-Jover1,2.
Abstract
Sheep production systems are a major industry in Australia, with a gross value of roughly $4.66 billion; 87.3% of which is attributable to export markets. Exotic diseases such as foot-and-mouth disease (FMD) are a potential threat to the viability of Australia's export market. Previous outbreaks of FMD in developed countries, and challenges in the management of onshore biosecurity, signify the importance of on-farm biosecurity in controlling disease transmission. This study aims to investigate the risk of disease introduction and spread among New South Wales (NSW) sheep properties using FMD as a case study and draw recommendation for the industry. Exposure and partial consequence assessments, using scenario trees and Monte Carlo stochastic modeling, were conducted to identify pathways of introduction and spread and calculate the probabilities of these pathways occurring. Input parameters were estimated from the data obtained during qualitative interviews with producers and scientific literature. According to the reported practices of sheep producers and assuming each pathway was carrying the FMD virus, the exposure assessment estimates the median (5-95%) probability of FMD exposure of sheep on a naive property to be 0.619 (0.541-0.698), 0.151 (0.085-0.239), 0.235 (0.153-0.324), and 0.710 (0.619-0.791) for introduction through new stock, wildlife, carriers (humans, dogs, and vehicles), and neighbors, respectively. The spread assessment estimated the median probability of FMD spreading from an infected sheep property to neighboring enterprises to be 0.603 (0.504-0.698). A similar probability was estimated for spread via wildlife (0.523; 0.404-0.638); and a lower spread probability was estimated for carriers (0.315; 0.171-0.527), sheep movement (0.285; 0.161-0.462), and dead stock (0.168; 0.070-0.312). The sensitivity analysis revealed that the introduction of an FMD-infected sheep was more influential for exposure via new stock than isolation practices. Sharing adjacent boundaries was found to be the most influential factor for exposure and spread between neighboring enterprises, and to a lesser extent, hygiene practices were found to have the most influence on exposure and spread through carriers. To minimize the potential risk of FMD introduction and spread between sheep properties, maintenance of boundary fences, identification of infected animals before introduction to the property, and hygiene and disinfection practices should be improved.Entities:
Keywords: Australia; biosecurity; foot-and-mouth disease; risk assessment; sheep
Year: 2018 PMID: 29755989 PMCID: PMC5932351 DOI: 10.3389/fvets.2018.00080
Source DB: PubMed Journal: Front Vet Sci ISSN: 2297-1769
Figure 1Scenario tree representing the pathways of exposure of sheep to foot-and-mouth disease (FMD) through the introduction of infected sheep. (Prob_Intro, probability that a producer will introduce a FMD-infected sheep; Prob_Isolate, probability that a producer will isolate introduced stock; Prob_sBound, probability of an isolated animal sharing boundaries with flock; Prob_q21, probability that quarantine will last for 21 days; Prob_cSign, probability of sheep developing clinical signs; Prob_Inspect, probability that a producer will individually inspect new sheep; Prob_ID, probability that a producer will identify FMD-specific lesions as unusual; Prob_Report, probability that producer will contact veterinarian or government agency).
Figure 4Scenario tree representing the pathways of exposure of sheep to foot-and-mouth disease through livestock on neighboring enterprises. (Prop_Cattle, proportion of neighbors with cattle; Prop_nPigs, proportion of neighbors with domestic pigs; Prop_Sheep, proportion of neighbors with only sheep; Prob_GwC, probability that sheep graze with cattle; Prob_nBound, probability that a sheep flock shares a boundary with an adjacent livestock enterprise; PI_C2C, probability of aerosol transmission from cattle to cattle; PI_C2S, probability of aerosol transmission from cattle to sheep; PI_P2C, probability of aerosol transmission from pigs to cattle; PI_ P2S, probability of aerosol transmission from pigs to sheep; PI_S2C, probability of aerosol transmission from sheep to cattle; PI_ S2S, probability of aerosol transmission from sheep to sheep).
Nodes, parameter estimates, and input values used for the exposure assessment evaluating the exposure of sheep to foot-and-mouth disease (FMD) through the introduction of infected sheep among commercial sheep properties in New South Wales, Australia.
| Node | Branch of node | Parameter estimates | Input value | Data sources |
|---|---|---|---|---|
| 1. Introduces sheep | Yes No | Probability that a producer will introduce an animal in a given year (Prob_Intro) | 1- [Pert (0.25, 0.37, 0.5)] Minimum: 882 total sheep producers, 217 producers did not introduce sheep in past 2 years Maximum: 70% of smallholders did not introduce sheep; commercial producers estimated to purchase sheep more often (50%) Most likely: midpoint between maximum and minimum (0.37) | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 2. Isolates new stock | Yes No | Probability that a producer will isolate stock when it is brought onto the property (Prob_Isolate) | Beta ( 881 sheep producers ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 3. Shares boundary with main flock | Yes No | Probability of an isolated animal being held in an enclosure adjacent to a susceptible animal (Prob_sBound) | Beta ( 8 sheep producers that quarantine ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) |
| 4. Quarantine period of 21 days | Yes No | Probability that a producer will quarantine introduced animals for a long enough period to allow for detection of FMD clinical signs (Prob_q21) | Pert (0.17, 0.52, 0.88) Minimum: 76 small holders isolated sheep; 13 isolated for ≥21 days. Maximum: 8 sheep producers isolate; 7 isolate for ≥21 days Most likely: midpoint between minimum and maximum. | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 5. Clinical signs of FMD apparent in sheep | Yes No | Probability of FMD clinical signs developing in infected sheep (Prob_cSign) | Prob_cSign = Moderate (uniform (0.3, 0.7)) | ( |
| 6. Inspects new stock individually | Yes No | Probability that a sheep producer will individually inspect introduced animals placed in quarantine (Prob_Inspect) | Uniform (0.42, 0.90) Minimum: 12 sheep producers in total, 5 producers inspect new stock individually Maximum: 870 sheep producers in total, 780 producers inspect new stock | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 7. Identifies clinical signs as unusual | Yes No | Probability that a sheep producer will identify FMD-specific clinical signs as unusual (Prob_ID) | Prob_ID = Moderate (uniform (0.3, 07)) | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 8. Reports to private veterinarian of government agency | Yes No | Probability that a sheep producer will contact a private veterinarian or government official once unusual signs have been identified (Prob_Report) | Pert (0.5, 0.7, 0.85) Minimum: 12 sheep producers in total, 6 producers contact government for unusual clinical signs. Most likely: 882 sheep producers in total, 619 contact veterinarians for unusual clinical signs Maximum: Average number of producers contacting veterinarians for unusual clinical signs including sheep producers (0.7), beef producers (0.98), and producers from qualitative interviews (0.75) | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
Nodes, parameter estimates, and input values used for the exposure assessment evaluating the exposure of sheep to foot-and-mouth disease (FMD) through livestock on neighboring enterprises among commercial sheep properties in New South Wales, Australia.
| Node | Branch of node | Parameter estimates | Input value | Data sources |
|---|---|---|---|---|
| 1. Neighboring enterprises | Pig Cattle Sheep | Proportion of livestock enterprises surrounding sheep properties including pigs (Prop_nPig), cattle (Prop_Cattle), and sheep (Prop_Sheep) enterprises | Beta ( 49 neighboring enterprises in total ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) |
| 2. Sheep flock graze with cattle | Yes No | Probability that sheep flocks are held on the same pastures as cattle (Prob_GwC) | Beta ( 187 producers in total ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 3. Shared boundary with neighboring stock | Yes No | Probability that a sheep flock will share a boundary with an adjacent livestock enterprise (Prob_nBound) | Beta ( 50 boundaries ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) |
| 4. Exposure via aerosol | Yes No | Probability that livestock will be exposed to and infected with FMD | PI_C2C = Low (uniform (0.05, 0.3)) PI_P2C = High (uniform (0.7, 1)) PI_P2S = Moderate (uniform (0.3, 0.7)) PI_S2C = Low (uniform (0.05, 0.3)) PI_S2S = Very low (uniform (0.001, 0.05)) PI_C2S = Very low (uniform (0.001, 0.05)) | ( |
Figure 5Scenario tree representing the overall spread of foot-and-mouth disease (FMD) from an infected sheep property to other susceptible livestock enterprises. (Prob_GwC_S, probability that sheep graze with cattle; Prob_IDcattle_S, probability that FMD will be detected in cattle; Prob_cSigns_S, probability of sheep developing clinical signs; Prob_EarlyID_S, probability that FMD will be detected in sheep early enough to limit disease spread; Prob_ID_S, probability that a producer will identify FMD-specific lesions as unusual; Prob_Report_S, probability that producer will contact veterinarian or government agency).
Nodes, parameters estimates and input values used for the consequence assessment evaluating the probability of FMD spread from an infected sheep property to other susceptible livestock enterprises.
| Node | Branch of node | Parameter estimates | Input value | Data sources | |
|---|---|---|---|---|---|
| 1. Sheep flock graze with cattle | Yes No | Probability that sheep flocks are held on the same pastures as cattle (Prob_GwC_S) | Beta ( 187 producers in total ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 2. FMD detected in cattle | Yes No | Probability that FMD will be detected in grazing cattle infected with the virus before spread occurs (Prob_IDcattle_S) | Uniform (minimum, maximum) Minimum: Overall probability of daily inspection (DI)/y = Σ (Proportion of producers inspecting sheep daily × Proportion of weeks/y of DI) Beta ( 1/12 producer × 18/52 weeks DI 6/12 producers × 6/52 weeks DI 5/12 producers × 0/52 weeks DI Maximum: Beta ( 181 beef producers ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 3. Clinical signs of FMD apparent in sheep | Yes No | Probability of FMD clinical signs developing in infected sheep (Prob_cSign_S) | Prob_cSign_S = Moderate (Uniform (0.3, 0.7)) | ( | |
| 4. Early detection of clinical signs | Yes No | Probability that FMD will be detected in sheep early enough to prevent spread of FMD (Prob_EarlyID_S) | Overall probability of DI/y = Σ (Proportion of producers inspecting sheep daily × Proportion of weeks/y of DI) Beta ( 1/12 producer × 18/52 weeks DI 6/12 producers × 6/52 weeks DI 5/12 producers × 0/52 weeks DI | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 5. Identifies clinical signs as unusual | Yes No | Probability that a sheep producer will identify FMD-specific clinical signs as unusual (Prob_ID_S) | Prob_ID_S = Moderate (uniform (0.3,07)) | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 6. Reports to private veterinarian or government agency | Yes No | Probability that a sheep producer will contact a private veterinarian or government official once unusual signs have been identified (Prob_Report_S) | Pert (0.5, 0.7, 0.85) Minimum: 12 sheep producers in total, 6 contact government for unusual clinical signs Most likely: 882 sheep producers in total, 619 contact veterinarians for unusual clinical signs Maximum: Average number of producers contacting veterinarians for unusual clinical signs including sheep (0.7), beef (0.98), and qualitative interview producers (0.75) | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 7. Spread of FMD | Yes No | Probability of spread through sheep movements (Prob_Mov_S), or visitors (Prob_Visitor_S) | Prob_Mov_S = Σ (Proportion of producers moving sheep/frequency × Qualitative estimate of risk of spread) Beta ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 1 (1) | Extremely low (Uniform (0.00001, 0.001)) | ||||
| 2–4 (3) | Very low (Uniform (0.001, 0.05)) | ||||
| 5–10 (4) | Low (Uniform (0.05, 0.3)) | ||||
| 11–20 (4) | Moderate (Uniform (0.3, 0.7)) | ||||
| >20 (1) | High (Uniform (0.7, 1)) | ||||
Beta ( Uniform (min, max): Qualitative estimate of risk of spread | |||||
| 2–4 (2) | Very low (Uniform (0.001, 0.05)) | ||||
| 5–10 (5) | Low (Uniform (0.05, 0.3)) | ||||
| 11–20 (2) | Moderate (Uniform (0.3, 0.7)) | ||||
| >20 (2) | High (Uniform (0.7, 1)) | ||||
| 8. Destination of sale stock | Abattoir Saleyard Farm | Proportion of a sheep moved off a property to abattoirs (Prop_Abs_S), saleyards (Prop_Saleyard_S), and direct to farm (Prop_Farm_S) | Beta ( 114 sheep movements ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 9. Visitors to the property | Live vectors Fomites Vehicles | Proportion of pathways in which the FMD virus could spread from a sheep property including humans and dogs (Prop_Lvector_S), fomites (Prop_Fomite_S), and vehicles (Prop_Vehicle_S) | Live vectors: Pert (4, 20, 45) ( Prop_Lvector_S = Prop_Fomite_S = Prop_Vehicle_S = | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 10. Disinfection of vehicles | Yes No | Probability of a contractor, feed truck, and stock movement vehicle being disinfected after coming into contact with sheep and sheep areas on the property (Prob_Disinfect_S) | Uniform (0.10, 0.33) 215 contractor vehicles, 22 clean their vehicles 12 producers, 4 producers ensure vehicles are clean | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 11. Hygiene practices | Yes No | Probability that external personnel will take hygiene precautions between properties (Prob_Hyg_S) | Uniform (0.16, 0.53) 12 producers, 2 producers request clean equipment 870 producers, 465 ensure equipment is clean | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( | |
| 12. Neighboring enterprises | Cattle Sheep | Proportion of livestock enterprises surrounding sheep properties including cattle (Prop_Cattle_S) and sheep (Prop_Sheep_S) enterprises | Beta ( 43 neighboring enterprises in total ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 13. Shared boundary with neighboring stock | Yes No | Probability that a sheep flock will share a boundary with an adjacent livestock enterprise (Prob_nBound_S) | Beta ( 50 boundaries ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 14. Exposure | Yes No | Probability that FMD will spread to neighboring properties as a result of aerosol transmission from sheep to cattle (PI_S2C_S) and sheep to sheep (PI_S2S_S) | PI_S2C_S = Low (Uniform (0.05, 0.3)) PI_S2S_S = Very Low (Uniform (0.001, 0.05)) | ( | |
| 15. Dead stock disposal method | Burnt/burial/lime No disposal | Probability that a carcass is disposed of by burial, incineration or lime (Prob_Dispose_S) | Beta ( 12 producers ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 16. Control of scavenging wildlife | Yes No | Probability that a producer will employ control strategies to prevent the scavenging of dead carcasses by wildlife (Prob_cScav_S) | Beta ( 12 producers ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 17. Wildlife found on property | Pigs Ungulates Kangaroos/foxes Vermin | Proportion of wildlife, which commercial NSW sheep producers are exposed to including pigs (Prop_wPig_S), ungulates (Prop_Ungulate_S), kangaroos and foxes (Prop_Native_S), and rodents (Prop_Vermin_S) | Beta ( 30 potential contacts with wildlife ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
| 18. Control of wildlife | Yes No | Probability that there is an appropriate control method for wildlife including pigs (Prob_cPig_S), ungulates (Prob_cUngulate_S), kangaroos and foxes (Prob_cNative_S), and rodents (Prob_cVermin_S) | Beta ( Pigs: 3 reported contact ( Ungulates: 3 reported contact ( Rodents: 12 reported contact ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) | |
Predicted median (5 and 95%) of the probability of spread of foot-and-mouth disease from commercial sheep enterprises in New South Wales (Australia) through different pathways.
| Spread pathways of FMD from commercial sheep flocks | Median | 5–95% |
|---|---|---|
| No spread/limited spread | 0.124 | 0.066–0.173 |
| Sheep movement | 0.285 | 0.161–0.462 |
| Carriers | 0.315 | 0.171–0.527 |
| Neighbors | 0.603 | 0.504–0.698 |
| Dead stock | 0.168 | 0.070–0.312 |
| Wildlife | 0.523 | 0.404–0.638 |
.
Figure 6Results of the sensitivity analysis representing the influence of different input variables on the median (horizontal line) of exposure of a commercial sheep flock to foot-and-mouth disease (FMD) from (A) introduced stock; (B) potential carriers (humans, dogs, and vehicles); (C) wildlife; and (D) neighboring livestock enterprises in New South Wales, Australia. Results were obtained from a simulation of 5,000 iterations using @Risk’s Advanced Sensitivity Analysis. [Prob_Intro, probability that a producer will introduce a FMD-infected sheep; Prob_Quar, probability that new stock will be adequately quarantined (Prob_Isolate + Prob_sBound + Prob_q21); Prob_Inspect, probability that a producer will individually inspect new sheep; Prob_ID, probability that a producer will identify FMD-specific lesions as unusual; Prob_Report, probability that producer will contact veterinarian or government agency; Prob_Hyg, probability that external personnel will take hygiene precautions between properties; Prob_Disinfect, probability that vehicles will be disinfected before entering a property; Prob_cUngulate, probability that producers will control wild deer and goats; Prob_cNative, probability that producers will control kangaroos and foxes; Prob_cVermin, probability that producers will control rodents; Prob_GwC, probability that sheep graze with cattle; Prob_nBound, probability that a sheep flock shares a boundary with an adjacent livestock enterprise].
Figure 7Results of the sensitivity analysis representing the influence of different input variables on the median (horizontal line) of foot-and-mouth disease (FMD) limited to no spread from a commercial sheep flock in New South Wales, Australia. Results were obtained from a simulation of 5,000 iterations using @Risk’s Advanced Sensitivity Analysis. (Prob_GwC_S, probability that sheep graze with cattle; Prob_IDcattle_S, probability that FMD will be detected in cattle; Prob_EarlyID_S, probability that FMD will be detected in sheep early enough to limit disease spread; Prob_ID_S, probability that a producer will identify FMD-specific lesions as unusual; Prob_Report_S, probability that producer will contact veterinarian or government agency).
Figure 8Results of the sensitivity analysis investigating the impact of the highly influential and uncertain input parameters to the outputs of the corresponding models (described in the title of each boxplot). Results were obtained from a simulation of 5,000 iterations run for each of the values used (minimum, median, and maximum) of the probability distribution of the input parameters. (Prob_nBound, probability that a sheep flock shares a boundary with an adjacent livestock enterprise; Prob_Hyg, probability that external personnel will take hygiene precautions between properties; Prob_IDcattle_S, probability that FMD will be detected in cattle).
Nodes, parameter estimates, and input values used for the exposure assessment evaluating the exposure of sheep to foot-and-mouth disease (FMD) through contact with wildlife among commercial sheep properties in New South Wales, Australia.
| Node | Branch of node | Parameter estimates | Input value | Data sources |
|---|---|---|---|---|
| 1. Wildlife found on property | Pigs Ungulates Kangaroos/foxes Vermin | Proportion of wildlife, which commercial NSW sheep producers are exposed to including pigs (Prop_wPigs), ungulates (Prop_Ungulate), kangaroos and foxes (Prop_Native) and rodents (Prop_Vermin) | Beta ( 30 potential contacts with wildlife ( | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) |
| 2. Control of wildlife | Yes No | Probability that there is an appropriate control method for wildlife including ungulates (Prob_cUngulate), kangaroos and foxes (Prob_cNative), and rodents (Prob_cVermin) | Beta ( Ungulates: 3 reported contact ( | As node 1 |
| 3. Supplementary feed provided to sheep | Yes No | Probability that supplementary feed will be provided to commercial sheep (Prob_Supp) | Beta ( 12 producers ( | As node 1 |
| 4. Probability of infection | Yes No | Probability of infection of FMD from ungulates (PI_Ungulate), kangaroos and foxes (PI_Native), rodents (PI_Vermin), and pigs (PI_wPigs) to sheep after exposure has occurred | PI_Ungulate = Moderate (uniform (0.3, 0.7)) PI_Native = Very low (uniform (0.001, 0.05)) PI_Vermin = Very low (uniform (0.001, 0.05)) PI_wPigs = High (uniform (0.7, 1)) | ( |
Nodes, parameter estimates, and input values used for the exposure assessment evaluating the exposure of sheep to foot-and-mouth disease (FMD) through potential carriers among commercial sheep properties in New South Wales, Australia.
| Node | Branch of node | Parameter estimates | Input value | Data sources |
|---|---|---|---|---|
| 1. Visitors to the property | Live vectors Fomites Vehicles | Proportion of pathways in which the FMD virus could be introduced to a sheep property including humans and dogs (Prop_Lvector), fomites (Prop_Fomite), and vehicles (Prop_Vehicle) | Live vectors: Pert (4, 20, 45) (l); fomites: Pert (1, 17, 43) (f); vehicles: Pert (4, 8, 25) (v). Prop_Lvector = Prop_Fomite = Prop_Vehicle = | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) |
| 2. Hygiene practices | Yes No | Probability that external personnel will take hygiene precautions between properties (Prob_Hyg) | Uniform (0.16, 0.53) 12 producers, 2 producers request clean equipment 870 producers; 465 ensure equipment is clean | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 3. Disinfection of vehicles | Yes No | Probability of a contractor, feed truck, and stock movement vehicle being disinfected before coming into contact with sheep and sheep areas on the property (Prob_Disinfect) | Uniform (0.10, 0.33) 215 contractor vehicles, 22 clean their vehicles 12 producers, 4 producers ensure vehicles are clean | Qualitative study among 12 commercial sheep producers in New South Wales (Australia) ( |
| 4. Type of vehicle | Livestock vehicle Contractors Feed truck | Proportion of vehicle types that may enter a sheep property including stock movement vehicles (Prop_Courier), personnel (Prop_Contract), and feed trucks (Prop_Feed) | Beta ( 177 vehicles ( | As node 1 |
| 5. Probability of infection | Yes No | Probability of sheep being exposed and infected with FMD from fomites (PI_Fomites), humans and dogs (PI_Lvector), livestock movement vehicles (PI_Courier), personnel (PI_Contract), and supplementary feed vehicles (PI_Feed) | PI_Fomites = Moderate (uniform (0.3, 0.7)) PI_Lvector = Low (uniform (0.05, 0.3)) PI_Courier = Moderate (uniform (0.3, 0.7)) PI_Contract = Low (uniform (0.05, 0.3)) PI_Feed = Very Low (uniform (0.001, 0.05)) | ( |