| Literature DB >> 29755699 |
Richard Greil1,2,3, Lisa Pleyer1,2,3, Bettina Jansko1, Carmen Feierabend1, Lukas Rettenbacher4, Olga Stiefel5, Christoph Rass1, Patrick Morre1, Daniel Neureiter3,6, Sigrun Greil-Ressler1.
Abstract
Primary resistant Hodgkin lymphoma is an aggressive disease with few treatment options and short survival. Neoplastic cells of classical Hodgkin lymphoma are heavily dependent on microenvironmental stimuli, regularly express PD-L1, and a relevant proportion of relapsed patients is sensitive to blocking of the PD1/PD-L1 axis. However, response duration is limited and further treatment options are unknown but urgently needed. We report a case of a patient without relevant response to five subsequent chemotherapy regimens who immediately and dramatically responded to an anti-PD1 mab. During the following two years she responded to the anti-CTLA-4 mab ipilimumab, the Jak2 inhibitor ruxolitinib, and a combination of lenalidomide plus cyclophosphamide given in subsequent relapses. A thorough genomic analysis demonstrated seven genomic alterations with six of them not previously described in this disease (i.e. BRIP1 G212fs*62, KRAS L19F, KDM5A R1239W, MYC A59T, ARIDA1A E1683fs*15 and TP53 277Y). Three alterations were considered actionable and one of them drugable. The number of mutations increased over time and the BRIP1 mutation was found to be a germline mutation.Entities:
Keywords: gene mutations; immunotherapy; lymphoma; molecular targets
Year: 2018 PMID: 29755699 PMCID: PMC5945535 DOI: 10.18632/oncotarget.25037
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Course of disease under immunologic treatment
(A) CT scan showing massively enlarged axillary and subdiaphragmal lymph nodes prior to the start of nivolumab, (B) CT control two months after start of nivolumab showing massive regression of nodes in both regions, (C) 18FDG PET/CT in progression during nivolumab and prior to start of ipilimumab (D) treatment response during ipilimumab (E) 18FDG PET/CT cervical, axillary , and subdiaphragmal lymph node progression after ipilimumab and prior to start of ruxolitinib (F) 18FDG PET showing ruxolitinib-induced remission.
Figure 2Immunohistochemistry
Three lymph node biopsies were taken in May 2008 (initial diagnosis, column 1), in progression after 8 cycles of nivolumab (August 2015, column 2), and after 12 cycles of nivolumab and treatment with 7 cycles of ipilimumab (June 2016, column 3). The obtained specimens were comprehensively analysed for diagnostic (CD15, CD30, PAX5, LMP, In-situ-Hybridization for EBER, CD4 and CD8) and possible therapeutic (PD-L1, PD1, CTLA4, LAG3, IL7R (CD127) and BTLA (CD272)) purposes with immunohistochemistry. First, the histomorphological Reed Sternberg and Hodgkin cells could be detected with CD15 and CD30 (lane a) and PAX5 (weak, lane b). An EBV-association was excluded by negative staining for LMP1 and in-situ-hybridization for EBER (lane b). Second, PD-L1 expression on Hodgkin cells decreased from the initial biopsy with the highest protein expression pattern in comparison to biopsies taken in relapse after treatment with nivolumab and ipilimumab (lane d). Interestingly, the PD1 expression (lane d) in the surrounding Hodgkin-associated lymphocytic bystander population with predominant CD4-positive phenotype (lane c) was low. Third, intensive analysis of the immunological checkpoint proteins CTLA4, LAG3, IL7R (CD127) and BTLA (CD272) revealed an increase of CTLA4 and a decrease of IL7R and BTLA by continuously low expression pattern for LAG3 throughout the different time periods (lanes e to h). (Note that the first antigen designated at the left side of each lane always depicts the left part of the microphotograph, whereas the antigen given after the slash describes the relevant right part of the photo, respectively. Magnification of 1 × 400 for all immunohistochemical pictures).
Results from NGS testing
| Genomic finding detected | Previously described in Hodgkin lymphoma1 | FDA-approved therapies in patients’ tumor type | FDA-approved therapies in another tumor type | Potential clinical trials |
|---|---|---|---|---|
| BRIP1 G212fs*622 | Not found in any of 9 Hodgkin lymphoma cases in the Cosmic database (Dec 2016); | None | Olaparib3 | NCT00576654 |
| KDM5A R1239W | No reports in Hodgkin lymphoma | None | None | None |
| KRAS L19F | Not identified in 48 Hodgkin lymphoma samples analyzed in COSMIC database (Dec 2016), no significant reports in Pubmed /August 2017) | None | Trametinib, Cobimetinib | NCT01742988 |
| MYC A59T | No MYC mutation found in 9 cases of Hodgkin lymphoma analyzed in COSMIC database (August 2017) | None | None | NCT02431260 |
| ARIDA1A E1683fs*15 4 | No reports | None | None | None |
| B2M M1R | Inactivating mutations described in classical Hodgkin lymphoma | None | None | None |
| TP53 C277Y | No descriptions in Hodgkin lymphoma | None | None | None |
1Data is given according to reports from FoundationOne. Descriptions are given according to COSMIC database.
2BRIP1 G212fs*62 equivalent to FANCJ (Fanconi Anemia complementation group J). The gene is considered important for DNA repair and maintenance of chromosomal stability. The observed alteration disrupts the BRCA1 binding site and is predicted to be inactivating.
3A patient with serous ovarian cancer harboring a BRIP1 mutation exhibited a long-lasting response to olaparib [47].
4ARIDA1A is supposed to be a tumor suppressor and part of the chromatin remodeling complex. Mutations are reported to occur in 2% of hematopoietic and lymphoid malignancies (COSMIC 2016). ARIDA 1 expression has been associated with dexamethasone resistance [59].
Variants of unknown significance: CAD P1465L, DDX3XA541V, FLT1 R1257C, GNA13 E138QK121fs*4, HDAC4 Q154H, KDM4C S436G, MAFB H166R, PCLo R3605Q, PDGFRA T200S, RELN P672L, SDHA G3V, SETB1 K1341E, TSC1 N762S, Tumor mutation burden unknown, XPO1 R231I, ZNF703 A401–H402insPTH LGGSSCSTCSA.
Genomic alterations in lymph node biopsies, liquid biopsy and germline
| Time point after x lines of therapy | Most recent therapy | Subsequent therapy | Tissue | Genomic Findings |
|---|---|---|---|---|
| Chemo-naive, May 2008 | None | BEACOPP escalated | pretracheal lymph node1 | (1)BRIP1 G212fs*62 |
| August 2015, | 8 cycles of nivolumab | 4 cycles of nivolumab | lymph node cervical/supraclavicular1 | (1)BRIP1 G212fs*62 |
| June, 2016 | 8 lines of therapy including nivolumab and ipilimumab | ruxolitinib | lymph node accessorius region left2 | (1)BRIP1 G212fs*62 |
| July 2017 | ruxolitinib | cyclophos-phamide/lenalidomide | peripheral blood2 | (1)BRIP1 G212fs*62 |
| July and October 2017 | cyclophos-phamide/ | treatment ongoing | buccal swap3 | 1)BRIP1 G212fs*62 |
1Results according to Foundation One which interrogates 315 genes as well as introns of 28 genes involved in rearrangements.
2 Results according to Foundation One Hem test which analyzes 406 genes as well as selected introns of 31 genes involved in gene rearrangements, and performs RNA sequencing of 265 genes.
3 performed in house (for details see Material and Methods section and Figure 3). With the only exception of B2MG, all genes are tested in both test systems.
With the exception of the B2MG gene, all genes analyzed were included in both panels of Foundation One.
Figure 3PCR sequencing of germline DNA
(A) IGV Alignment BRIP1 G212fs*62: BRIP1 G212fs*62 mutation was detected in buccal swab DNA and in peripheral blood DNA of the patient. The forward and reverse sequence alignment stops at G212 due to the frameshift in the mutated sample. Negative control sample aligns perfectly to the reference sequence. BRIP1: reference sequence of BRIP NM_032043; BuccalSwabRev: DNA from buccal swab of the patient (reverse strand); BuccalSwabFor: DNA from buccal swab of the patient (forward strand); PBRev: DNA from peripheral blood (PB) of the patient (reverse strand); PBFor: DNA from PB of patient (forward strand), negRev: negative control DNA from PB (reverse strand); negFor: negative control DNA from PB (forward strand). (B) BRIP1 nucleotide insertion leads to a frameshift mutation. (C) IGV Alignment TP53 Exon 8: TP53 C277Y mutation could not be detected in buccal swab DNA. Alignments are identical to the reference sequence. TP53: reference sequence (NM_001126114), TP53 buccal For: DNA from buccal swab of patient. TP53buccal Rev: DNA from buccal swab of patient.