Literature DB >> 29751996

Update on Tumor Neoantigens and Their Utility: Why It Is Good to Be Different.

Chung-Han Lee1, Roman Yelensky2, Karin Jooss2, Timothy A Chan3.   

Abstract

Antitumor rejection by the immune system is a complex process that is regulated by several factors. Among these factors are the quality and quantity of mutational events that occur in cancer cells. Perhaps one of the most important types of mutations that influence antitumor immunity is the neoantigen, that is, a non-self-antigen that arises as a result of somatic mutation. Recent work has demonstrated that neoantigens hold significant promise for developing new diagnostic and therapeutic modalities. Therapeutic targeting of neoantigens is important for achieving benefit following therapy with immune checkpoint blockade agents or for cancer vaccines targeting mutations. Here, we review our understanding of neoantigens and discuss new developments in the quest to use them in cancer immunotherapy.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29751996      PMCID: PMC7954132          DOI: 10.1016/j.it.2018.04.005

Source DB:  PubMed          Journal:  Trends Immunol        ISSN: 1471-4906            Impact factor:   16.687


  92 in total

1.  Landscape of immunogenic tumor antigens in successful immunotherapy of virally induced epithelial cancer.

Authors:  Sanja Stevanović; Anna Pasetto; Sarah R Helman; Jared J Gartner; Todd D Prickett; Bryan Howie; Harlan S Robins; Paul F Robbins; Christopher A Klebanoff; Steven A Rosenberg; Christian S Hinrichs
Journal:  Science       Date:  2017-04-14       Impact factor: 47.728

2.  Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patients.

Authors:  Alena Gros; Maria R Parkhurst; Eric Tran; Anna Pasetto; Paul F Robbins; Sadia Ilyas; Todd D Prickett; Jared J Gartner; Jessica S Crystal; Ilana M Roberts; Kasia Trebska-McGowan; John R Wunderlich; James C Yang; Steven A Rosenberg
Journal:  Nat Med       Date:  2016-02-22       Impact factor: 53.440

3.  Insertion-and-deletion-derived tumour-specific neoantigens and the immunogenic phenotype: a pan-cancer analysis.

Authors:  Samra Turajlic; Kevin Litchfield; Hang Xu; Rachel Rosenthal; Nicholas McGranahan; James L Reading; Yien Ning S Wong; Andrew Rowan; Nnennaya Kanu; Maise Al Bakir; Tim Chambers; Roberto Salgado; Peter Savas; Sherene Loi; Nicolai J Birkbak; Laurent Sansregret; Martin Gore; James Larkin; Sergio A Quezada; Charles Swanton
Journal:  Lancet Oncol       Date:  2017-07-07       Impact factor: 41.316

4.  MHC class I-associated peptides derive from selective regions of the human genome.

Authors:  Hillary Pearson; Tariq Daouda; Diana Paola Granados; Chantal Durette; Eric Bonneil; Mathieu Courcelles; Anja Rodenbrock; Jean-Philippe Laverdure; Caroline Côté; Sylvie Mader; Sébastien Lemieux; Pierre Thibault; Claude Perreault
Journal:  J Clin Invest       Date:  2016-11-14       Impact factor: 14.808

5.  CD4+ T Cell Tolerance to Tissue-Restricted Self Antigens Is Mediated by Antigen-Specific Regulatory T Cells Rather Than Deletion.

Authors:  Francois P Legoux; Jong-Baeck Lim; Andrew W Cauley; Stanislav Dikiy; James Ertelt; Thomas J Mariani; Tim Sparwasser; Sing Sing Way; James J Moon
Journal:  Immunity       Date:  2015-11-10       Impact factor: 31.745

6.  Tumor Mutational Burden and Response Rate to PD-1 Inhibition.

Authors:  Mark Yarchoan; Alexander Hopkins; Elizabeth M Jaffee
Journal:  N Engl J Med       Date:  2017-12-21       Impact factor: 91.245

7.  Checkpoint blockade cancer immunotherapy targets tumour-specific mutant antigens.

Authors:  Matthew M Gubin; Xiuli Zhang; Heiko Schuster; Etienne Caron; Jeffrey P Ward; Takuro Noguchi; Yulia Ivanova; Jasreet Hundal; Cora D Arthur; Willem-Jan Krebber; Gwenn E Mulder; Mireille Toebes; Matthew D Vesely; Samuel S K Lam; Alan J Korman; James P Allison; Gordon J Freeman; Arlene H Sharpe; Erika L Pearce; Ton N Schumacher; Ruedi Aebersold; Hans-Georg Rammensee; Cornelis J M Melief; Elaine R Mardis; William E Gillanders; Maxim N Artyomov; Robert D Schreiber
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

8.  Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation.

Authors:  Michal Bassani-Sternberg; Sune Pletscher-Frankild; Lars Juhl Jensen; Matthias Mann
Journal:  Mol Cell Proteomics       Date:  2015-01-09       Impact factor: 5.911

9.  Mutational heterogeneity in cancer and the search for new cancer-associated genes.

Authors:  Michael S Lawrence; Petar Stojanov; Paz Polak; Gregory V Kryukov; Kristian Cibulskis; Andrey Sivachenko; Scott L Carter; Chip Stewart; Craig H Mermel; Steven A Roberts; Adam Kiezun; Peter S Hammerman; Aaron McKenna; Yotam Drier; Lihua Zou; Alex H Ramos; Trevor J Pugh; Nicolas Stransky; Elena Helman; Jaegil Kim; Carrie Sougnez; Lauren Ambrogio; Elizabeth Nickerson; Erica Shefler; Maria L Cortés; Daniel Auclair; Gordon Saksena; Douglas Voet; Michael Noble; Daniel DiCara; Pei Lin; Lee Lichtenstein; David I Heiman; Timothy Fennell; Marcin Imielinski; Bryan Hernandez; Eran Hodis; Sylvan Baca; Austin M Dulak; Jens Lohr; Dan-Avi Landau; Catherine J Wu; Jorge Melendez-Zajgla; Alfredo Hidalgo-Miranda; Amnon Koren; Steven A McCarroll; Jaume Mora; Brian Crompton; Robert Onofrio; Melissa Parkin; Wendy Winckler; Kristin Ardlie; Stacey B Gabriel; Charles W M Roberts; Jaclyn A Biegel; Kimberly Stegmaier; Adam J Bass; Levi A Garraway; Matthew Meyerson; Todd R Golub; Dmitry A Gordenin; Shamil Sunyaev; Eric S Lander; Gad Getz
Journal:  Nature       Date:  2013-06-16       Impact factor: 49.962

10.  Protective CD8+ T-cell immunity to human malaria induced by chimpanzee adenovirus-MVA immunisation.

Authors:  Katie J Ewer; Geraldine A O'Hara; Christopher J A Duncan; Katharine A Collins; Susanne H Sheehy; Arturo Reyes-Sandoval; Anna L Goodman; Nick J Edwards; Sean C Elias; Fenella D Halstead; Rhea J Longley; Rosalind Rowland; Ian D Poulton; Simon J Draper; Andrew M Blagborough; Eleanor Berrie; Sarah Moyle; Nicola Williams; Loredana Siani; Antonella Folgori; Stefano Colloca; Robert E Sinden; Alison M Lawrie; Riccardo Cortese; Sarah C Gilbert; Alfredo Nicosia; Adrian V S Hill
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  54 in total

1.  PD-L1 expression and tumor mutational burden are independent biomarkers in most cancers.

Authors:  Mark Yarchoan; Lee A Albacker; Alexander C Hopkins; Meagan Montesion; Karthikeyan Murugesan; Teena T Vithayathil; Neeha Zaidi; Nilofer S Azad; Daniel A Laheru; Garrett M Frampton; Elizabeth M Jaffee
Journal:  JCI Insight       Date:  2019-03-21

2.  Neoantigen Dissimilarity to the Self-Proteome Predicts Immunogenicity and Response to Immune Checkpoint Blockade.

Authors:  Lee P Richman; Robert H Vonderheide; Andrew J Rech
Journal:  Cell Syst       Date:  2019-10-09       Impact factor: 10.304

3.  Molecular biology of oral cavity squamous cell carcinoma.

Authors:  Phillip J Hsu; Kenneth Yan; Hailing Shi; Evgeny Izumchenko; Nishant Agrawal
Journal:  Oral Oncol       Date:  2020-01-07       Impact factor: 5.337

Review 4.  Neoantigen prediction and computational perspectives towards clinical benefit: recommendations from the ESMO Precision Medicine Working Group.

Authors:  L De Mattos-Arruda; M Vazquez; F Finotello; R Lepore; E Porta; J Hundal; P Amengual-Rigo; C K Y Ng; A Valencia; J Carrillo; T A Chan; V Guallar; N McGranahan; J Blanco; M Griffith
Journal:  Ann Oncol       Date:  2020-06-28       Impact factor: 32.976

5.  Evolving neoantigen profiles in colorectal cancers with DNA repair defects.

Authors:  Giuseppe Rospo; Annalisa Lorenzato; Nabil Amirouchene-Angelozzi; Alessandro Magrì; Carlotta Cancelliere; Giorgio Corti; Carola Negrino; Vito Amodio; Monica Montone; Alice Bartolini; Ludovic Barault; Luca Novara; Claudio Isella; Enzo Medico; Andrea Bertotti; Livio Trusolino; Giovanni Germano; Federica Di Nicolantonio; Alberto Bardelli
Journal:  Genome Med       Date:  2019-06-28       Impact factor: 11.117

6.  Adoptive T-Cell Transfer to Treat Lymphangioleiomyomatosis.

Authors:  Fei Han; Emilia R Dellacecca; Levi W Barse; Cormac Cosgrove; Steven W Henning; Christian M Ankney; Dinesh Jaishankar; Alexander Yemelyanov; Vera P Krymskaya; Daniel F Dilling; I Caroline Le Poole
Journal:  Am J Respir Cell Mol Biol       Date:  2020-06       Impact factor: 6.914

7.  Detecting Tumor Antigen-Specific T Cells via Interaction-Dependent Fucosyl-Biotinylation.

Authors:  Zilei Liu; Jie P Li; Mingkuan Chen; Mengyao Wu; Yujie Shi; Wei Li; John R Teijaro; Peng Wu
Journal:  Cell       Date:  2020-10-22       Impact factor: 41.582

Review 8.  Harnessing neoantigen specific CD4 T cells for cancer immunotherapy.

Authors:  Spencer E Brightman; Martin S Naradikian; Aaron M Miller; Stephen P Schoenberger
Journal:  J Leukoc Biol       Date:  2020-03-14       Impact factor: 4.962

9.  Comprehensive Genomic Analysis of Translocation Renal Cell Carcinoma Reveals Copy-Number Variations as Drivers of Disease Progression.

Authors:  Renzo G DiNatale; Alejandro Sanchez; A Ari Hakimi; Ed Reznik; Julian Marcon; Ritesh R Kotecha; Sounak Gupta; Fengshen Kuo; Vladimir Makarov; Amar Sandhu; Roy Mano; Andrew W Silagy; Kyle A Blum; Daniel E Nassau; Nicole E Benfante; Michael V Ortiz; Maria I Carlo; Timothy A Chan; Robert J Motzer; Martin H Voss; Jonathan Coleman; Paul Russo; Victor Reuter
Journal:  Clin Cancer Res       Date:  2020-03-27       Impact factor: 12.531

Review 10.  Polyomavirus-driven Merkel cell carcinoma: Prospects for therapeutic vaccine development.

Authors:  Shira Tabachnick-Cherny; Thomas Pulliam; Candice Church; David M Koelle; Paul Nghiem
Journal:  Mol Carcinog       Date:  2020-03-27       Impact factor: 4.784

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