Literature DB >> 29748278

Recent Asian origin of chytrid fungi causing global amphibian declines.

Simon J O'Hanlon1,2, Adrien Rieux3, Rhys A Farrer4, Gonçalo M Rosa2,5,6, Bruce Waldman7, Arnaud Bataille7,8, Tiffany A Kosch7,9, Kris A Murray4, Balázs Brankovics10,11, Matteo Fumagalli12,13, Michael D Martin14,15, Nathan Wales15, Mario Alvarado-Rybak16, Kieran A Bates4,2, Lee Berger9, Susanne Böll17, Lola Brookes2, Frances Clare4,2, Elodie A Courtois18, Andrew A Cunningham2, Thomas M Doherty-Bone19, Pria Ghosh4,20, David J Gower21, William E Hintz22, Jacob Höglund23, Thomas S Jenkinson24, Chun-Fu Lin25, Anssi Laurila23, Adeline Loyau26,27, An Martel28, Sara Meurling23, Claude Miaud29, Pete Minting30, Frank Pasmans28, Dirk S Schmeller26,27, Benedikt R Schmidt31, Jennifer M G Shelton4, Lee F Skerratt9, Freya Smith2,32, Claudio Soto-Azat16, Matteo Spagnoletti13, Giulia Tessa33, Luís Felipe Toledo34, Andrés Valenzuela-Sánchez16,35, Ruhan Verster20, Judit Vörös36, Rebecca J Webb9, Claudia Wierzbicki4, Emma Wombwell2, Kelly R Zamudio37, David M Aanensen4,38, Timothy Y James24, M Thomas P Gilbert14,15, Ché Weldon20, Jaime Bosch39, François Balloux13, Trenton W J Garner2,20,33, Matthew C Fisher1.   

Abstract

Globalized infectious diseases are causing species declines worldwide, but their source often remains elusive. We used whole-genome sequencing to solve the spatiotemporal origins of the most devastating panzootic to date, caused by the fungus Batrachochytrium dendrobatidis, a proximate driver of global amphibian declines. We traced the source of B. dendrobatidis to the Korean peninsula, where one lineage, BdASIA-1, exhibits the genetic hallmarks of an ancestral population that seeded the panzootic. We date the emergence of this pathogen to the early 20th century, coinciding with the global expansion of commercial trade in amphibians, and we show that intercontinental transmission is ongoing. Our findings point to East Asia as a geographic hotspot for B. dendrobatidis biodiversity and the original source of these lineages that now parasitize amphibians worldwide.
Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2018        PMID: 29748278      PMCID: PMC6311102          DOI: 10.1126/science.aar1965

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  30 in total

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4.  Emerging infectious disease as a proximate cause of amphibian mass mortality.

Authors:  Lara J Rachowicz; Roland A Knapp; Jess A T Morgan; Mary J Stice; Vance T Vredenburg; John M Parker; Cheryl J Briggs
Journal:  Ecology       Date:  2006-07       Impact factor: 5.499

5.  Coincident mass extirpation of neotropical amphibians with the emergence of the infectious fungal pathogen Batrachochytrium dendrobatidis.

Authors:  Tina L Cheng; Sean M Rovito; David B Wake; Vance T Vredenburg
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-04       Impact factor: 11.205

6.  Amphibian chytridiomycosis in Japan: distribution, haplotypes and possible route of entry into Japan.

Authors:  Koichi Goka; Jun Yokoyama; Yumi Une; Toshiro Kuroki; Kazutaka Suzuki; Miri Nakahara; Arei Kobayashi; Shigeki Inaba; Tomoo Mizutani; Alex D Hyatt
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7.  OrthoMCL: identification of ortholog groups for eukaryotic genomes.

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8.  Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage.

Authors:  Rhys A Farrer; Lucy A Weinert; Jon Bielby; Trenton W J Garner; Francois Balloux; Frances Clare; Jaime Bosch; Andrew A Cunningham; Che Weldon; Louis H du Preez; Lucy Anderson; Sergei L Kosakovsky Pond; Revital Shahar-Golan; Daniel A Henk; Matthew C Fisher
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  81 in total

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Review 5.  Chytrid fungi and global amphibian declines.

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Journal:  Nat Rev Microbiol       Date:  2020-02-25       Impact factor: 60.633

6.  Frog Virus 3 Genomes Reveal Prevalent Recombination between Ranavirus Lineages and Their Origins in Canada.

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7.  Ancestral chytrid pathogen remains hypervirulent following its long coevolution with amphibian hosts.

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9.  First report of Euryhelmis parasites (Trematoda, Heterophyidae) in Africa: conservation implications for endemic amphibians.

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10.  Mind the Outgroup and Bare Branches in Total-Evidence Dating: a Case Study of Pimpliform Darwin Wasps (Hymenoptera, Ichneumonidae).

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