| Literature DB >> 29740481 |
Fei Ye1, Yi Gong1, Xiangheng Chen1, Meiying Yu1, Zhongkun Zuo1, Dongni Pei1, Wei Liu1, Qunwei Wang1, Jun Zhou1, Lunxi Duan1, Leiyi Zhang1, Xiaojing Li1, Tenglong Tang1, Jiangsheng Huang1.
Abstract
Long noncoding RNA serves important roles in gastric cancer (GC). However, the prognostic significance and tumorigenesis effect of AFAP1-antisense RNA 1 (AS1) in GC remain to be clarified. The present study was conducted in order to determine the expression level of AFAP1-AS1 by reverse transcription-quantitative polymerase chain reaction. It was demonstrated that AFAP1-AS1 expression level was higher in GC tissues in comparison with adjacent tissues. By analyzing 66 GC tissue specimens, AFAP1-AS1 expression level was found to be markedly associated with tumor size, clinical stage and differentiation. By performing multivariate Cox regression test, AFAP1-AS1 expression level was confirmed to be an independent factor for poor prognosis in patients with GC. Furthermore, SGC-7901 and BGC-823 cells were used for further investigation following transfection of an AFAP1-AS1 short hairpin RNA lentiviral vector. Knockdown of AFAP1-AS1 significantly inhibited GC cell proliferation, migration and invasion abilities in vitro. Finally, nude mice experiments confirmed that downregulation of AFAP1-AS1 in GC cells suppressed tumor growth in vivo. In conclusion, the results of the present study suggested that AFAP1-AS1 may serve as a valuable prognostic indicator and therapeutic target for GC.Entities:
Keywords: AFAP1-antisense RNA 1; gastric cancer; long noncoding RNA; prognosis; proliferation
Year: 2018 PMID: 29740481 PMCID: PMC5934723 DOI: 10.3892/ol.2018.8266
Source DB: PubMed Journal: Oncol Lett ISSN: 1792-1074 Impact factor: 2.967
Sequences of the insertions in vectors and primers.
| Name | Sequence |
|---|---|
| Insertion vector | |
| sh1AFAP1-AS1 | F: 5′-CCGGAACACCAATCCCAAGAGGTGACTCGAGTCACCTCTTGGGATTGGTGTTTTTTTG-3′ |
| R: 5′-AATTCAAAAAAACACCAATCCCAAGAGGTGACTCGAGTCACCTCTTGGGATTGGTGTT-3′ | |
| sh2AFAP1-AS1 | F: 5′-CCGGAGCGGTCTCAGCCGAATGACTCTCGAGAGTCATTCGGCTGAGACCGCTTTTTTG-3′ |
| R: 5′-AATTCAAAAAAGCGGTCTCAGCCGAATGACTCTCGAGAGTCATTCGGCTGAGACCGCT-3′ | |
| shNC | F: 5′-CCGGTTTCTCCGAACGTGTCACGTCTCGAGACGTGACACGTTCGGAGAATTTTTG-3′ |
| R: 5′-AATTCAAAAAGTTCTCCGAACGTGTCACGTCTCGAGACGTGACACGTTCGGAGAA-3′ | |
| Primer | |
| AFAP1-AS1 | F: 5′-TCGCTCAATGGAGTGACGGCA-3′ |
| R: 5′-CGGCTGAGACCGCTGAGAACTT-3′ | |
| GAPDH | F: 5′-TTAGTCGTCAATGGCAACAAG-3′ |
| R: 5′-GACACCGACGACGAACATAG-3′ |
sh, short hairpin; AFAP1-AS1, AFAP1-antisense RNA 1; shNC, scrambled control shRNA; F, forward; R, reverse.
Figure 1.Expression levels of AFAP1-AS1 and clinicopathological characteristics in GC. (A) Comparison of AFAP1-AS1 expression levels in GC tissue and adjacent normal tissue. (B) AFAP1-AS1 expression levels in 66 GC tissue was determined by reverse transcription-quantified polymerase chain reaction. The relative AFAP1-AS1 level was normalized to GAPDH. *P<0.05. ANT, adjacent normal tissue; AFAP1-AS1, AFAP1-antisense RNA 1; GC, gastric cancer; n, number.
Association between AFAP1-AS1 expression level and clinicopathological characteristics of patients.
| AFAP1-AS1 expression | |||||
|---|---|---|---|---|---|
| AFAP1-AS1 | |||||
| Factors | Number | High (n=33) | Low (n=33) | χ2 | P-value |
| Age, years | 0.092 | 0.319 | |||
| <60 | 28 | 12 | 16 | ||
| ≥60 | 38 | 21 | 17 | ||
| Sex distribution | 1.746 | 0.186 | |||
| Female | 21 | 8 | 13 | ||
| Male | 45 | 25 | 20 | ||
| Family history | 1.610 | 0.205 | |||
| Positive | 25 | 15 | 10 | ||
| Negative | 41 | 18 | 23 | ||
| Ulceration | 0.262 | 0.609 | |||
| Positive | 24 | 12 | 11 | ||
| Negative | 42 | 20 | 22 | ||
| Tumor size, cm | 3.970 | 0.046 | |||
| <2 | 38 | 15 | 23 | ||
| ≥2 | 28 | 18 | 10 | ||
| Clinical stage | 10.882 | 0.001 | |||
| I–II | 41 | 14 | 27 | ||
| III–IV | 25 | 19 | 6 | ||
| Differentiation | 11.643 | 0.003 | |||
| Well | 22 | 5 | 17 | ||
| Moderate | 27 | 15 | 12 | ||
| Poor | 17 | 13 | 4 | ||
AFAP1-AS1, AFAP1-antisense RNA 1; n, number.
Multivariate analyses for overall survival by Cox regression test.
| RR 95% CI | |||||
|---|---|---|---|---|---|
| Factors | Wald | P-value | RR | Lower | Upper |
| Age | 0.057 | 0.812 | 1.134 | 0.403 | 3.189 |
| Sex distribution | 0.177 | 0.674 | 1.262 | 0.427 | 3.731 |
| Family history | 0.268 | 0.605 | 1.323 | 0.459 | 3.816 |
| Ulceration | 3.236 | 0.072 | 0.325 | 0.095 | 1.106 |
| Tumor size | 0.606 | 0.436 | 0.652 | 0.222 | 1.913 |
| Clinical stage | 4.627 | 0.031[ | 3.715 | 1.124 | 12.283 |
| Differentiation | 4.144 | 0.042[ | 0.370 | 0.142 | 0.964 |
| AFAP1-AS1 expression | 5.644 | 0.018[ | 12.297 | 1.551 | 97.474 |
P<0.05 was considered to indicate a statistically significant difference. Wald represents the χ2 value. A higher Wald value indicates a greater difference between the two groups. AFAP1-AS1, AFAP1-antisense RNA 1; CI, confidence interval.
Figure 2.Downregulation of AFAP1-AS1 inhibits GC cell proliferation ability. (A) RT-qPCR was performed to analyze the expression level of AFAP1-AS1 in SGC-7901, BGC-823 and MGC-803 GC cell lines and GES-1 human gastric epithelial cell line. (B) sh1AFAP1-AS1 and sh2AFAP1-AS1, shRNA expression vectors targeting AFAP1-AS1, and a negative control shRNA vector were transfected into SGC-7901 and BGC-823 cells, respectively. RT-qPCR results revealed that the sh1AFAP1-AS1 sequence had the greatest inhibitory effect. (C) Cell Counting Kit-8 assays were performed to examine SGC-7901 and BGC-823 cell proliferation rates at the indicated time points. The results were analyzed using one-way analysis of variance and Student's t-test, *P<0.05. RT-qPCR, reverse transcription-quantitative polymerase chain reaction; AFAP1-AS1, AFAP1-antisense RNA 1; GC, gastric cancer; sh, short hairpin; shNC, scrambled control shRNA.
Figure 3.Downregulation of AFAP1-AS1 inhibits GC cell migration and invasion ability. SGC-7901 and BGC-823 cells were used to detect the ability of migration and invasion. (A) Migration of cells into the scratched area was monitored at the indicated time points. Representative microscopic images (magnification, ×40) and the migration rates of each groups at 0 and 48 h are presented. (B) Representative microscopic images of invasive cells from the shNC and shAPAF1-AS1 groups (top panel; magnification, ×100). The relative number of invaded cells in each group was measured by determining the absorbance at 570 nm (bottom panel). Data were assessed by Student's t-test. *P<0.05. AFAP1-AS1, AFAP1-antisense RNA 1; GC, gastric cancer; sh, short hairpin; shNC, scrambled control shRNA.
Figure 4.Downregulation of AFAP1-AS1 suppresses tumor growth in vivo. (A) Growth curve of nude mice demonstrating various levels of AFAP1-AS1 expression. (B) Representative images of subcutaneous tumors at day 42. (C) Tumor volume and (D) mass of SGC-7901 and BGC-823 cell xenografts in the negative control and knockdown AFAP1-AS1 groups. The results were analyzed using Student's t-test. *P<0.05. AFAP1-AS1, AFAP1-antisense RNA 1; sh, short hairpin; shNC, scrambled control shRNA.