Literature DB >> 29734501

Using multidimensional topological data analysis to identify traits of hip osteoarthritis.

Jasmine Rossi-deVries1, Valentina Pedoia1, Michael A Samaan1,2, Adam R Ferguson3,4, Richard B Souza1,2, Sharmila Majumdar1.   

Abstract

BACKGROUND: Osteoarthritis (OA) is a multifaceted disease with many variables affecting diagnosis and progression. Topological data analysis (TDA) is a state-of-the-art big data analytics tool that can combine all variables into multidimensional space. TDA is used to simultaneously analyze imaging and gait analysis techniques.
PURPOSE: To identify biochemical and biomechanical biomarkers able to classify different disease progression phenotypes in subjects with and without radiographic signs of hip OA. STUDY TYPE: Longitudinal study for comparison of progressive and nonprogressive subjects. POPULATION: In all, 102 subjects with and without radiographic signs of hip osteoarthritis. FIELD STRENGTH/SEQUENCE: 3T, SPGR 3D MAPSS T1ρ /T2 , intermediate-weighted fat-suppressed fast spin-echo (FSE). ASSESSMENT: Multidimensional data analysis including cartilage composition, bone shape, Kellgren-Lawrence (KL) classification of osteoarthritis, scoring hip osteoarthritis with MRI (SHOMRI), hip disability and osteoarthritis outcome score (HOOS). STATISTICAL TESTS: Analysis done using TDA, Kolmogorov-Smirnov (KS) testing, and Benjamini-Hochberg to rank P-value results to correct for multiple comparisons.
RESULTS: Subjects in the later stages of the disease had an increased SHOMRI score (P < 0.0001), increased KL (P = 0.0012), and older age (P < 0.0001). Subjects in the healthier group showed intact cartilage and less pain. Subjects found between these two groups had a range of symptoms. Analysis of this subgroup identified knee biomechanics (P < 0.0001) as an initial marker of the disease that is noticeable before the morphological progression and degeneration. Further analysis of an OA subgroup with femoroacetabular impingement (FAI) showed anterior labral tears to be the most significant marker (P = 0.0017) between those FAI subjects with and without OA symptoms. DATA
CONCLUSION: The data-driven analysis obtained with TDA proposes new phenotypes of these subjects that partially overlap with the radiographic-based classical disease status classification and also shows the potential for further examination of an early onset biomechanical intervention. LEVEL OF EVIDENCE: 2 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2018;48:1046-1058.
© 2018 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  big data; cartilage; hip OA; osteoarthritis; topological data analysis

Mesh:

Year:  2018        PMID: 29734501      PMCID: PMC6174097          DOI: 10.1002/jmri.26029

Source DB:  PubMed          Journal:  J Magn Reson Imaging        ISSN: 1053-1807            Impact factor:   4.813


  37 in total

1.  Radiological assessment of osteo-arthrosis.

Authors:  J H KELLGREN; J S LAWRENCE
Journal:  Ann Rheum Dis       Date:  1957-12       Impact factor: 19.103

2.  Early T2 changes predict onset of radiographic knee osteoarthritis: data from the osteoarthritis initiative.

Authors:  Hans Liebl; Gabby Joseph; Michael C Nevitt; Nathan Singh; Ursula Heilmeier; Karupppasamy Subburaj; Pia M Jungmann; Charles E McCulloch; John A Lynch; Nancy E Lane; Thomas M Link
Journal:  Ann Rheum Dis       Date:  2014-03-10       Impact factor: 19.103

3.  T2 relaxation reveals spatial collagen architecture in articular cartilage: a comparative quantitative MRI and polarized light microscopic study.

Authors:  M T Nieminen; J Rieppo; J Töyräs; J M Hakumäki; J Silvennoinen; M M Hyttinen; H J Helminen; J S Jurvelin
Journal:  Magn Reson Med       Date:  2001-09       Impact factor: 4.668

4.  Response of knee cartilage T1rho and T2 relaxation times to in vivo mechanical loading in individuals with and without knee osteoarthritis.

Authors:  R B Souza; D Kumar; N Calixto; J Singh; J Schooler; K Subburaj; X Li; T M Link; S Majumdar
Journal:  Osteoarthritis Cartilage       Date:  2014-04-30       Impact factor: 6.576

5.  Cartilage T1ρ and T2 Relaxation Times in Patients With Mild-to-Moderate Radiographic Hip Osteoarthritis.

Authors:  Cory Wyatt; Deepak Kumar; Karupppasamy Subburaj; Sonia Lee; Lorenzo Nardo; Divya Narayanan; Drew Lansdown; Thomas Vail; Thomas M Link; Richard B Souza; Sharmila Majumdar
Journal:  Arthritis Rheumatol       Date:  2015-06       Impact factor: 10.995

6.  Longitudinal study using voxel-based relaxometry: Association between cartilage T and T2 and patient reported outcome changes in hip osteoarthritis.

Authors:  Valentina Pedoia; Matthew C Gallo; Richard B Souza; Sharmila Majumdar
Journal:  J Magn Reson Imaging       Date:  2016-09-14       Impact factor: 4.813

7.  Acetabular cartilage delamination in femoroacetabular impingement. Risk factors and magnetic resonance imaging diagnosis.

Authors:  Lucas A Anderson; Christopher L Peters; Brandon B Park; Gregory J Stoddard; Jill A Erickson; Julia R Crim
Journal:  J Bone Joint Surg Am       Date:  2009-02       Impact factor: 5.284

8.  T1ρ and T2 relaxation times are associated with progression of hip osteoarthritis.

Authors:  M C Gallo; C Wyatt; V Pedoia; D Kumar; S Lee; L Nardo; T M Link; R B Souza; S Majumdar
Journal:  Osteoarthritis Cartilage       Date:  2016-03-10       Impact factor: 6.576

9.  Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury.

Authors:  Jessica L Nielson; Jesse Paquette; Aiwen W Liu; Cristian F Guandique; C Amy Tovar; Tomoo Inoue; Karen-Amanda Irvine; John C Gensel; Jennifer Kloke; Tanya C Petrossian; Pek Y Lum; Gunnar E Carlsson; Geoffrey T Manley; Wise Young; Michael S Beattie; Jacqueline C Bresnahan; Adam R Ferguson
Journal:  Nat Commun       Date:  2015-10-14       Impact factor: 14.919

10.  Hip disability and osteoarthritis outcome score (HOOS)--validity and responsiveness in total hip replacement.

Authors:  Anna K Nilsdotter; L Stefan Lohmander; Maria Klässbo; Ewa M Roos
Journal:  BMC Musculoskelet Disord       Date:  2003-05-30       Impact factor: 2.362

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  4 in total

1.  Diagnosing osteoarthritis from T2 maps using deep learning: an analysis of the entire Osteoarthritis Initiative baseline cohort.

Authors:  V Pedoia; J Lee; B Norman; T M Link; S Majumdar
Journal:  Osteoarthritis Cartilage       Date:  2019-03-21       Impact factor: 6.576

2.  Generating dynamical neuroimaging spatiotemporal representations (DyNeuSR) using topological data analysis.

Authors:  Caleb Geniesse; Olaf Sporns; Giovanni Petri; Manish Saggar
Journal:  Netw Neurosci       Date:  2019-07-01

3.  [18 F]-Sodium Fluoride PET/MR Imaging for Bone-Cartilage Interactions in Hip Osteoarthritis: A Feasibility Study.

Authors:  Radhika Tibrewala; Emma Bahroos; Hatef Mehrabian; Sarah C Foreman; Thomas M Link; Valentina Pedoia; Sharmila Majumdar
Journal:  J Orthop Res       Date:  2019-08-30       Impact factor: 3.494

4.  Use of machine learning in osteoarthritis research: a systematic literature review.

Authors:  Encarnita Mariotti-Ferrandiz; Jérémie Sellam; Marie Binvignat; Valentina Pedoia; Atul J Butte; Karine Louati; David Klatzmann; Francis Berenbaum
Journal:  RMD Open       Date:  2022-03
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