Literature DB >> 29720974

Erratum: Addendum: Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).

David W Waite1, Inka Vanwonterghem1, Christian Rinke1, Donovan H Parks1, Ying Zhang2, Ken Takai3, Stefan M Sievert4, Jörg Simon5, Barbara J Campbell6, Thomas E Hanson7,8, Tanja Woyke9, Martin G Klotz10,11, Philip Hugenholtz1.   

Abstract

[This corrects the article on p. 682 in vol. 8, PMID: 28484436.].

Keywords:  Epsilonbacteraeota; Epsilonbacterota; Epsilonproteobacteria; classification; evolution; genome; phylogenomics; taxonomy

Year:  2018        PMID: 29720974      PMCID: PMC5915535          DOI: 10.3389/fmicb.2018.00772

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


In our original publication, we proposed the phylum name Epsilonbacteraeota according to a proposal to modify Rule 8 of the International Code of Nomenclature of Prokaryotes, under which the suffix –aeota would be used to denote prokaryotic phyla (Oren et al., 2015). An addendum to this proposal was recently made whereby the shorter suffix –ota, instead of –aeota, be added to the stem of the name of one of the contained classes (Whitman et al., 2018). In accordance with this amendment, and the requirement that a class name is derived from a type genus (Oren et al., 2015), we propose to replace the name Epsilonbacteraeota with Campylobacterota. This change does not affect subordinate ranks of the phylum. Campylobacterota (Cam.py.lo.bac.ter.o′ta. N.L. neut. n. Campylobacter type genus of the type order of the type class of the phylum; suff. -ota, proposed ending to denote a phylum; N.L. neut. pl. n. Campylobacterota the phylum of the class Campylobacteria).

Conflict of interest statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
  2 in total

1.  Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes.

Authors:  Aharon Oren; Milton S da Costa; George M Garrity; Fred A Rainey; Ramon Rosselló-Móra; Bernhard Schink; Iain Sutcliffe; Martha E Trujillo; William B Whitman
Journal:  Int J Syst Evol Microbiol       Date:  2015-11       Impact factor: 2.747

2.  Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'.

Authors:  William B Whitman; Aharon Oren; Maria Chuvochina; Milton S da Costa; George M Garrity; Fred A Rainey; Ramon Rossello-Mora; Bernhard Schink; Iain Sutcliffe; Martha E Trujillo; Stefano Ventura
Journal:  Int J Syst Evol Microbiol       Date:  2018-01-18       Impact factor: 2.747

  2 in total
  18 in total

1.  Phylogenomics of the Phylum Proteobacteria: Resolving the Complex Relationships.

Authors:  Vaibhav Sharma; Amit Vashishtha; Arsha Liz M Jos; Akshita Khosla; Nirmegh Basu; Rishabh Yadav; Amit Bhatt; Akshanshi Gulani; Pushpa Singh; Sanidhya Lakhera; Mansi Verma
Journal:  Curr Microbiol       Date:  2022-06-15       Impact factor: 2.188

2.  Dominance of Sulfurospirillum in Metagenomes Associated with the Methane Ice Worm (Sirsoe methanicola).

Authors:  Shen Jean Lim; Luke R Thompson; Craig M Young; Terry Gaasterland; Kelly D Goodwin
Journal:  Appl Environ Microbiol       Date:  2022-07-12       Impact factor: 5.005

3.  Niche differentiation of sulfur-oxidizing bacteria (SUP05) in submarine hydrothermal plumes.

Authors:  Bledina Dede; Christian T Hansen; Rene Neuholz; Bernhard Schnetger; Charlotte Kleint; Sharon Walker; Wolfgang Bach; Rudolf Amann; Anke Meyerdierks
Journal:  ISME J       Date:  2022-01-26       Impact factor: 11.217

4.  Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers.

Authors:  Margarita Lopez-Fernandez; Mats Åström; Stefan Bertilsson; Mark Dopson
Journal:  Front Microbiol       Date:  2018-11-27       Impact factor: 5.640

Review 5.  Microbially Mediated Hydrogen Cycling in Deep-Sea Hydrothermal Vents.

Authors:  Nicole Adam; Mirjam Perner
Journal:  Front Microbiol       Date:  2018-11-23       Impact factor: 5.640

6.  Molecular characterization of Bathymodiolus mussels and gill symbionts associated with chemosynthetic habitats from the U.S. Atlantic margin.

Authors:  D Katharine Coykendall; Robert Scott Cornman; Nancy G Prouty; Sandra Brooke; Amanda W J Demopoulos; Cheryl L Morrison
Journal:  PLoS One       Date:  2019-03-14       Impact factor: 3.240

7.  Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities.

Authors:  François Thomas; James T Morris; Cathleen Wigand; Stefan M Sievert
Journal:  PLoS One       Date:  2019-04-29       Impact factor: 3.240

Review 8.  Regulation of Respiratory Pathways in Campylobacterota: A Review.

Authors:  Anne-Xander van der Stel; Marc M S M Wösten
Journal:  Front Microbiol       Date:  2019-07-30       Impact factor: 5.640

9.  Antimicrobial Peptides and Ectosymbiotic Relationships: Involvement of a Novel Type IIa Crustin in the Life Cycle of a Deep-Sea Vent Shrimp.

Authors:  Simon Le Bloa; Céline Boidin-Wichlacz; Valérie Cueff-Gauchard; Rafael Diego Rosa; Virginie Cuvillier-Hot; Lucile Durand; Pierre Methou; Florence Pradillon; Marie-Anne Cambon-Bonavita; Aurélie Tasiemski
Journal:  Front Immunol       Date:  2020-07-13       Impact factor: 7.561

10.  Genomic Characterization of Arcobacter butzleri Isolated From Shellfish: Novel Insight Into Antibiotic Resistance and Virulence Determinants.

Authors:  Francesca Fanelli; Angela Di Pinto; Anna Mottola; Giuseppina Mule; Daniele Chieffi; Federico Baruzzi; Giuseppina Tantillo; Vincenzina Fusco
Journal:  Front Microbiol       Date:  2019-04-16       Impact factor: 5.640

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