Literature DB >> 29717998

In situ proteolysis of an N-terminal His tag with thrombin improves the diffraction quality of human aldo-keto reductase 1C3 crystals.

Jovana J Plavša1, Pavlína Řezáčová2, Michael Kugler2, Petr Pachl2, Jiří Brynda2, Zdeněk Voburka2, Anđelka Ćelić1, Edward T Petri1, Jana Škerlová2.   

Abstract

Human aldo-keto reductase 1C3 (AKR1C3) stereospecifically reduces steroids and prostaglandins and is involved in the biotransformation of xenobiotics. Its role in various cancers makes it a potential therapeutic target for the development of inhibitors. Recombinant AKR1C3 with a thrombin-cleavable N-terminal His6 tag was expressed from a pET-28(+) vector for structural studies of enzyme-inhibitor complexes. A modified in situ proteolysis approach was applied to specifically remove the His tag by thrombin cleavage during crystallization screening trials. This improved the morphology and diffraction quality of the crystals and allowed the acquisition of high-resolution diffraction data and structure solution. This approach may be generally applicable to other proteins expressed using the pET-28(+) vector.

Entities:  

Keywords:  17β-hydroxysteroid dehydrogenase 5; His tags; aldo-keto reductase 1C3; diffraction-quality improvement; in situ proteolysis; pET-28(+)

Mesh:

Substances:

Year:  2018        PMID: 29717998      PMCID: PMC5931143          DOI: 10.1107/S2053230X18005721

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  28 in total

1.  Human 3alpha-hydroxysteroid dehydrogenase isoforms (AKR1C1-AKR1C4) of the aldo-keto reductase superfamily: functional plasticity and tissue distribution reveals roles in the inactivation and formation of male and female sex hormones.

Authors:  T M Penning; M E Burczynski; J M Jez; C F Hung; H K Lin; H Ma; M Moore; N Palackal; K Ratnam
Journal:  Biochem J       Date:  2000-10-01       Impact factor: 3.857

2.  Isoquinoline alkaloids as a novel type of AKR1C3 inhibitors.

Authors:  Lucie Skarydova; Jakub Hofman; Jakub Chlebek; Jana Havrankova; Katerina Kosanova; Adam Skarka; Anna Hostalkova; Tomas Plucha; Lucie Cahlikova; Vladimir Wsol
Journal:  J Steroid Biochem Mol Biol       Date:  2014-04-24       Impact factor: 4.292

3.  Structures of complexes of type 5 17β-hydroxysteroid dehydrogenase with structurally diverse inhibitors: insights into the conformational changes upon inhibitor binding.

Authors:  Yasushi Amano; Tomohiko Yamaguchi; Tatsuya Niimi; Hitoshi Sakashita
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-03-27

4.  Morpholylureas are a new class of potent and selective inhibitors of the type 5 17-β-hydroxysteroid dehydrogenase (AKR1C3).

Authors:  Jack U Flanagan; Graham J Atwell; Daniel M Heinrich; Darby G Brooke; Shevan Silva; Laurent J M Rigoreau; Elisabeth Trivier; Andrew P Turnbull; Tony Raynham; Stephen M F Jamieson; William A Denny
Journal:  Bioorg Med Chem       Date:  2014-01-02       Impact factor: 3.641

5.  Identification of a principal mRNA species for human 3alpha-hydroxysteroid dehydrogenase isoform (AKR1C3) that exhibits high prostaglandin D2 11-ketoreductase activity.

Authors:  K Matsuura; H Shiraishi; A Hara; K Sato; Y Deyashiki; M Ninomiya; S Sakai
Journal:  J Biochem       Date:  1998-11       Impact factor: 3.387

6.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  Crystal structures of prostaglandin D(2) 11-ketoreductase (AKR1C3) in complex with the nonsteroidal anti-inflammatory drugs flufenamic acid and indomethacin.

Authors:  Andrew L Lovering; Jon P Ride; Christopher M Bunce; Julian C Desmond; Stephen M Cummings; Scott A White
Journal:  Cancer Res       Date:  2004-03-01       Impact factor: 12.701

8.  Development of potent and selective indomethacin analogues for the inhibition of AKR1C3 (Type 5 17β-hydroxysteroid dehydrogenase/prostaglandin F synthase) in castrate-resistant prostate cancer.

Authors:  Andy J Liedtke; Adegoke O Adeniji; Mo Chen; Michael C Byrns; Yi Jin; David W Christianson; Lawrence J Marnett; Trevor M Penning
Journal:  J Med Chem       Date:  2013-03-13       Impact factor: 7.446

9.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.