Literature DB >> 29717995

The putative siderophore-interacting protein from Vibrio anguillarum: protein production, analysis, crystallization and X-ray crystallographic studies.

Yu Han1, Kun Zang1, Changshui Liu1, Yingjie Li1, Qingjun Ma1.   

Abstract

Siderophore-interacting proteins (SIPs) play an important role in iron acquisition in many bacteria. SIPs release iron from the internalized ferric siderophore complex by reducing ferric iron to ferrous iron, but how the iron is reduced is not well understood. Here, a sip gene was identified in the genome of Vibrio anguillarum 775. To further understand the catalytic mechanism of the protein, the SIP was overexpressed in Escherichia coli Rosetta (DE3) cells, purified and crystallized for X-ray diffraction analysis. The crystal diffracted to 1.113 Å resolution and belonged to space group P21, with unit-cell parameters a = 64.63, b = 58.47, c = 70.65 Å, β = 114.19°.

Entities:  

Keywords:  Vibrio anguillarum; iron release; siderophore-interacting proteins; siderophores

Mesh:

Substances:

Year:  2018        PMID: 29717995      PMCID: PMC5931140          DOI: 10.1107/S2053230X18005125

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  18 in total

1.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

2.  Preliminary X-ray diffraction analysis of YqjH from Escherichia coli: a putative cytoplasmic ferri-siderophore reductase.

Authors:  Vicki A Bamford; Maria Armour; Sue A Mitchell; Michaël Cartron; Simon C Andrews; Kimberly A Watson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-08-09

3.  Structure and Mechanism of the Siderophore-Interacting Protein from the Fuscachelin Gene Cluster of Thermobifida fusca.

Authors:  Kunhua Li; Wei-Hung Chen; Steven D Bruner
Journal:  Biochemistry       Date:  2015-06-18       Impact factor: 3.162

4.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

5.  Identification, cloning, and sequencing of a gene required for ferric vibriobactin utilization by Vibrio cholerae.

Authors:  J R Butterton; S B Calderwood
Journal:  J Bacteriol       Date:  1994-09       Impact factor: 3.490

6.  Anguibactin- versus vanchrobactin-mediated iron uptake in Vibrio anguillarum: evolution and ecology of a fish pathogen.

Authors:  Manuel L Lemos; Miguel Balado; Carlos R Osorio
Journal:  Environ Microbiol Rep       Date:  2009-12-02       Impact factor: 3.541

7.  The siderophore-interacting protein is involved in iron acquisition and virulence of Riemerella anatipestifer strain CH3.

Authors:  Jing Tu; Fengying Lu; Shuang Miao; Xintao Ni; Pan Jiang; Hui Yu; Linlin Xing; Shengqing Yu; Chan Ding; Qinghai Hu
Journal:  Vet Microbiol       Date:  2013-11-28       Impact factor: 3.293

8.  Data processing and analysis with the autoPROC toolbox.

Authors:  Clemens Vonrhein; Claus Flensburg; Peter Keller; Andrew Sharff; Oliver Smart; Wlodek Paciorek; Thomas Womack; Gérard Bricogne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

Review 10.  Iron Acquisition Strategies of Vibrio anguillarum.

Authors:  Yingjie Li; Qingjun Ma
Journal:  Front Cell Infect Microbiol       Date:  2017-07-25       Impact factor: 5.293

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  1 in total

1.  Structural and Biochemical Characterization of the Flavin-Dependent Siderophore-Interacting Protein from Acinetobacter baumannii.

Authors:  Hannah Valentino; David A Korasick; Tabbetha J Bohac; Justin A Shapiro; Timothy A Wencewicz; John J Tanner; Pablo Sobrado
Journal:  ACS Omega       Date:  2021-07-06
  1 in total

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