Literature DB >> 29714684

SET-9 and SET-26 are H3K4me3 readers and play critical roles in germline development and longevity.

Wenke Wang1, Amaresh Chaturbedi1, Minghui Wang2, Serim An1, Satheeja Santhi Velayudhan1, Siu Sylvia Lee1.   

Abstract

C. elegans SET-9 and SET-26 are highly homologous paralogs that share redundant functions in germline development, but SET-26 alone plays a key role in longevity and heat stress response. Whereas SET-26 is broadly expressed, SET-9 is only detectable in the germline, which likely accounts for their different biological roles. SET-9 and SET-26 bind to H3K4me3 with adjacent acetylation marks in vitro and in vivo. In the soma, SET-26 acts through DAF-16 to modulate longevity. In the germline, SET-9 and SET-26 restrict H3K4me3 domains around SET-9 and SET-26 binding sites, and regulate the expression of specific target genes, with critical consequence on germline development. SET-9 and SET-26 are highly conserved and our findings provide new insights into the functions of these H3K4me3 readers in germline development and longevity.
© 2018, Wang et al.

Entities:  

Keywords:  C. elegans; H3K4me3; chromosomes; developmental biology; gene expression; germline; longevity; regenerative medicine; stem cells

Mesh:

Substances:

Year:  2018        PMID: 29714684      PMCID: PMC6010342          DOI: 10.7554/eLife.34970

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  44 in total

1.  Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing.

Authors:  Robert J Sims; Scott Millhouse; Chi-Fu Chen; Brian A Lewis; Hediye Erdjument-Bromage; Paul Tempst; James L Manley; Danny Reinberg
Journal:  Mol Cell       Date:  2007-11-30       Impact factor: 17.970

Review 2.  MLL5 (KMT2E): structure, function, and clinical relevance.

Authors:  Xiaoming Zhang; Wisna Novera; Yan Zhang; Lih-Wen Deng
Journal:  Cell Mol Life Sci       Date:  2017-02-10       Impact factor: 9.261

3.  Setd5 is essential for mammalian development and the co-transcriptional regulation of histone acetylation.

Authors:  Anna B Osipovich; Rama Gangula; Pedro G Vianna; Mark A Magnuson
Journal:  Development       Date:  2016-11-18       Impact factor: 6.868

4.  Genome-wide germline-enriched and sex-biased expression profiles in Caenorhabditis elegans.

Authors:  Valerie Reinke; Inigo San Gil; Samuel Ward; Keith Kazmer
Journal:  Development       Date:  2003-12-10       Impact factor: 6.868

5.  MLL5, a trithorax homolog, indirectly regulates H3K4 methylation, represses cyclin A2 expression, and promotes myogenic differentiation.

Authors:  Soji Sebastian; Prethish Sreenivas; Ramkumar Sambasivan; Sirisha Cheedipudi; Prashanth Kandalla; Grace K Pavlath; Jyotsna Dhawan
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-05       Impact factor: 11.205

6.  UpSET recruits HDAC complexes and restricts chromatin accessibility and acetylation at promoter regions.

Authors:  Hector Rincon-Arano; Jessica Halow; Jeffrey J Delrow; Susan M Parkhurst; Mark Groudine
Journal:  Cell       Date:  2012-11-21       Impact factor: 41.582

Review 7.  The SET-domain protein superfamily: protein lysine methyltransferases.

Authors:  Shane C Dillon; Xing Zhang; Raymond C Trievel; Xiaodong Cheng
Journal:  Genome Biol       Date:  2005-08-02       Impact factor: 13.583

8.  Dauer-independent insulin/IGF-1-signalling implicates collagen remodelling in longevity.

Authors:  Collin Y Ewald; Jess N Landis; Jess Porter Abate; Coleen T Murphy; T Keith Blackwell
Journal:  Nature       Date:  2014-12-15       Impact factor: 49.962

9.  Trimethylation of Lys36 on H3 restricts gene expression change during aging and impacts life span.

Authors:  Mintie Pu; Zhuoyu Ni; Minghui Wang; Xiujuan Wang; Jason G Wood; Stephen L Helfand; Haiyuan Yu; Siu Sylvia Lee
Journal:  Genes Dev       Date:  2015-04-01       Impact factor: 11.361

10.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

View more
  5 in total

1.  Serotonin signaling by maternal neurons upon stress ensures progeny survival.

Authors:  Srijit Das; Felicia K Ooi; Johnny Cruz Corchado; Leah C Fuller; Joshua A Weiner; Veena Prahlad
Journal:  Elife       Date:  2020-04-23       Impact factor: 8.140

2.  CUT&RUN for Chromatin Profiling in Caenorhabditis elegans.

Authors:  Felicity J Emerson; Siu Sylvia Lee
Journal:  Curr Protoc       Date:  2022-06

3.  Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres.

Authors:  Yogita Jethmalani; Khoa Tran; Maraki Y Negesse; Winny Sun; Mark Ramos; Deepika Jaiswal; Meagan Jezek; Shandon Amos; Eric Joshua Garcia; DoHwan Park; Erin M Green
Journal:  Life Sci Alliance       Date:  2021-10-08

4.  Cold Survival and Its Molecular Mechanisms in a Locally Adapted Nematode Population.

Authors:  Wenke Wang; Anna G Flury; Jennifer L Garrison; Rachel B Brem
Journal:  Genome Biol Evol       Date:  2021-09-01       Impact factor: 3.416

5.  SETDB1-like MET-2 promotes transcriptional silencing and development independently of its H3K9me-associated catalytic activity.

Authors:  Colin E Delaney; Stephen P Methot; Veronique Kalck; Jan Seebacher; Daniel Hess; Susan M Gasser; Jan Padeken
Journal:  Nat Struct Mol Biol       Date:  2022-01-31       Impact factor: 18.361

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.