| Literature DB >> 29713527 |
Alex Sander Rodrigues Cangussu1, Deborah Aires Almeida1, Raimundo Wagner de Souza Aguiar1, Sidnei Emilio Bordignon-Junior2, Kelvinson Fernandes Viana3, Luiz Carlos Bertucci Barbosa4, Edson Wagner da Silva Cangussu5, Igor Viana Brandi6, Augustus Caeser Franke Portella1, Gil Rodrigues Dos Santos1, Eliane Macedo Sobrinho7, William James Nogueira Lima6.
Abstract
Phytase plays a prominent role in monogastric animal nutrition due to its ability to improveEntities:
Year: 2018 PMID: 29713527 PMCID: PMC5866894 DOI: 10.1155/2018/8240698
Source DB: PubMed Journal: Enzyme Res ISSN: 2090-0414
Figure 1Molecular structures. The phytic acid (a) and mechanism of enzyme action (b) developed by ChemBioDraw Ultra version 12 software.
Figure 2Structural model of purple acid phosphatase from barley (Hordeum vulgare) proposed by Dionisio et al. [4]. PAPhy genes are grouped in isogenes HvPAPhy_a, HvPAPhy_b1, and HvPAPhy_b2. Isogenes HvPAPhy possess significant phytase activity in the mature grains and proteins already were produced in P. pastoris. Structural model used i-TASSER server for protein structure and function prediction (https://zhanglab.ccmb.med.umich.edu/I-TASSER/) [105]. FASTA sequences were obtained from https://www.ncbi.nlm.nih.gov/protein. Isoform a is constituted by 544 amino acids, 60,29 kDa, and Hphob of 49,5%. The ligand-binding site residues from isoform a are represented by amino acid sequence 199, 226, 283, 365, and 402. Isoform b1 is constituted by 536 amino acids and 59,51 kDa with the ligand-binding site residues being represented by amino acid sequence 194, 221, 278, 359, and 396. Isoform b2 is constituted by 537 amino acids and 59,34 kDa. Ligand-binding site residues are constituted by amino acid sequence 194, 221, 278, 360, and 397.
Major genes evaluated in transgenic plants and microorganisms with phytase activity.
| Gene | Plant target | Microbial target | Reference |
|---|---|---|---|
| HvPAPhy_a |
| — | Holme et al. [ |
| PHY_US417 |
| — | Belgaroui et al. [ |
| PHYA |
| — | Mohsin et al. [ |
| AVP1DOX |
| — | Yang et al. [ |
| MtPHY1 |
| — | Ma et al. [ |
| MtPT1 |
| — | Ma et al. [ |
| HvPAPhya | — |
| Dionisio et al. [ |
| HvPAPhyb1 | — |
| Dionisio et al. [ |
| HvPAPhyb2 | — |
| Dionisio et al. [ |
|
| — |
| Xiong et al. [ |
Figure 3Structural model of Aspergillus niger phytase proposed by Mishra et al. [50] available at https://www.ncbi.nlm.nih.gov/protein and i-TASSER server used for protein structure and function prediction (https://zhanglab.ccmb.med.umich.edu/I-TASSER/) [105]. The domains are identified in the secondary structure elements being alpha-helices (1) and the secondary structure (2).
Figure 4Structural model of Xanthomonas oryzae phytase proposed by Wilkins et al. [53] available at https://www.ncbi.nlm.nih.gov/protein and i-TASSER server used for protein structure and function prediction (https://zhanglab.ccmb.med.umich.edu/I-TASSER/) [105]. The domains are identified in the secondary structure elements being alpha-helices (1) and the secondary structure (2).
Figure 5Structural model of Wickerhamomyces anomalus phytase proposed by Kaur et al. [54] available at https://www.ncbi.nlm.nih.gov/protein and i-TASSER server used for protein structure and function prediction (https://zhanglab.ccmb.med.umich.edu/I-TASSER/) [105]. The domains are identified in the secondary structure elements being alpha-helices (1) and the secondary structure (2).
Figure 6Secondary structure assignment of microbial phytase by Hydrophobicity Clusters Analysis (HCA) proposed by Bertrand et al. [57]. FASTA data proposed by Kaur et al. [54] are available at https://www.ncbi.nlm.nih.gov/protein. Hydrophobic amino acids are not distributed randomly but form clusters. The clusters are correspondent for the real positions in the regular secondary structures. Vertical clusters are often associated with beta strands and horizontal clusters correspond to alpha-helices. Xanthomonas oryzae, Hphob = 51,7%, and Wickerhamomyces anomalus, Hphob = 48,1%.
Figure 7Secondary structure assignment of phytase from Aspergillus niger and Hordeum vulgare L. by Hydrophobicity Clusters Analysis (HCA) proposed by Bertrand et al. [57]. FASTA data proposed by Mishra et al. [50] and Dionisio et al. [4] are available at https://www.ncbi.nlm.nih.gov/protein. Hydrophobic amino acids are not distributed randomly but form clusters. The clusters are correspondent for the real positions in the regular secondary structures. Vertical clusters are often associated with beta strands and horizontal clusters correspond to alpha-helices. Aspergillus niger, Hphob = 44,8%, and Hordeum vulgare L. isoform a, Hphob = 49,5%.
Microbial phytase obtained by submerged and solid-state fermentation.
| Microorganisms | Process | Yield | Reference |
|---|---|---|---|
|
| SSF | 154.0 U·l−1 | Bhavsar et al. [ |
|
| SF | 7.4–12.4 U·ml−1 | Costa et al. [ |
|
| SSF | 55.5 U·ml−1 | Salmon et al. [ |
|
| SF | 8.5–9.0 U·mg−1 | Fu et al. [ |
|
| SF | 2.957 U·ml−1 | Fu et al. [ |
|
| SF | 12.86 and 20.75 U·ml−1 | Martin et al. [ |
|
| |||
|
| SF | 13.5 g l−1 | Mayer et al. [ |
SSF: solid-state fermentation; SF: submerged fermentation; U ml−1: units per milliliter; U mg−1: units per milligram; g l−1: gram per liter.