| Literature DB >> 29713519 |
S V Kovnir1, N A Orlova1, M I Shakhparonov2, K G Skryabin1, A G Gabibov2, I I Vorobiev1,2.
Abstract
Hemophilia B patients suffer from an inherited blood-clotting defect and require regular administration of blood-clotting factor IX replacement therapy. Recombinant human factor IX produced in cultured CHO cells is nearly identical to natural, plasma-derived factor IX and is widely used in clinical practice. Development of a biosimilar recombinant human factor IX for medical applications requires the generation of a clonal cell line with the highest specific productivity possible and a high level of specific procoagulant activity of the secreted factor IX. We previously developed plasmid vectors, p1.1 and p1.2, based on the untranslated regions of the translation elongation factor 1 alpha gene from Chinese hamster. These vectors allow one to perform the methotrexate- driven amplification of the genome-integrated target genes and co-transfect auxiliary genes linked to various resistance markers. The natural open reading frame region of the factor IX gene was cloned in the p1.1 vector plasmid and transfected to CHO DG44 cells. Three consecutive amplification rounds and subsequent cell cloning yielded a producer cell line with a specific productivity of 10.7 ± 0.4 pg/cell/day. The procoagulant activity of the secreted factor IX was restored nearly completely by co-transfection of the producer cells by p1.2 plasmids bearing genes of the soluble truncated variant of human PACE/furin signal protease and vitamin K oxidoreductase from Chinese hamster. The resulting clonal cell line 3B12-86 was able to secrete factor IX in a protein-free medium up to a 6 IU/ml titer under plain batch culturing conditions. The copy number of the genome- integrated factor IX gene for the 3B12-86 cell line was only 20 copies/genome; the copy numbers of the genome-integrated genes of PACE/furin and vitamin K oxidoreductase were 3 and 2 copies/genome, respectively. Factor IX protein secreted by the 3B12-86 cell line was purified by three consecutive chromatography rounds to a specific activity of up to 230 IU/mg, with the overall yield > 30%. The developed clonal producer cell line and the purification process employed in this work allow for economically sound industrial-scale production of biosimilar factor IX for hemophilia B therapy.Entities:
Keywords: blood clotting factor IX; hemophilia B; heterologous protein expression system
Year: 2018 PMID: 29713519 PMCID: PMC5916734
Source DB: PubMed Journal: Acta Naturae ISSN: 2075-8251 Impact factor: 1.845
Fig. 1Maps of the expression plasmids p1.1-F9, p1.2-Zeo-VKORC, and p1.2-Hyg-Fur. pCHO EEF1A – functional promoter of the gene of Chinese hamster translation elongation factor 1 alpha, the 5’ untranslated region of this gene and nontranscribing DNA regions flanking this gene; IRES – internal ribosome binding site of the EMCV; DHFR – the open reading frame of the mouse DHFR gene used for selection and genome amplification in eukaryotic cells; tCHO EEF1A – polyadenylation signal, the transcription terminator of the Chinese hamster translation elongation factor 1 alpha gene and the corresponding 3’ nontranscribing DNA region flanking the aforesaid gene; FIX – open reading frame of the human blood clotting factor IX; VKORC – open reading frame of the Chinese hamster VKORC1 gene; SV40 prom – immediate early promoter of the SV40 virus; SV40t pA – transcription terminator and polyadenylation sequence of the SV40 virus; Zeo – open reading frame of the Sh ble gene (Streptoalloteichus hindustanus bleomycin) conferring zeocin resistance; Furin – open reading frame of the human PACE/furin protease gene; Hygro – open reading frame of the hygromycin phosphotransferase gene (E.coli hpt). Promoter directions are depicted by arrows
Fig. 2The integrity of the intracellular and extracellular FIX polypeptide chain for the p1.1-F9-T2/S cell line, FIX secretion level and the change in clotting activity for various producer cell lines; the phylogenetic tree for the Chinese hamster VKORC1 protein. Panel A – Western blotting of the secreted and intracellular FIX. SDS-PAGE under reducing conditions, detection by polyclonal anti-FIX antibodies, the molecular weight of the marker bands is shown in kDa. Denotation: “K+” – recombinant FIX standard; “control-” – untransfected CHO DG44 cells. The mature FIX position is depicted by an arrow. Panel B – FIX secretion level and the degree of propeptide processing for cell populations and clonal lines. ELISA-determined specific productivity is shown as bars (left axis). Specific productivity as the clotting activity is shown as a broken line (right axis). The percentage of FIX molecules without the propeptide was determined by ELISA and is shown as numbers above the bars. Specific productivity for both methods is shown as the mean value; error bars represent the standard deviation, n=2. The scheme of production of cell populations and clonal lines is shown with arrows. Panel C – The taxonomic tree for a mammalian VKORC1 protein visualized using the Tree Viewer software (NCBI, USA). The scale bar represents the evolutionary distance measured as the number of substitutions per amino acid residue. Panel D – multiple alignment of the amino acid sequences of VKORC1 variants for the selected mammalian species. Conservative amino acid residues are shown against a black background
The primers used to clone and sequence the expression plasmids
| Primer | Nucleotide sequence 5’ → 3’ |
|---|---|
| FIX | |
| AD-9-AbsF | ttcctcgaggccgccaccatgcagcgcgtgaacatg |
| AD-9-NheR | atgctagctttcattaagtgagctttg |
| 9SQf | cggtatgtcaactggattaag |
| 9-AS | ctgctggttcacaggactt |
| VKORC1 | |
| vkof1 | gtcgacatgggcaccacctgag |
| vkof2 | gacatgggca ccacctggag gagccc |
| vkor1 | ctcagggccttttggccttgtgttc |
| AD-CVKO-AbsIF | ttcctcgaggccgccaccatgggcaccacctgg |
| AD-CVKO-AbsIF | atgctagctcagggcctttt ggcct |
| AD-hVKO-AbsIF | ttcctcgaggccgccaccatgggcagcacctggggga |
| AD-hVKO-NheIR | atgctagctcagtgcctcttagccttg |
| Furin | |
| AD-FUR-AbsF | ttcctcgaggccgccaccatggagctgaggccctg |
| AD-FUR-NheR | aatctagactatcactcaggcaggtgtgagggc |
| IP-fVQ-F | gctgcagagggagcctcaagtacagtggctggaacagcaggtg |
| IP-fVQ-R | cacctgctgttccagccactgtacttgaggctccctctgcagc |
| SQ-FUR639-F | caacggtgtctgtggtgtagg |
| SQ-FUR1228-F | gcccacctcaatgccaacg |
| SQ-FUR1563-R | cagggtggagcgggtg |
| SQ-fVQ-R | gttccagccactgtacttg |
| Primers targeting the vectors | |
| T7prom | taatacgactcactataggg |
| SP6 | gatttaggtgacactatag |
| 3CH1-Rev | acaaacagttctgagaccg |
| SQ-5CH6-F | gccgctgcttcctgtgac |
| IRESArev | aggtttccgggccctcacattg |
Specific real-time PCR primers
| Primer | Nucleotide sequence 5’ → 3’ |
|---|---|
| RT-F9-F | ttagatgtaacatgtaacattaagaatggcag |
| RT-F9-R | cattaaatgattgggtgctttgag |
| RT-ID-F | gccacaagatctgccaccatg |
| RT-ID-R | gtaggtctccgttcttgccaatc |
| RT-HYG-F | ttcggctccaacaatgtc |
| RT-HYG-R | gtctgctgctccatacaag |
| RT-Zeo-F | agttgaccagtgccgttcc |
| RT-Zeo-R | ggcgaagtcgtcctccac |
| RT-FURC-F | agcgggacctgaatgtgaag |
| RT-FURC-R | ggtggttcttctcgatgcca |
| RT-PPIB-F | gcaggcaaagacaccaatg |
| RT-PPIB-R | ctccaccttcctcactacatc |
| RT-bACT-F | gctcttttccagccttcctt |
| RT-bACT-R | gagccagagcagtgatctcc |
| RT-cVKOspN-F | aacgggtttgccgtcagaac |
| RT-cVKOspN-R | cggtaatcctcgtctcgg |
| RT-cVKOspC-F | gggcttgatgttgcttaatttc |
| RT-cVKOspC-R | gcaggtgttaggggtaatatg |
The VKORC1 activity level in stably transfected cells
| Plasmid |
Specific VKORC1 |
The relative |
|---|---|---|
| Intact CHO DG44 cells | 0.38 | - |
| p1.2-Zeo-VKORC1 | 9.21 | 24.2 |
| p1.2-Zeo-hVKORC1 | 3.03 | 8.0 |
Note: specific activities were calculated for the linear regions of the curve showing substrate conversion versus total protein concentration in lysates.
FIX purification
| Fraction name | FIX:Ag, IU/ml | Fraction volume, ml | FIX:C, IU/ml | FIX:Ag, IU |
Total protein quantified by UV | FIX:C, IU | FIX:C/ protein, IU/mg | FIX:Ag/ /protein, IU/mg |
Yield of the stage with |
Overall yield with |
Percentage of FIX with |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Culture medium | 6.04 | 115 | 3.6 | 695 | - | 414 | - | - | - | - | 2,6 |
| Capto MMC flow-through and eluate fractions | 0.166 | 273 | - | 45 | - | - | - | - | 7% | - | - |
| Capto MMC eluate | 64.79 | 9 | - | 583 | 4.28 | - | - | 136 | 84% | 84% | - |
| Capto Q flow-through fraction | 0.07 | 37 | - | 3 | 0.69 | - | - | 4 | 0.4% | - | - |
| Capto Q eluate 200 mM NaCl | 0.05 | 12.5 | - | 1 | 0.48 | - | - | - | - | - | |
| Capto Q eluate 10 mM CaCl2 | 31.75 | 9.2 | 25.2 | 292 | 1.51 | 232 | 154 | 194 | 50% | 62% | 2 |
| Capto Q, 150 mM NaCl + 10 mM CaCl2 | 12.95 | 10.5 | - | 136 | 0.88 | - | - | 154 | 23% | ||
| Capto Q 200 mM NaCl + 10 mM CaCl2 | 4.67 | 10.7 | <1 | 50 | 0.83 | <10.7 | <12 | 60 | 9% | - | 5.8 |
| Capto Q 500 mM NaCl + 10 mM CaCl2 | 13.87 | 4 | - | 55 | 0.57 | - | - | 98 | 10% | - | - |
| Capto Heparin flow-through fraction | 0.72 | 18 | - | 13 | - | - | - | - | 3% | - | - |
| Capto Heparin eluate | 36.10 | 9 | 38.6 | 325 | 1.46 | 347 | 237 | 222 | 76% | 32% | <2 |