Literature DB >> 29708331

Effects of the 1- N-(4-Amino-2 S-hydroxybutyryl) and 6'- N-(2-Hydroxyethyl) Substituents on Ribosomal Selectivity, Cochleotoxicity, and Antibacterial Activity in the Sisomicin Class of Aminoglycoside Antibiotics.

Amr Sonousi1, Vikram A Sarpe1, Margarita Brilkova2, Jochen Schacht3, Andrea Vasella4, Erik C Böttger2, David Crich1.   

Abstract

Syntheses of the 6'- N-(2-hydroxyethyl) and 1- N-(4-amino-2 S-hydroxybutyryl) derivatives of the 4,6-aminoglycoside sisomicin and that of the doubly modified 1- N-(4-amino-2 S-hydroxybutyryl)-6'- N-(2-hydroxyethyl) derivative known as plazomicin are reported together with their antibacterial and antiribosomal activities and selectivities. The 6'- N-(2-hydroxyethyl) modification results in a moderate increase in prokaryotic/eukaryotic ribosomal selectivity, whereas the 1- N-(4-amino-2 S-hydroxybutyryl) modification has the opposite effect. When combined in plazomicin, the effects of the two groups on ribosomal selectivity cancel each other out, leading to the prediction that plazomicin will exhibit ototoxicity comparable to those of the parent and the current clinical aminoglycoside antibiotics gentamicin and tobramycin, as borne out by ex vivo studies with mouse cochlear explants. The 6'- N-(2-hydroxyethyl) modification restores antibacterial activity in the presence of the AAC(6') aminoglycoside-modifying enzymes, while the 1- N-(4-amino-2 S-hydroxybutyryl) modification overcomes resistance to the AAC(2') class but is still affected to some extent by the AAC(3) class. Neither modification is able to circumvent the ArmA ribosomal methyltransferase-induced aminoglycoside resistance. The use of phenyltriazenyl protection for the secondary amino group of sisomicin facilitates the synthesis of each derivative and their characterization through the provision of sharp NMR spectra for all intermediates.

Entities:  

Keywords:  aminoglycoside-modifying enzymes; aminoglycosides; cell-free translation assays; ribosomal methyltransferases; structure−activity relationship

Mesh:

Substances:

Year:  2018        PMID: 29708331      PMCID: PMC6045441          DOI: 10.1021/acsinfecdis.8b00052

Source DB:  PubMed          Journal:  ACS Infect Dis        ISSN: 2373-8227            Impact factor:   5.084


  47 in total

1.  Selective Protection of Secondary Amines as the N-Phenyltriazenes. Application to Aminoglycoside Antibiotics.

Authors:  Amr Sonousi; David Crich
Journal:  Org Lett       Date:  2015-08-04       Impact factor: 6.005

2.  N6', N6''', and O4' Modifications to Neomycin Affect Ribosomal Selectivity without Compromising Antibacterial Activity.

Authors:  Girish C Sati; Dimitri Shcherbakov; Sven N Hobbie; Andrea Vasella; Erik C Böttger; David Crich
Journal:  ACS Infect Dis       Date:  2017-04-06       Impact factor: 5.084

3.  Endless Resistance. Endless Antibiotics?

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  Medchemcomm       Date:  2015-11-03       Impact factor: 3.597

4.  Evaluation of apramycin activity against carbapenem-resistant and -susceptible strains of Enterobacteriaceae.

Authors:  Kenneth P Smith; James E Kirby
Journal:  Diagn Microbiol Infect Dis       Date:  2016-09-08       Impact factor: 2.803

Review 5.  Structures and syntheses of aminoglycoside antibiotics.

Authors:  S Umezawa
Journal:  Adv Carbohydr Chem Biochem       Date:  1974       Impact factor: 12.200

6.  Mechanisms of Resistance to Aminoglycoside Antibiotics: Overview and Perspectives.

Authors:  Sylvie Garneau-Tsodikova; Kristin J Labby
Journal:  Medchemcomm       Date:  2015-09-21       Impact factor: 3.597

7.  Influence of 4'-O-Glycoside Constitution and Configuration on Ribosomal Selectivity of Paromomycin.

Authors:  Takahiko Matsushita; Weiwei Chen; Reda Juskeviciene; Youjin Teo; Dimitri Shcherbakov; Andrea Vasella; Erik C Böttger; David Crich
Journal:  J Am Chem Soc       Date:  2015-06-12       Impact factor: 15.419

8.  Dissociation of antibacterial activity and aminoglycoside ototoxicity in the 4-monosubstituted 2-deoxystreptamine apramycin.

Authors:  Tanja Matt; Chyan Leong Ng; Kathrin Lang; Su-Hua Sha; Rashid Akbergenov; Dmitri Shcherbakov; Martin Meyer; Stefan Duscha; Jing Xie; Srinivas R Dubbaka; Déborah Perez-Fernandez; Andrea Vasella; V Ramakrishnan; Jochen Schacht; Erik C Böttger
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-14       Impact factor: 11.205

9.  Structural basis for the inhibition of the eukaryotic ribosome.

Authors:  Nicolas Garreau de Loubresse; Irina Prokhorova; Wolf Holtkamp; Marina V Rodnina; Gulnara Yusupova; Marat Yusupov
Journal:  Nature       Date:  2014-09-10       Impact factor: 49.962

Review 10.  Overcoming Aminoglycoside Enzymatic Resistance: Design of Novel Antibiotics and Inhibitors.

Authors:  Sandra G Zárate; M Luisa De la Cruz Claure; Raúl Benito-Arenas; Julia Revuelta; Andrés G Santana; Agatha Bastida
Journal:  Molecules       Date:  2018-01-30       Impact factor: 4.411

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  11 in total

1.  Design, Multigram Synthesis, and in Vitro and in Vivo Evaluation of Propylamycin: A Semisynthetic 4,5-Deoxystreptamine Class Aminoglycoside for the Treatment of Drug-Resistant Enterobacteriaceae and Other Gram-Negative Pathogens.

Authors:  Takahiko Matsushita; Girish C Sati; Nuwan Kondasinghe; Michael G Pirrone; Takayuki Kato; Prabuddha Waduge; Harshitha Santhosh Kumar; Adrian Cortes Sanchon; Malgorzata Dobosz-Bartoszek; Dimitri Shcherbakov; Mario Juhas; Sven N Hobbie; Thomas Schrepfer; Christine S Chow; Yury S Polikanov; Jochen Schacht; Andrea Vasella; Erik C Böttger; David Crich
Journal:  J Am Chem Soc       Date:  2019-03-13       Impact factor: 15.419

2.  Synthesis, ribosomal selectivity, and antibacterial activity of netilmicin 4'-derivatives.

Authors:  Amr Sonousi; Dimitri Shcherbakov; Andrea Vasella; Erik C Böttger; David Crich
Journal:  Medchemcomm       Date:  2019-04-25       Impact factor: 3.597

3.  Synthesis of saccharocin from apramycin and evaluation of its ribosomal selectivity.

Authors:  Vikram A Sarpe; Michael G Pirrone; Klara Haldimann; Sven N Hobbie; Andrea Vasella; David Crich
Journal:  Medchemcomm       Date:  2019-03-13       Impact factor: 3.597

4.  Apralogs: Apramycin 5-O-Glycosides and Ethers with Improved Antibacterial Activity and Ribosomal Selectivity and Reduced Susceptibility to the Aminoacyltranserferase (3)-IV Resistance Determinant.

Authors:  Jonathan C K Quirke; Parasuraman Rajasekaran; Vikram A Sarpe; Amr Sonousi; Ivan Osinnii; Marina Gysin; Klara Haldimann; Qiao-Jun Fang; Dimitri Shcherbakov; Sven N Hobbie; Su-Hua Sha; Jochen Schacht; Andrea Vasella; Erik C Böttger; David Crich
Journal:  J Am Chem Soc       Date:  2019-12-17       Impact factor: 15.419

5.  Functionally critical residues in the aminoglycoside resistance-associated methyltransferase RmtC play distinct roles in 30S substrate recognition.

Authors:  Meisam Nosrati; Debayan Dey; Atousa Mehrani; Sarah E Strassler; Natalia Zelinskaya; Eric D Hoffer; Scott M Stagg; Christine M Dunham; Graeme L Conn
Journal:  J Biol Chem       Date:  2019-10-08       Impact factor: 5.486

6.  Modification at the 2'-Position of the 4,5-Series of 2-Deoxystreptamine Aminoglycoside Antibiotics To Resist Aminoglycoside Modifying Enzymes and Increase Ribosomal Target Selectivity.

Authors:  Girish C Sati; Vikram A Sarpe; Takayuki Furukawa; Sujit Mondal; Matilde Mantovani; Sven N Hobbie; Andrea Vasella; Erik C Böttger; David Crich
Journal:  ACS Infect Dis       Date:  2019-09-13       Impact factor: 5.084

7.  Selective Modification of Streptozotocin at the C3 Position to Improve Its Bioactivity as Antibiotic and Reduce Its Cytotoxicity towards Insulin-Producing β Cells.

Authors:  Ji Zhang; Liubov Yakovlieva; Bart J de Haan; Paul de Vos; Adriaan J Minnaard; Martin D Witte; Marthe T C Walvoort
Journal:  Antibiotics (Basel)       Date:  2020-04-15

8.  An Advanced Apralog with Increased in vitro and in vivo Activity toward Gram-negative Pathogens and Reduced ex vivo Cochleotoxicity.

Authors:  Amr Sonousi; Jonathan C K Quirke; Prabuddha Waduge; Tanja Janusic; Marina Gysin; Klara Haldimann; Shan Xu; Sven N Hobbie; Su-Hua Sha; Jochen Schacht; Christine S Chow; Andrea Vasella; Erik C Böttger; David Crich
Journal:  ChemMedChem       Date:  2020-10-23       Impact factor: 3.466

9.  Structural basis for plazomicin antibiotic action and resistance.

Authors:  Tolou Golkar; Angelia V Bassenden; Krishnagopal Maiti; Dev P Arya; T Martin Schmeing; Albert M Berghuis
Journal:  Commun Biol       Date:  2021-06-11

10.  Synthesis and Antibacterial Activity of Propylamycin Derivatives Functionalized at the 5''- and Other Positions with a View to Overcoming Resistance Due to Aminoglycoside Modifying Enzymes.

Authors:  Dimitrijs Lubriks; Rimants Zogota; Vikram A Sarpe; Takahiko Matsushita; Girish C Sati; Klara Haldimann; Marina Gysin; Erik C Böttger; Andrea Vasella; Edgars Suna; Sven N Hobbie; David Crich
Journal:  ACS Infect Dis       Date:  2021-06-11       Impact factor: 5.578

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