Literature DB >> 29704626

Understanding dengue virus evolution to support epidemic surveillance and counter-measure development.

S Pollett1, M C Melendrez2, I Maljkovic Berry2, S Duchêne3, H Salje4, D A T Cummings5, R G Jarman2.   

Abstract

Dengue virus (DENV) causes a profound burden of morbidity and mortality, and its global burden is rising due to the co-circulation of four divergent DENV serotypes in the ecological context of globalization, travel, climate change, urbanization, and expansion of the geographic range of the Ae.aegypti and Ae.albopictus vectors. Understanding DENV evolution offers valuable opportunities to enhance surveillance and response to DENV epidemics via advances in RNA virus sequencing, bioinformatics, phylogenetic and other computational biology methods. Here we provide a scoping overview of the evolution and molecular epidemiology of DENV and the range of ways that evolutionary analyses can be applied as a public health tool against this arboviral pathogen.
Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Dengue virus; Evolution; Molecular epidemiology; Phylogenetics

Mesh:

Year:  2018        PMID: 29704626      PMCID: PMC6396301          DOI: 10.1016/j.meegid.2018.04.032

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  19 in total

1.  Variability in Susceptibility to Type I Interferon Response and Subgenomic RNA Accumulation Between Clinical Isolates of Dengue and Zika Virus From Oaxaca Mexico Correlate With Replication Efficiency in Human Cells and Disease Severity.

Authors:  Tannya Karen Castro-Jiménez; Laura Cristina Gómez-Legorreta; Laura Alejandra López-Campa; Valeria Martínez-Torres; Marcos Alvarado-Silva; Araceli Posadas-Mondragón; Nallely Díaz-Lima; Hilda Arcelia Angulo-Mendez; Nancy R Mejía-Domínguez; Felipe Vaca-Paniagua; Federico Ávila-Moreno; Julio García-Cordero; Leticia Cedillo-Barrón; Sergio Roberto Aguilar-Ruíz; José Bustos-Arriaga
Journal:  Front Cell Infect Microbiol       Date:  2022-06-21       Impact factor: 6.073

2.  Implications of a highly divergent dengue virus strain for cross-neutralization, protection, and vaccine immunity.

Authors:  Rita E Chen; Brittany K Smith; John M Errico; David N Gordon; Emma S Winkler; Laura A VanBlargan; Chandni Desai; Scott A Handley; Kimberly A Dowd; Emerito Amaro-Carambot; M Jane Cardosa; Carlos A Sariol; Esper G Kallas; Rafick-Pierre Sékaly; Nikos Vasilakis; Daved H Fremont; Stephen S Whitehead; Theodore C Pierson; Michael S Diamond
Journal:  Cell Host Microbe       Date:  2021-10-04       Impact factor: 31.316

3.  Discriminating arboviral species.

Authors:  Yiyuan Li; Angela C O'Donnell; Howard Ochman
Journal:  J Gen Virol       Date:  2021-04       Impact factor: 3.891

4.  Emergence of genotype Cosmopolitan of dengue virus type 2 and genotype III of dengue virus type 3 in Thailand.

Authors:  Juthamas Phadungsombat; Marco Yung-Cheng Lin; Narinee Srimark; Atsushi Yamanaka; Emi E Nakayama; Visal Moolasart; Patama Suttha; Tatsuo Shioda; Sumonmal Uttayamakul
Journal:  PLoS One       Date:  2018-11-12       Impact factor: 3.240

Review 5.  Recent advances in understanding dengue.

Authors:  Scott Halstead
Journal:  F1000Res       Date:  2019-07-31

6.  Molecular epidemiology of dengue fever outbreaks in Bhutan, 2016-2017.

Authors:  Sangay Zangmo; Jit Bdr Darnal; Sonam Gyeltshen; Binay Thapa Thapa; Prinyada Rodpradit; Piyawan Chinnawirotpisan; Wudtichai Manasatienkij; Louis R Macareo; Stefan Fernandez; Sonam Wangchuk; Chonticha Klungthong
Journal:  PLoS Negl Trop Dis       Date:  2020-04-22

7.  Assessment of a multiplex PCR and Nanopore-based method for dengue virus sequencing in Indonesia.

Authors:  Samuel C B Stubbs; Barbara A Blacklaws; Benediktus Yohan; Frilasita A Yudhaputri; Rahma F Hayati; Brian Schwem; Edsel M Salvaña; Raul V Destura; James S Lester; Khin S Myint; R Tedjo Sasmono; Simon D W Frost
Journal:  Virol J       Date:  2020-02-13       Impact factor: 4.099

8.  Does prior dengue virus exposure worsen clinical outcomes of Zika virus infection? A systematic review, pooled analysis and lessons learned.

Authors:  Jennifer Masel; Michael K McCracken; Todd Gleeson; Brian Morrison; George Rutherford; Allison Imrie; Richard G Jarman; Michael Koren; Simon Pollett
Journal:  PLoS Negl Trop Dis       Date:  2019-01-25

9.  Bayesian phylodynamics of avian influenza A virus H9N2 in Asia with time-dependent predictors of migration.

Authors:  Jing Yang; Nicola F Müller; Remco Bouckaert; Bing Xu; Alexei J Drummond
Journal:  PLoS Comput Biol       Date:  2019-08-06       Impact factor: 4.475

10.  A systematic review and evaluation of Zika virus forecasting and prediction research during a public health emergency of international concern.

Authors:  Pei-Ying Kobres; Jean-Paul Chretien; Michael A Johansson; Jeffrey J Morgan; Pai-Yei Whung; Harshini Mukundan; Sara Y Del Valle; Brett M Forshey; Talia M Quandelacy; Matthew Biggerstaff; Cecile Viboud; Simon Pollett
Journal:  PLoS Negl Trop Dis       Date:  2019-10-04
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