Literature DB >> 29702635

Sorting apples from oranges in single-cell expression comparisons.

Fiona K Hamey1, Berthold Göttgens1.   

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Year:  2018        PMID： 29702635     DOI： 10.1038/nmeth.4675

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  5 in total

1.  Alignment of single-cell trajectories to compare cellular expression dynamics.

Authors:  Ayelet Alpert; Lindsay S Moore; Tania Dubovik; Shai S Shen-Orr
Journal:  Nat Methods       Date:  2018-03-12       Impact factor: 28.547

2.  scmap: projection of single-cell RNA-seq data across data sets.

Authors:  Vladimir Yu Kiselev; Andrew Yiu; Martin Hemberg
Journal:  Nat Methods       Date:  2018-04-02       Impact factor: 28.547

3.  Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors.

Authors:  Laleh Haghverdi; Aaron T L Lun; Michael D Morgan; John C Marioni
Journal:  Nat Biotechnol       Date:  2018-04-02       Impact factor: 54.908

4.  The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.

Authors:  Cole Trapnell; Davide Cacchiarelli; Jonna Grimsby; Prapti Pokharel; Shuqiang Li; Michael Morse; Niall J Lennon; Kenneth J Livak; Tarjei S Mikkelsen; John L Rinn
Journal:  Nat Biotechnol       Date:  2014-03-23       Impact factor: 54.908

5.  Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation.

Authors:  Ximena Ibarra-Soria; Wajid Jawaid; Blanca Pijuan-Sala; Vasileios Ladopoulos; Antonio Scialdone; David J Jörg; Richard C V Tyser; Fernando J Calero-Nieto; Carla Mulas; Jennifer Nichols; Ludovic Vallier; Shankar Srinivas; Benjamin D Simons; Berthold Göttgens; John C Marioni
Journal:  Nat Cell Biol       Date:  2018-01-08       Impact factor: 28.824
  5 in total

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