Literature DB >> 29702633

ATAC Primer Tool for targeted analysis of accessible chromatin.

Kathryn E Yost1, Ava C Carter1, Jin Xu1, Ulrike Litzenburger1, Howard Y Chang1.   

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Year:  2018        PMID： 29702633      PMCID： PMC5942889          DOI： 10.1038/nmeth.4663

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  4 in total

1.  Landscape of monoallelic DNA accessibility in mouse embryonic stem cells and neural progenitor cells.

Authors:  Jin Xu; Ava C Carter; Anne-Valerie Gendrel; Mikael Attia; Joshua Loftus; William J Greenleaf; Robert Tibshirani; Edith Heard; Howard Y Chang
Journal:  Nat Genet       Date:  2017-01-23       Impact factor: 38.330

2.  Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position.

Authors:  Jason D Buenrostro; Paul G Giresi; Lisa C Zaba; Howard Y Chang; William J Greenleaf
Journal:  Nat Methods       Date:  2013-10-06       Impact factor: 28.547

3.  Highly recurrent TERT promoter mutations in human melanoma.

Authors:  Franklin W Huang; Eran Hodis; Mary Jue Xu; Gregory V Kryukov; Lynda Chin; Levi A Garraway
Journal:  Science       Date:  2013-01-24       Impact factor: 47.728

4.  Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers.

Authors:  Josh Lewis Stern; Dan Theodorescu; Bert Vogelstein; Nickolas Papadopoulos; Thomas R Cech
Journal:  Genes Dev       Date:  2015-10-29       Impact factor: 11.361
  4 in total
  5 in total

1.  SAFA facilitates chromatin opening of immune genes through interacting with anti-viral host RNAs.

Authors:  Lili Cao; Yujie Luo; Xuefei Guo; Shengde Liu; Siji Li; Junhong Li; Zeming Zhang; Yingchi Zhao; Qiao Zhang; Feng Gao; Xiong Ji; Xiang Gao; Yunfei Li; Fuping You
Journal:  PLoS Pathog       Date:  2022-06-03       Impact factor: 7.464

2.  CD38 reduces mitochondrial fitness and cytotoxic T cell response against viral infection in lupus patients by suppressing mitophagy.

Authors:  Ping-Min Chen; Eri Katsuyama; Abhigyan Satyam; Hao Li; Jose Rubio; Sungwook Jung; Sylvia Andrzejewski; J David Becherer; Maria G Tsokos; Reza Abdi; George C Tsokos
Journal:  Sci Adv       Date:  2022-06-15       Impact factor: 14.957

3.  Genomic methods in profiling DNA accessibility and factor localization.

Authors:  David C Klein; Sarah J Hainer
Journal:  Chromosome Res       Date:  2019-11-27       Impact factor: 5.239

4.  High throughput screening identifies SOX2 as a super pioneer factor that inhibits DNA methylation maintenance at its binding sites.

Authors:  Ludovica Vanzan; Hadrien Soldati; Victor Ythier; Santosh Anand; Simon M G Braun; Nicole Francis; Rabih Murr
Journal:  Nat Commun       Date:  2021-06-07       Impact factor: 14.919

5.  Regulation of CEACAM5 and Therapeutic Efficacy of an Anti-CEACAM5-SN38 Antibody-drug Conjugate in Neuroendocrine Prostate Cancer.

Authors:  Diana C DeLucia; Thomas M Cardillo; Lisa Ang; Mark P Labrecque; Ailin Zhang; James E Hopkins; Navonil De Sarkar; Ilsa Coleman; Rui M Gil da Costa; Eva Corey; Lawrence D True; Michael C Haffner; Michael T Schweizer; Colm Morrissey; Peter S Nelson; John K Lee
Journal:  Clin Cancer Res       Date:  2020-11-16       Impact factor: 13.801
  5 in total

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