Literature DB >> 29696600

High Cooperativity in Negative Feedback can Amplify Noisy Gene Expression.

Pavol Bokes1, Yen Ting Lin2,3, Abhyudai Singh4.   

Abstract

Burst-like synthesis of protein is a significant source of cell-to-cell variability in protein levels. Negative feedback is a common example of a regulatory mechanism by which such stochasticity can be controlled. Here we consider a specific kind of negative feedback, which makes bursts smaller in the excess of protein. Increasing the strength of the feedback may lead to dramatically different outcomes depending on a key parameter, the noise load, which is defined as the squared coefficient of variation the protein exhibits in the absence of feedback. Combining stochastic simulation with asymptotic analysis, we identify a critical value of noise load: for noise loads smaller than critical, the coefficient of variation remains bounded with increasing feedback strength; contrastingly, if the noise load is larger than critical, the coefficient of variation diverges to infinity in the limit of ever greater feedback strengths. Interestingly, feedbacks with lower cooperativities have higher critical noise loads, suggesting that they can be preferable for controlling noisy proteins.

Keywords:  Asymptotic expansions; Delayed production; Negative feedback; Protein bursting; Stochastic gene expression

Mesh:

Year:  2018        PMID: 29696600     DOI: 10.1007/s11538-018-0438-y

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  2 in total

1.  Exponential equilibration of genetic circuits using entropy methods.

Authors:  José A Cañizo; José A Carrillo; Manuel Pájaro
Journal:  J Math Biol       Date:  2018-08-17       Impact factor: 2.259

2.  Mixture distributions in a stochastic gene expression model with delayed feedback: a WKB approximation approach.

Authors:  Pavol Bokes; Alessandro Borri; Pasquale Palumbo; Abhyudai Singh
Journal:  J Math Biol       Date:  2020-06-24       Impact factor: 2.259

  2 in total

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