Literature DB >> 29694872

Dynamics of a Protein Chain Motor Driving Helical Bacteria under Stress.

Julian Roth1, Matthias D Koch2, Alexander Rohrbach3.   

Abstract

The wall-less, helical bacterial genus Spiroplasma has a unique propulsion system; it is not driven by propeller-like flagella but by a membrane-bound, cytoplasmic, linear motor that consists of a contractile chain of identical proteins spanning the entire cell length. By a coordinated spread of conformational changes of the proteins, kinks propagate in pairs along the cell body. However, the mechanisms for the initiation or delay of kinks and their coordinated spread remain unclear. Here, we show how we manipulate the initiation of kinks, their propagation velocities, and the time between two kinks for a single cell trapped in an optical line potential. By interferometric three-dimensional shape tracking, we measured the cells' deformations in response to various external stress situations. We observed a significant dependency of force generation on the cells' local ligand concentrations (likely ATP) and ligand hydrolysis, which we altered in different ways. We developed a mechanistic, mathematical model based on Kramer's rates, describing the subsequent cooperative and conformational switching of the chain's proteins. The model reproduces our experimental observations and can explain deformation characteristics even when the motor is driven to its extreme. Nature has invented a set of minimalistic mechanical driving concepts. To understand or even rebuild them, it is essential to reveal the molecular mechanisms of such protein chain motors, which need only two components-coupled proteins and ligands-to function.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 29694872      PMCID: PMC5937200          DOI: 10.1016/j.bpj.2018.02.043

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  55 in total

1.  Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase.

Authors:  R Yasuda; H Noji; M Yoshida; K Kinosita; H Itoh
Journal:  Nature       Date:  2001-04-19       Impact factor: 49.962

2.  The motility of mollicutes.

Authors:  Charles W Wolgemuth; Oleg Igoshin; George Oster
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

3.  Nonblinking and long-lasting single-molecule fluorescence imaging.

Authors:  Ivan Rasnik; Sean A McKinney; Taekjip Ha
Journal:  Nat Methods       Date:  2006-10-01       Impact factor: 28.547

4.  Hsp70 chaperone ligands control domain association via an allosteric mechanism mediated by the interdomain linker.

Authors:  Joanna F Swain; Gizem Dinler; Renuka Sivendran; Diana L Montgomery; Mathias Stotz; Lila M Gierasch
Journal:  Mol Cell       Date:  2007-04-13       Impact factor: 17.970

5.  Model for self-propulsive helical filaments: kink-pair propagation.

Authors:  Hirofumi Wada; Roland R Netz
Journal:  Phys Rev Lett       Date:  2007-09-07       Impact factor: 9.161

6.  Diverse uncultivated ultra-small bacterial cells in groundwater.

Authors:  Birgit Luef; Kyle R Frischkorn; Kelly C Wrighton; Hoi-Ying N Holman; Giovanni Birarda; Brian C Thomas; Andrea Singh; Kenneth H Williams; Cristina E Siegerist; Susannah G Tringe; Kenneth H Downing; Luis R Comolli; Jillian F Banfield
Journal:  Nat Commun       Date:  2015-02-27       Impact factor: 14.919

Review 7.  Bacterial flagellar motor.

Authors:  Yoshiyuki Sowa; Richard M Berry
Journal:  Q Rev Biophys       Date:  2008-05       Impact factor: 5.318

8.  A structural framework for a near-minimal form of life: mass and compositional analysis of the helical mollicute Spiroplasma melliferum BC3.

Authors:  Shlomo Trachtenberg; Peter Schuck; Terry M Phillips; S Brian Andrews; Richard D Leapman
Journal:  PLoS One       Date:  2014-02-21       Impact factor: 3.240

9.  Diversity in ATP concentrations in a single bacterial cell population revealed by quantitative single-cell imaging.

Authors:  Hideyuki Yaginuma; Shinnosuke Kawai; Kazuhito V Tabata; Keisuke Tomiyama; Akira Kakizuka; Tamiki Komatsuzaki; Hiroyuki Noji; Hiromi Imamura
Journal:  Sci Rep       Date:  2014-10-06       Impact factor: 4.379

10.  Fast, label-free super-resolution live-cell imaging using rotating coherent scattering (ROCS) microscopy.

Authors:  Felix Jünger; Philipp V Olshausen; Alexander Rohrbach
Journal:  Sci Rep       Date:  2016-07-28       Impact factor: 4.379

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  1 in total

1.  Coexistence of Two Chiral Helices Produces Kink Translation in Spiroplasma Swimming.

Authors:  Daisuke Nakane; Tatsuro Ito; Takayuki Nishizaka
Journal:  J Bacteriol       Date:  2020-03-26       Impact factor: 3.490

  1 in total

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