Literature DB >> 29692556

Assessment of genetic diversity and population structure in gladiolus (Gladiolus hybridus Hort.) by ISSR markers.

Veena Chaudhary1, Mukesh Kumar2, Shailendra Sharma3, Navneet Kumar2, Vipin Kumar2, Hemant Kumar Yadav4, Shiveta Sharma3, Ujjwal Sirohi2.   

Abstract

ISSR (Inter simple sequence repeat) markers were used to assess the genetic diversity and population structure in 53 indigenous and exotic genotypes of gladiolus (Gladiolus hybridus Hort.). Molecular markers analysis showed PIC ranges from 0.42 (ISSR 861) to 0.99 (ISSR 855, ISSR 856 and ISSR 889) with an average 0.812, marker index ranged from 0.99 (ISSR 889) to 9.26 (ISSR 851) with an average 4.66 and resolving power of the primers ranged from 0.03 (ISSR 889) to 11.58 (ISSR 861) with an average value 3.80. The dendrogram based UPGMA clustering showed that all the 53 genotypes grouped into three main clusters. Nei's gene diversity (Na) varied from 0.929 to 1.717, effective number of alleles (Ne) varied from 1.262 to 1.369, Shannon's information index (I) ranged from 0.251 to 0.359 and gene diversity (He) was in the range from 0.167 to 0.229. Population structure analysis revealed three groups in which 32 genotypes were admixture types.

Entities:  

Keywords:  Gladiolus; Inter simple sequence repeats; Molecular diversity; Population structure

Year:  2018        PMID: 29692556      PMCID: PMC5911264          DOI: 10.1007/s12298-018-0519-2

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  5 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

3.  Analysis of genetic relationships and identification of lily cultivars based on inter-simple sequence repeat markers.

Authors:  G F Cui; L F Wu; X N Wang; W J Jia; Q Duan; L L Ma; Y L Jiang; J H Wang
Journal:  Genet Mol Res       Date:  2014-07-29

4.  Analysis of gene diversity in subdivided populations.

Authors:  M Nei
Journal:  Proc Natl Acad Sci U S A       Date:  1973-12       Impact factor: 11.205

Review 5.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

  5 in total
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1.  Random amplified polymorphic DNA and inter simple sequence repeat markers reveals genetic diversity between micro propagated, wild and field cultivated genotypes of Gloriosa superba: an endangered medicinal plant.

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Journal:  Mol Biol Rep       Date:  2021-03-25       Impact factor: 2.316

2.  Genetic Analysis of Prunus salicina L. by Random Amplified Polymorphic DNA (RAPD) and Intersimple Sequence Repeat (ISSR).

Authors:  Jun Li; Guangchun Gao; Bin Li; Bai Li; Qihua Lu
Journal:  Genet Res (Camb)       Date:  2022-04-18       Impact factor: 1.375

3.  Biological effects of gamma-ray radiation on tulip (Tulipa gesneriana L.).

Authors:  Yirui Li; Li Chen; Xiaodie Zhan; Liang Liu; Feihong Feng; Zihua Guo; Dan Wang; Hao Chen
Journal:  PeerJ       Date:  2022-01-19       Impact factor: 2.984

  3 in total

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