Literature DB >> 29681741

An updated checklist of the lichens of St. Eustatius, Netherlands Antilles.

André Aptroot1, Michael Stech2,3.   

Abstract

In the course of a multi-taxon biodiversity inventory for the island of St. Eustatius, lichens were collected from 11 plots representing different vegetation types. From these collections, 126 lichen species are reported, 54 of which are new reports for St. Eustatius. Most species could be identified to species level based on morphological and chemical characters. In a few cases, mtSSU DNA sequences were generated for a preliminary molecular identification and future phylogenetic studies. In total, 263 identified lichen species are currently known from St. Eustatius, as well as some additional genera with yet unidentified species and lichenicolous fungi.

Entities:  

Keywords:  Biodiversity inventory; St. Eustatius; lichens; mtSSU

Year:  2018        PMID: 29681741      PMCID: PMC5904402          DOI: 10.3897/mycokeys.33.23911

Source DB:  PubMed          Journal:  MycoKeys        ISSN: 1314-4049            Impact factor:   2.984


Introduction

Sint Eustatius is a small island (21 km2) in the northern Leeward Islands part of the West Indies. It is one of the six islands of the Netherlands Antilles and, since 2010, a special municipality of the Netherlands. Sint Eustatius is roughly divided into three parts, the Northern Hills, the urbanised central area (‘Cultuurvlakte’) and the southern part dominated by the steep dormant volcano The Quill (600 m elev.). Although the whole island of St. Eustatius has been heavily impacted by human activities, the northern and southern parts are nowadays designated as National Parks with varied vegetation types especially on the slopes of The Quill. The latter comprise, for example, thorny woodlands, deciduous to evergreen seasonal forests, dry evergreen forest, montane thickets and elfin woodland (Stoffers 1956). A re-classification of the vegetation of St. Eustatius, based on cluster analysis of sample plots, resulted in 13 vegetation types characterised by different combinations of individual vascular plant species (Freitas et al. 2014). Just as in almost all other groups of organisms, lichens are most diverse in the tropics (Sipman and Aptroot 2001). On St. Eustatius, they are commonly present on various substrates, including tree bark and twigs, siliceous rock, limestone, dead wood and living leaves. Despite their abundance, the lichen flora of St. Eustatius is still incompletely known. The authors are aware of only nine publications citing in total 14 lichen species from St. Eustatius, viz. (Eschw.) Müll. Arg. and (Nyl.) Müll. Arg. (Brako 1991), (Müll. Arg.) R.C. Harris (Harris 1995), (Fée) Tehler (Tehler 1997), Müll. Arg. (Harris 1998, as Vain.), Aptroot, described based on material from St. Eustatius and Costa Rica (Aptroot 2009), Sipman, described based on material from St. Eustatius, as well as (Fée) Tehler, and (Fr.) Tehler (Sipman 2009), Bory (Aptroot and Schumm 2011), (Fée) Tehler (Tehler et al. 2013), as well as (Taylor) Aptroot & Lücking, (Fée) Aptroot & Lücking and Müll. Arg. (Aptroot and Lücking 2016). The main source of information about the lichen flora of St. Eustatius is the online portal ‘Plants and Lichens of St. Eustatius’ (Boom et al. 2009). It contains a list with 209 lichen species, based on specimens collected by H. Sipman and W.R. Buck in 2008, identified by H. Sipman and mostly hosted in B (some in NY). In addition, some identified specimens are present in various other herbaria, some of which can be searched online. For instance, the database of BR cites the following identified specimens from St. Eustatius, collected by R. Hensen in 1991 and identified by the first author: Jagadeesh Ram & Aptroot, (Ach.) Müll. Arg. and (Kremp.) D.J. Galloway. In 2015, a plot-based, multi-taxon biodiversity inventory of St. Eustatius was carried out by Naturalis Biodiversity Center, the European Invertebrate Survey (EIS) and different Dutch non-governmental organisations, together with St. Eustatius National Parks Foundation (STENAPA) and students from different Dutch universities. Here, the lichen records of that inventory are reported and an updated checklist of the lichens known from St. Eustatius is presented.

Materials and methods

As part of a multi-taxon inventory, lichens were collected on St. Eustatius from 11 plots (25 m × 25 m) in different main vegetation types according to Freitas et al. (2014). Two plots (H1, H2) were situated in the Northern Hills area, eight (M1−M5, M7−M9) on and around The Quill in the southern part of the island and one (U1) in the central urban area. Details concerning the location and vegetation characteristics of the plot locations and the multi-taxon sampling approach are described in van Andel et al. (2016). Lichens were collected using a knife or hammer and chisel and subsequently air-dried and stored in paper bags. Specimens were observed and identified by the first author using an Olympus SZX7 stereomicroscope and an Olympus BX50 compound microscope with interference contrast, connected to a Nikon Coolpix digital camera. Sections were mounted in tap water, in which all measurements were also taken. The chemistry of selected specimens was investigated by thin-layer chromatography (Orange et al. 2001), using solvent A. DNA analysis based on mitochondrial ribosomal small subunit (mtSSU) sequences was carried out for ten unidentifiable or provisionally identified specimens of good quality (indicated in Table 1). Although the nuclear ribosomal ITS region is the generally accepted fungal DNA barcode locus (Schoch et al. 2012), mtSSU was chosen since more mtSSU than ITS sequences have yet been published for several of the genera or families to which the respective specimens putatively belong.
Table 1.

Lichenised and lichenicolous fungi recorded in 11 plots on St. Eustatius. Species names in earlier publications are indicated in brackets. Author names are given in Table 2. Plots H1 and H2 are situated in the Northern Hills, M2−M9 on and around the volcano The Quill in the southern part of the island and U1 in the central urban area. Substrates occupied by each taxon are indicated per plot; b: bark, k: limestone, l: leaves, r: siliceous rock, s: soil, w: wood. Asterisks indicate first records for St. Eustatius (asterisks in brackets indicate additional taxa that are not yet identified to species level). Black dots (•) indicate specimens from which DNA was extracted.

TaxonH1H2M1M2M3M4M5M7M8M9U1
(*)Acanthothecis sp. •b
Alyxoria culmigena (Opegrapha herbarum)rwb
*Alyxoria variabbbb
*Amandinea multisporab
*Anisomeridium subprostansb
Anisomeridium tamarindi b
(*)Anisomeridium sp. corticate c. pycnidia •b
*Anisomeridium terminatumb
Arthonia antillarum bb
Arthonia caribaea b
Arthonia conferta bbbbbbb
Arthonia cyrtodes b
Arthonia minuta bb
*Arthonia parantillarumbb
Arthothelium macrothecum bb
*Bacidia medialisb, rr
(*)Bacidia sp. apotheciate •b, w
(*)Bacidia sp. sorediate •b
Bactrospora denticulata bbbbb
*Bactrospora jenikiib
*Bogoriella annonaceabb
*Brigantiaea leucoxanthab
Buellia dejungens rrrrr
*Buellia griseovirensww
Buellia mamillana (Buellia glaziouana)r
Caloplaca leptozona rr
*Caloplaca obscurellaw
Coenogonium linkii bb
*Coenogonium saepincolaw
Coenogonium strigosum b
Coniocarpon cinnabarinum (Arthonia cinnabarina)b
*Crespoa carneopruinatab, r
*Cresponea flavar
*Cryptothecia punctosorediatab
Cryptothecia striata bb, r
(*)Cryptothecia sp. isidiate •b
(*)Cryptothecia sp. sterile •b
*Dactylospora saxatilis (lichenicolous on Pertusaria praetervisa)r
Dichosporidium nigrocinctum b, rb, r
*Dictyomeridium amylosporumbb
Diorygma hieroglyphicum b
Diorygma poitaei b
*Diorygma pruinosumb
*Endocarpon pallidulumrrr, kr, sr
Enterographa pallidella bb
Enterographa subserialis b
Flakea papillata bb, r, wb, rr
Glyphis scyphulifera b
Graphis caesiella b
*Graphis cinctab
Graphis dendrogramma bb
*Graphis libratab
Gyalolechia bassiae (Caloplaca bassiae)bb, r
*Hafellia curatellaeb
Hyperphyscia adglutinata bb, rb
Lathagrium neglectum (Collema neglectum)b
Lecanora legalloana rrrrr
*Lecanora leproplacabbb
Lecanora leprosa r
Lecanora prosecha rrrrrr
Lecanora sulfurescens r
*Lepraria finkiib
*Leprocollema nova-caledonianumw
Letrouitia domingensis b
Malmidea piperis (Malcolmiella piperis)b
*Malmidea psychotrioidesb
Malmidea vinosa (Malcolmiella vinosa)b
Mazosia carnea (Mazosia ocellata)bb
(*)Melaspilea sp. (lichenicolous on Pyrenula dissimulans)b
*Microtheliopsis uleanal
*Mycoporum eschweileribbbbb
Nyungwea anguinella (Enterographa anguinella)b
*Opegrapha astraeabb
*Opegrapha lithyrgizar
*Opegrapha quintanab
(*)Opegrapha sp.k
Peltula bolanderi r
Peltula obscurans rrr
Pertusaria coccopoda rr
Pertusaria praetervisa rr
*Pertusaria texanab
Pertusaria xanthodes b
*Phaeographis crispatab
Phaeographis dendritica b
*Phyllopeltula corticolab
Phyllopsora corallina bb, rr
Physcia atrostriata b
*Physcia erumpensb
*Physcia integratabb
Physcia sorediosa b
*Porina conspersab, rr
Porina epiphylla l
Porina internigrans bb
*Porina leptalear
Porina nucula b, r
*Porina rubentiorl
Porina tetracerae bbr
*Porina thaxteril
(*)Psorotichia cf. americanar
*Pyrenopsis antillarumr
*Pyrenula adactabbbb
Pyrenula breutelii (Pyrenula macularis)bb
Pyrenula cocoes bbbbb
*Pyrenula cruentab
*Pyrenula dissimulansbbbbb
Pyrenula nitidula b
Pyxine cocoes b, rrrrb
*Ramalina stoffersiir
*Rinodina antillarumr
*Rinodina colobinoidesbb
Rinodina pyxinoides rrrrrr
Sarcographa cf. tricosab
Squamulea subsoluta (Caloplaca subsoluta)rrrr
*Staurolemma dussiib
*Sticta xanthotroparr
*Stigmatochroma gerontoidesw
(*)Stigmidium cf. schaererik
*Strigula decipiensr
*Strigula phaeab, r
Strigula smaragdula l
*Syncesia decussansb
*Thelenella luridellarrr
(*)Thelidium cf. decipiensk
(*)Verrucaria cf. dolosar
*Verrucaria nigrescensr
(*)Wetmoreana cf. appressarr
Genomic DNA was extracted using the NucleoMag 96 Plant kit (Macherey-Nagel) on the KingFisher Flex Purification System (ThermoFisher Scientific). The mtSSU region was PCR-amplified following Zoller et al. (1999) in terms of primers (mrSSU1/mrSSU3R) and the PCR protocol. PCR products were purified and sequenced at BaseClear B.V. (www.baseclear.com) using the amplification primers. Sequences were assembled and edited using Geneious v8.1.8 (Biomatters Ltd.) and subjected to a BLAST search (Altschul et al. 1990) against the GenBank database (megablast; considering, where possible, BLAST results with E value of 0.0 and query cover >90 %). Sequences are available in GenBank under accession numbers MH028639−MH028646. To compile an updated list of the lichens of St. Eustatius, literature and internet sources were exhaustively consulted for previous reports and previous collectors were contacted for additional information. Lichenised and lichenicolous fungi recorded in 11 plots on St. Eustatius. Species names in earlier publications are indicated in brackets. Author names are given in Table 2. Plots H1 and H2 are situated in the Northern Hills, M2−M9 on and around the volcano The Quill in the southern part of the island and U1 in the central urban area. Substrates occupied by each taxon are indicated per plot; b: bark, k: limestone, l: leaves, r: siliceous rock, s: soil, w: wood. Asterisks indicate first records for St. Eustatius (asterisks in brackets indicate additional taxa that are not yet identified to species level). Black dots (•) indicate specimens from which DNA was extracted.
Table 2.

Updated checklist of the lichens of St. Eustatius.

SpeciesReferences
Lichens
Acarospora chrysops (Tuck.) H.Magn. Boom et al. (2009) as Acarospora dissipata H.Magn.
Alyxoria culmigena (Lib.) Ertz Boom et al. (2009) as Opegrapha herbarum Mont., present study
Alyxoria ochrocheila (Nyl.) Ertz & Tehler Boom et al. (2009) as Opegrapha ochrocheila Nyl.
Alyxoria varia (Pers.) Ertz & Tehlerpresent study
Amandinea efflorescens (Müll. Arg.) Marbach Boom et al. (2009)
Amandinea multispora (Kalb & Vězda) Marbachpresent study
Amandinea prospersa (Nyl.) Elix & H. Mayhofer Boom et al. (2009) as Buellia prospersa (Nyl.) Riddle
Anisomeridium americanum (A.Massal.) R.C. Harris Boom et al. (2009)
Anisomeridium excellens (Müll. Arg.) R.C. Harris Boom et al. (2009), Harris (1995)
Anisomeridium subprostans (Nyl.) R.C. Harrispresent study
Anisomeridium tamarindi (Fée) R.C. Harris Boom et al. (2009), present study
Anisomeridium terminatum (Nyl.) R.C. Harrispresent study
Anisomeridium tuckerae (R.C. Harris) R.C. Harris Boom et al. (2009)
Arthonia antillarum (Fée) Nyl. Boom et al. (2009), present study
Arthonia caribaea (Ach.) A. Massal. Boom et al. (2009), present study
Arthonia conferta (Fée) Nyl. Boom et al. (2009), present study
Arthonia cyanea Müll. Arg. Boom et al. (2009)
Arthonia cyrtodes Nyl. Boom et al. (2009), present study
Arthonia minuta Vain. Boom et al. (2009), present study
Arthonia parantillarum Aptrootpresent study
Arthothelium macrothecum (Fée) A. Massal. Boom et al. (2009), present study
Astrothelium bicolor (Taylor) Aptroot & Lücking Boom et al. (2009) as Trypethelium nitidiusculum (Nyl.) R.C. Harris, Aptroot & Lücking (2016)
Astrothelium phlyctaena (Fée) Aptroot & Lücking Boom et al. (2009) as Trypethelium ochroleucum (Eschw.) Nyl., Aptroot & Lücking (2016)
Bacidia medialis (Tuck.) Zahlbr.present study
Bactrospora denticulata (Vain.) Egea & Torrente Boom et al. (2009), present study
Bactrospora jenikii (Vězda) Egea & Torrentepresent study
Bactrospora myriadea (Fée) Egea & Torrente Boom et al. (2009)
Baculifera intermedioides Marbach Boom et al. (2009)
Blastenia brittonii Zahlbr. Boom et al. (2009) as Caloplaca brittonii (Zahlbr.) ined.
Bogoriella annonacea (Müll. Arg.) Aptroot & Lückingpresent study
Brigantiaea leucoxantha (Spreng.) R. Sant. & Hafellnerpresent study
Brownliella cinnabarina (Ach.) S.Y. Kondr., Kärnefelt, A. Thell, Elix, J.Kim, A.S.Kondr. & J.-S.Hur Boom et al. (2009) as Caloplaca cinnabarina (Ach.) Zahlbr.
Buellia boergesenii Imshaug Boom et al. (2009)
Buellia dejungens (Nyl.) Vain. Boom et al. (2009), present study
Buellia griseovirens (Turner & Borrer ex Sm.) Almb.present study
Buellia mamillana (Tuck.) W.A. Weber Boom et al. (2009) as Buellia glaziouana (Kremp.) Müll. Arg., present study
Buellia posthabita (Nyl.) Zahlbr. Boom et al. (2009)
Bulbothrix scortella (Nyl.) Hale Boom et al. (2009)
Bulbothrix suffixa (Stirt.) Hale Boom et al. (2009)
Byssoloma leucoblepharum (Nyl.) Vain. Boom et al. (2009)
Caloplaca diplacia (Ach.) Riddle Boom et al. (2009)
Caloplaca leptozona (Nyl.) Zahlbr. Boom et al. (2009), present study
Caloplaca obscurella (J. Lahm) Th. Fr.present study
Canoparmelia martinicana (Nyl.) Elix & Hale Boom et al. (2009)
Carbacanthographis triphoroides (M. Wirth & Hale) Lücking Boom et al. (2009)
Chapsa cinchonarum (Fée) Frisch Boom et al. (2009)
Chrysothrix xanthina (Vain.) Kalb Boom et al. (2009)
Cladonia corymbites Nyl. Boom et al. (2009)
Cladonia didyma (Fée) Vain. Boom et al. (2009)
Cladonia subradiata (Vain.) Sandst. Boom et al. (2009)
Coccocarpia palmicola (Spreng.) Arv. & D.J. Galloway Boom et al. (2009)
Coccocarpia pellita (Ach.) Müll. Arg. Boom et al. (2009)
Coenogonium interpositum Nyl. Boom et al. (2009)
Coenogonium leprieurii (Mont.) Nyl. Boom et al. (2009)
Coenogonium linkii Ehrenb. Boom et al. (2009), present study
Coenogonium saepincola Aptroot, Sipman & Lückingpresent study
Coenogonium strigosum Rivas Plata, Lücking & Chaves Boom et al. (2009), present study
Coenogonium subdilutum (Malme) Lücking, Aptroot & Sipman Boom et al. (2009)
Coniocarpon cinnabarinum DC. Boom et al. (2009) as Arthonia cinnabarina (DC.) Wallr., present study
Cratiria lauricassiae (Fée) Marbach Boom et al. (2009)
Crespoa carneopruinata (Zahlbr.) Lendemer & B.P. Hodk.present study
Cresponea flava (Vain.) Egea & Torrentepresent study
Cresponea leprieurii (Mont.) Egea & Torrente Boom et al. (2009)
Cresponea proximata (Nyl.) Egea & Torrente Boom et al. (2009)
Cryptolechia carneolutea (Tuck.) A. Massal. Boom et al. (2009)
Cryptothecia megalocarpa (Müll. Arg.) R. Sant. Boom et al. (2009)
Cryptothecia punctosorediata Sparriuspresent study
Cryptothecia striata G. Thor Boom et al. (2009), present study
Dichosporidium nigrocinctum (Ehrenb.) G. Thor Boom et al. (2009), present study
Dictyomeridium amylosporum (Vain.) Aptroot, M.P. Nelsen & Lückingpresent study
Diorygma hieroglyphicum (Pers.) Staiger & Kalb Boom et al. (2009), present study
Diorygma poitiaei (Fée) Kalb, Staiger & Elix Boom et al. (2009), present study
Diorygma pruinosum (Eschw.) Kalb, Staiger & Elixpresent study
Diploschistes actinostomus (Ach.) Zahlbr. Boom et al. (2009)
Diploschistes aeneus (Müll. Arg.) Lumbsch Boom et al. (2009)
Diploschistes prominens (Vain.) Lumbsch Boom et al. (2009)
Dirina paradoxa (Fée) Tehler Boom et al. (2009) as Dirina approximata subsp. hioramii (B. de Lesd.) Tehler, Tehler et al. (2013)
Dirinaria aegialita (Ach.) B.J. Moore Boom et al. (2009)
Endocarpon pallidulum (Nyl.) Nyl.present study
Enterographa compunctula (Nyl.) Redinger Boom et al. (2009)
Enterographa multilocularis (Müll. Arg.) Sparrius Boom et al. (2009)
Enterographa pallidella (Nyl.) Redinger Boom et al. (2009), present study
Enterographa perez-higaredae Herrera-Camp. & Lücking Boom et al. (2009)
Enterographa sipmanii Sparrius Boom et al. (2009)
Enterographa subserialis (Nyl.) Redinger Boom et al. (2009), present study
Eremothecella microcephalica Sipman Boom et al. (2009)
Fellhanera santessonii Barillas & Lücking Boom et al. (2009)
Fissurina dumastii Fée Boom et al. (2009)
Flakea papillata O.E. Erikss. Boom et al. (2009), present study
Glyphis cicatricosa Ach. Boom et al. (2009)
Glyphis scyphulifera (Ach.) Staiger Boom et al. (2009), present study
Graphis caesiella Vain. Boom et al. (2009), present study
Graphis chondroplaca (Redinger) Lücking Boom et al. (2009)
Graphis cincta (Pers.) Aptrootpresent study
Graphis dendrogramma Nyl. Boom et al. (2009), present study
Graphis furcata Fée Boom et al. (2009)
Graphis glaucescens Fée Boom et al. (2009)
Graphis librata C. Knightpresent study
Graphis lineola Ach. Boom et al. (2009)
Graphis tenella Ach. Boom et al. (2009)
Graphis tenellula Vain. Boom et al. (2009)
Gyalectidium filicinum Müll. Arg. Boom et al. (2009)
Gyalolechia bassiae (Ach.) Søchting, Frödén & Arup ex Ahti Boom et al. (2009) as Caloplaca bassiae (Ach.) Zahlbr., present study
Hafellia bahiana (Malme) Sheard Boom et al. (2009)
Hafellia curatellae (Malme) Marbachpresent study
Herpothallon aurantiacoflavum (B. de Lesd.) Aptroot, Lücking & G.Thor Boom et al. (2009)
Heterodermia albicans (Pers.) Swinscow & Krog Boom et al. (2009)
Heterodermia galactophylla (Tuck.) W.L. Culb. Boom et al. (2009)
Heterodermia lutescens (Kurok.) Follmann Boom et al. (2009)
Heterodermia obscurata (Nyl.) Trevis. Boom et al. (2009)
Heterodermia squamulosa (Degel.) W.L. Culb. Boom et al. (2009)
Heterodermia verrucifera (Kurok.) W.A. Weber Boom et al. (2009)
Hyperphyscia adglutinata (Flörke) H. Mayrhofer & Poelt Boom et al. (2009), present study
Hyperphyscia minor (Fée) D.D. Awasthi Boom et al. (2009)
Lathagrium neglectum (Degel.) Otálora, P.M. Jørg. & Wedin Boom et al. (2009) as Collema neglectum Degel., present study
Lecanactis epileuca (Nyl.) Tehler Boom et al. (2009)
Lecanora galactiniza Nyl. Boom et al. (2009)
Lecanora legalloana Elix & Øvstedal Boom et al. (2009), present study
Lecanora leproplaca Zahlbr.present study
Lecanora leprosa Fée Boom et al. (2009), present study
Lecanora prosecha Ach. Boom et al. (2009), present study
Lecanora sulfurescens Fée Boom et al. (2009), present study
Leiorreuma exaltatum (Mont. & Bosch) Staiger Boom et al. (2009)
Lepraria finkii (B. de Lesd.) R.C. Harrispresent study
Leprocollema novacaledonianum A.L. Sm.present study
Leptogium austroamericanum (Malme) C.W. Dodge Boom et al. (2009)
Leptogium azureum (Sw.) Mont. Boom et al. (2009)
Leptogium cyanescens (Rabenh.) Körb. Boom et al. (2009)
Leptogium marginellum (Sw.) Gray Boom et al. (2009)
Letrouitia domingensis (Pers.) Hafellner & Bellem. Boom et al. (2009), present study
Leucodecton bisporum (Nyl.) Sipman & Lücking Boom et al. (2009)
Leucodecton compunctum (Ach.) A. Massal. Boom et al. (2009)
Loflammia gabrielis (Müll. Arg.) Vezda Boom et al. (2009)
Malmidea piperis (Spreng.) Kalb, Rivas Plata & Lumbsch Boom et al. (2009) as Malcolmiella piperis (Spreng.) Kalb & Lücking, present study
Malmidea psychotrioides (Kalb & Lücking) Kalb, Rivas Plata & Lumbschpresent study
Malmidea vinosa (Eschw.) Kalb, Rivas Plata & Lumbsch Boom et al. (2009) as Malcolmiella vinosa (Eschw.) Kalb & Lücking, present study
Mazosia carnea (Eckfelt) Aptroot & M. Cáceres Boom et al. (2009) as Mazosia ocellata (Nyl.) R.C. Harris, present study
Mazosia phyllosema (Nyl.) Zahlbr. Boom et al. (2009)
Megalaria bengalensis Jagadeesh Ram & AptrootHensen (BR)
Melanotrema meiospermum (Nyl.) Frisch Boom et al. (2009)
Microtheliopsis uleana Müll. Arg.present study
Mycoporum eschweileri (Müll. Arg.) R.C. Harrispresent study
Myriostigma candidum Kremp. Boom et al. (2009) as Cryptothecia candida (Kremp.) R. Sant.: incorrect report
Myriotrema myriotremoides (Nyl.) Hale Boom et al. (2009)
Myriotrema olivaceum Fée Boom et al. (2009)
Nyungwea anguinella (Nyl.) Aptroot Boom et al. (2009) as Enterographa anguinella (Nyl.) Redinger, present study
Ocellularia depressa (Mont.) Hale Boom et al. (2009)
Ocellularia interposita (Nyl.) Hale Boom et al. (2009)
Ocellularia terebrata (Ach.) Müll. Arg. Boom et al. (2009)
Opegrapha astraea Tuck.present study
Opegrapha lithyrgiza Vain.present study
Opegrapha quintana Redingerpresent study
Pannaria prolificans Vain. Boom et al. (2009)
Parmotrema crinitum (Ach.) M. Choisy Boom et al. (2009)
Parmotrema endosulphureum (Hillmann) Hale Boom et al. (2009)
Parmotrema praesorediosum (Nyl.) Hale Boom et al. (2009)
Parmotrema tinctorum (Nyl.) Hale Boom et al. (2009)
Parmotrema ultralucens (Krog) Hale Boom et al. (2009)
Peltula bolanderi (Tuck.) Wetmore Boom et al. (2009), present study
Peltula obscurans (Nyl.) Gyeln. Boom et al. (2009), present study
Pertusaria coccopoda Vain. Boom et al. (2009), present study
Pertusaria leioplacella Nyl. Boom et al. (2009)
Pertusaria praetervisa Vain. Boom et al. (2009), present study
Pertusaria texana Müll. Arg.present study
Pertusaria xanthodes Müll. Arg. Boom et al. (2009), present study
Phaeographis crispata Kalb & Matthes-Leichtpresent study
Phaeographis dendritica (Ach.) Müll. Arg. Boom et al. (2009), present study
Phaeographis intricans (Nyl.) Staiger Boom et al. (2009)
Phaeographis scalpturata (Ach.) Staiger Boom et al. (2009)
Phyllopeltula corticola (Büdel & R. Sant.) Kalbpresent study
Phyllopsora chlorophaea (Müll. Arg.) Zahlbr. Boom et al. (2009)
Phyllopsora corallina (Eschw.) Müll. Arg. Brako (1991), Boom et al. (2009), present study
Phyllopsora glaucescens Timdal Boom et al. (2009)
Phyllopsora parvifoliella (Nyl.) Müll. Arg. Brako (1991), Boom et al. (2009)
Physcia atrostriata Moberg Boom et al. (2009), present study
Physcia crispa Nyl. Boom et al. (2009)
Physcia erumpens Mobergpresent study
Physcia integrata Mobergpresent study
Physcia sinuosa Moberg Boom et al. (2009)
Physcia sorediosa (Vain.) Lynge Boom et al. (2009), present study
Physcia tenuis Moberg Boom et al. (2009)
Platythecium colliculosum (Mont.) Staiger Boom et al. (2009)
Platythecium leiogramma (Nyl.) Staiger Boom et al. (2009)
Polymeridium quinqueseptatum (Nyl.) R.C. Harris Boom et al. (2009)
Porina conspersa Malmepresent study
Porina epiphylla (Fée) Fée Boom et al. (2009), present study
Porina internigrans (Nyl.) Müll. Arg. Boom et al. (2009), present study
Porina leptalea (Durieu & Mont.) A.L. Sm.present study
Porina mastoidea (Ach.) Müll. Arg.Hensen (BR), Boom et al. (2009)
Porina nitidula Müll. Arg. Boom et al. (2009)
Porina nucula Ach. Boom et al. (2009), present study
Porina octomera (Müll. Arg.) F.Schill. Boom et al. (2009)
Porina rubentior (Stirt.) Müll. Arg.present study
Porina tetracerae (Ach.) Müll. Arg. Boom et al. (2009), present study
Porina thaxteri R. Sant.present study
Pseudochapsa dilatata (Müll. Arg.) Parnmen, Lücking & Lumbsch Boom et al. (2009) as Chapsa dilatata (Müll. Arg.) Kalb
Pseudopyrenula subgregaria Müll. Arg. Boom et al. (2009)
Pseudopyrenula subnudata Müll. Arg. Harris (1998) as Pseudopyrenula diluta (Fée) Müll. Arg. var. degenerans Vain, Boom et al. (2009) as Pseudopyrenula diluta, Aptroot & Lücking (2016)
Pyrenopsis antillarum Vain.present study
Pyrenula adacta Féepresent study
Pyrenula astroidea (Fée) R.C. Harris Boom et al. (2009)
Pyrenula bahiana Malme Boom et al. (2009) as Pyrenula concatervans (Nyl.) R.C. Harris
Pyrenula breutelii (Müll. Arg.) Aptroot Boom et al. (2009) as Pyrenula macularis (Zahlbr.) R.C. Harris, present study
Pyrenula cinerea Zahlbr. Boom et al. (2009)
Pyrenula cocoes Müll. Arg. Boom et al. (2009), present study
Pyrenula confinis (Nyl.) R.C. Harris Boom et al. (2009)
Pyrenula cruenta (Mont.) Vain.present study
Pyrenula dissimulans (Müll. Arg.) R.C. Harrispresent study
Pyrenula duplicans (Nyl.) Aptroot Boom et al. (2009)
Pyrenula leucostoma Ach. Boom et al. (2009)
Pyrenula mamillana (Ach.) Trevis. Boom et al. (2009) as Pyrenula xyloides (Eschw.) Müll. Arg.
Pyrenula massariospora (Starbäck) R.C. Harris Boom et al. (2009)
Pyrenula microtheca R.C. Harris Boom et al. (2009)
Pyrenula nitidula (Bres.) R.C. Harris Boom et al. (2009), present study
Pyrenula septicollaris (Eschw.) R.C. Harris Boom et al. (2009)
Pyxine cocoes (Sw.) Nyl. Boom et al. (2009), present study
Ramalina anceps Nyl. Boom et al. (2009)
Ramalina complanata (Sw.) Ach. Boom et al. (2009)
Ramalina dendroides (Nyl.) Nyl. Boom et al. (2009)
Ramalina furcellata (Ach.) Zahlbr. Boom et al. (2009)
Ramalina stoffersii Sipmanpresent study
Rinodina antillarum Vain.present study
Rinodina colobinoides (Nyl.) Müll. Arg.present study
Rinodina pyxinoides Vain. Boom et al. (2009), present study
Roccella gracilis Bory Boom et al. (2009), Aptroot and Schumm (2011)
Roccellographa circumscripta (Leight.) Ertz & Tehler Boom et al. (2009) as Peterjamesia circumscripta (Taylor) D. Hawksw.
Sarcographa heteroclita (Mont.) Zahlbr. Boom et al. (2009)
Sarcographa labyrinthica (Ach.) Müll. Arg. Boom et al. (2009)
Sarcographa ramificans (Kremp.) Staiger Boom et al. (2009)
Sarcographa tricosa (Ach.) Müll. Arg. Boom et al. (2009), present study
Sclerophyton elegans Eschw. Boom et al. (2009)
Sclerophyton trinidadense Sparrius Boom et al. (2009)
Sporopodium phyllocharis (Mont.) A. Massal. Boom et al. (2009)
Squamulea subsoluta (Nyl.) Arup, Søchting & Frödén Boom et al. (2009) as Caloplaca subsoluta (Nyl.) Zahlbr., present study
Staurolemma dussii (Vain.) P.M. Jørg. & Henssenpresent study
Stegobolus auberianus (Mont.) Frisch & Kalb Boom et al. (2009)
Stegobolus granulosus (Tuck.) Frisch Boom et al. (2009)
Stegobolus subcavatus (Nyl.) Frisch Boom et al. (2009)
Sticta xanthotropa (Kremp.) D.J. GallowayHensen (BR), present study
Stigmatochroma gerontoides (Stirt.) Marbachpresent study
Stirtonia neotropica Aptroot Aptroot (2009)
Strigula decipiens (Malme) P.M. McCarthypresent study
Strigula macrospora Vain. Boom et al. (2009)
Strigula nemathora Mont. Boom et al. (2009)
Strigula obducta (Müll. Arg.) R.C. Harris Boom et al. (2009)
Strigula phaea (Ach.) R.C. Harrispresent study
Strigula smaragdula Fr. Boom et al. (2009), present study
Synalissa lichinella Vain. Boom et al. (2009)
Syncesia decussans (Nyl.) Tehlerpresent study
Syncesia farinacea (Fée) Tehler Boom et al. (2009), Sipman (2009)
Syncesia glyphysoides (Fée) Tehler Tehler (1997), Boom et al. (2009), Sipman (2009)
Syncesia graphica (Fr.) Tehler Boom et al. (2009), Sipman (2009)
Syncesia subintegra Sipman Boom et al. (2009), Sipman (2009)
Teloschistes flavicans (Sw.) Norman Boom et al. (2009) as Teloschistes flavicans var. crocea (Ach.) Müll. Arg.
Thalloloma hypoleptum (Nyl.) Staiger Boom et al. (2009)
Thelenella luridella (Nyl.) H. Mayrhoferpresent study
Thelotrema porinoides Mont. & Bosch Boom et al. (2009)
Toninia submexicana B. de Lesd. Boom et al. (2009)
Trapelia coarctata (Sm.) M. Choisy Boom et al. (2009)
Usnea baileyi (Stirt.) Zahlbr. Boom et al. (2009)
Varicellaria velata (Turner) I. Schmitt & Lumbsch Boom et al. (2009)
Verrucaria nigrescens Pers.present study
Xanthoparmelia succedans Elix & J. Johnst. Boom et al. (2009)
Lichenicolous fungus
Dactylospora saxatilis (Schaer.) Hafellner (lichenicolous on Pertusaria praetervisa)present study
Additional genera (species uncertain)
Acanthothecis sp.present study
Bacidina sp.present study
Melaspilea sp. (lichenicolous fungus)present study
Psorotichia sp.present study
Stigmidium sp. (lichenicolous fungus)present study
Thelidium sp.present study
Wetmoreana sp.present study

Results and discussion

In total, 126 lichen species (and one identifiable lichenicolous fungus) were found in 243 collections (Table 1). The vast majority (113 species) could be identified to species level based on morphological and chemical characters, even though no identification book exists for any region nearby. However, many species have been described from other islands in the Caribbean, which can be expected to have many species in common. These were often already described in the 19th century and partly never studied again, but illustrations of their types are increasingly available. The authors also had access to various unpublished sources, such as the unpublished keys, descriptions and specimen citation (by H. Sipman) that was the basis of the internet checklist of St. Eustatius lichens and keys to the lichens from Puerto Rico (Harris 1989) and Guadeloupe (Øvstedal 2010), the latter with many illustrations of type and other specimens. Somewhat to the authors’ surprise, as many as 54 (almost 50 %) of the identified species are new records for St. Eustatius. This includes mostly relatively common and widespread tropical or Neotropical species, but also some rare species, notably (Vain.) P.M. Jørg. & Henssen, which was so far only known from its type from Guadeloupe. Furthermore, it is remarkable that (Vain.) Egea & Torrente was found on siliceous rock. The presence of so many additional species within the limited surface area of the plots, totalling 6875 m2 (0.03% of the total island surface), suggests that the exploration of the lichen flora of St. Eustatius has not yet been exhaustive. However, no clearly undescribed species were found in the material and the number of species described based on material from St. Eustatius remains low with two, viz. (Aptroot 2009) and (Sipman 2009). Several specimens could not be identified with certainty in the present material but represent additional species (and in several cases additional genera). These are, for instance, and , of which the taxonomy of the tropical taxa is incompletely known. Rather than describing them as new, they were listed with the name of the species that is morphologically most similar, preceded by “cf”. The BLAST results from the mtSSU sequences obtained from eight of these specimens in most cases allowed preliminary insights into their phylogenetic position. The sequence of the specimen with only conidia from St. Eustatius receives the highest BLAST hits with other representatives of the in Nelsen et al. (2009, 2011), viz. (Vain.) R.C. Harris, (R.C. Harris) R.C. Harris, (Makhija & Patw.) Aptroot and (Lücking & Sérus.) Aptroot. The low sequence identities of 86−93% clearly indicate that the St. Eustatius specimen belongs to another species in that family, but too few mtSSU sequences are yet available for a more precise molecular identification. In the , the top five BLAST hits for the specimen of sp. were all with (M. Wirth & Hale) E. Tripp & Lendemer specimens (97% identity), whereas the identity with the sequence of the type species of , (Nyl.) Staiger & Kalb, was only 89%. The specimen from St. Eustatius thus most probably does not belong to s.str., but may represent a species of ‘ 2’ in the clade (cf. Rivas Plata et al. 2013, Medeiros et al. 2017). The specimen received BLAST hits of 97% identity with (Nyl.) Kr.P. Singh & D.D. Awasthi and (Nyl.) Staiger, Kalb & Lücking, both situated in the tribe p.p. clade of Rivas Plata et al. (2013). However, another GenBank sequence of , as well as several species of other genera of same clade, were 96 % identical, including the single other specimen of in GenBank (but not the species of the s.str. clade sensu Rivas Plata et al. 2013). The identity of the St. Eustatius specimen thus remains ambiguous based on the presently available mtSSU sequence data. Both the apotheciate and sorediate specimens are closest to sequences of species of the - p.p. clade in Miadlikowska et al. (2014), the former to (Scop.) Timdal (94 % identity) and the latter to S. Ekman and Körb. (88−89 % identity), respectively. Consequently, they do not belong to s.str., which forms a separate clade (including the type species, (Pers.) De Not.) in Miadlikowska et al. (2014). In the , was resolved as polyphyletic and mixed with , p.p. and p.p. ( clade) in molecular phylogenetic reconstructions (Gueidan et al. 2007, Muggia et al. 2010, Thüs et al. 2011). The sequence of the specimen from St. Eustatius, however, is closest to the -- p.p. ( DC., (Trevis.) Anzi) clade (Muggia et al. 2010) with sequence identities of 96−97 %. The placement of the specimen is more difficult to assess, since its sequence shows lower similarities of 92−94 % to representatives of different Verrucariceae genera, such as , and spp. Finally, the mtSSU sequence of the specimen from St. Eustatius is difficult to interpret, since it matches more closely with sequences of the (sequence identity 97−99 %) than with , in which is placed (e.g. Arup et al. 2013). The lichen flora of St. Eustatius can be characterised as lowland, relatively dry Caribbean. As can be seen from Table 1, most species were found on one substratum type, but some are less specialised. Also, there is a marked difference between the lichens of the different plots and the three main areas on St. Eustatius (Northern Hills, central urban area, The Quill). However, the authors refrain from performing statistical comparisons of the lichen diversity between plots, since the number of plots per main area differs and is still low and the sampling strategy was devised by specialists of other organism groups. Nevertheless, the lichen data will be useful for an island-wide, plot-based comparison of diversity amongst all organism groups sampled during the 2015 inventory. In Table 2, an updated checklist is presented of the lichens of St. Eustatius, citing only identified species, but based on all available sources and with their taxonomy (nomenclature and sometimes species concept) updated where necessary. According to this list, a total of 263 species are currently known from St. Eustatius. As a side effect of revising the existing records, one record becomes questionable, viz. Kremp., which is not known from the Neotropics. It is intended to continue the exploration of the lichens of this island in the near future. Updated checklist of the lichens of St. Eustatius.
  6 in total

1.  Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi.

Authors:  Conrad L Schoch; Keith A Seifert; Sabine Huhndorf; Vincent Robert; John L Spouge; C André Levesque; Wen Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-27       Impact factor: 11.205

2.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

3.  Phylogenetic placement of some morphologically unusual members of Verrucariales.

Authors:  Lucia Muggia; Cécile Gueidan; Martin Grube
Journal:  Mycologia       Date:  2010 Jul-Aug       Impact factor: 2.696

4.  Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota).

Authors:  Cécile Gueidan; Claude Roux; François Lutzoni
Journal:  Mycol Res       Date:  2007-08-26

5.  Unravelling the phylogenetic relationships of lichenised fungi in Dothideomyceta.

Authors:  M P Nelsen; R Lücking; M Grube; J S Mbatchou; L Muggia; E Rivas Plata; H T Lumbsch
Journal:  Stud Mycol       Date:  2009       Impact factor: 16.097

6.  A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families.

Authors:  Jolanta Miadlikowska; Frank Kauff; Filip Högnabba; Jeffrey C Oliver; Katalin Molnár; Emily Fraker; Ester Gaya; Josef Hafellner; Valérie Hofstetter; Cécile Gueidan; Mónica A G Otálora; Brendan Hodkinson; Martin Kukwa; Robert Lücking; Curtis Björk; Harrie J M Sipman; Ana Rosa Burgaz; Arne Thell; Alfredo Passo; Leena Myllys; Trevor Goward; Samantha Fernández-Brime; Geir Hestmark; James Lendemer; H Thorsten Lumbsch; Michaela Schmull; Conrad L Schoch; Emmanuël Sérusiaux; David R Maddison; A Elizabeth Arnold; François Lutzoni; Soili Stenroos
Journal:  Mol Phylogenet Evol       Date:  2014-04-18       Impact factor: 4.286

  6 in total

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