Literature DB >> 29677466

Measuring Electric Fields in Biological Matter Using the Vibrational Stark Effect of Nitrile Probes.

Joshua D Slocum1, Lauren J Webb1.   

Abstract

Measurement of the electrostatic interactions that give rise to biological functions has been a longstanding challenge in biophysics. Advances in spectroscopic techniques over the past two decades have allowed for the direct measurement of electric fields in a wide variety of biological molecules and systems via the vibrational Stark effect (VSE). The frequency of the nitrile stretching oscillation has received much attention as an electric field reporter because of its sensitivity to electric fields and its occurrence in a relatively transparent region of the infrared spectrum. Despite these advantages and its wide use as a VSE probe, the nitrile stretching frequency is sensitive to hydrogen bonding in a way that complicates the straightforward relationship between measured frequency and environmental electric field. Here we highlight recent applications of nitrile VSE probes with an emphasis on experiments that have helped shape our understanding of the determinants of nitrile frequencies in both hydrogen bonding and nonhydrogen bonding environments.

Entities:  

Keywords:  electric fields; infrared spectroscopy; membrane biophysics; protein electrostatics; protein–protein interactions

Mesh:

Year:  2018        PMID: 29677466     DOI: 10.1146/annurev-physchem-052516-045011

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  7 in total

1.  Origin of thiocyanate spectral shifts in water and organic solvents.

Authors:  Ruoqi Zhao; Joseph C Shirley; Euihyun Lee; Adam Grofe; Hui Li; Carlos R Baiz; Jiali Gao
Journal:  J Chem Phys       Date:  2022-03-14       Impact factor: 3.488

2.  Testing the Limitations of MD-Based Local Electric Fields Using the Vibrational Stark Effect in Solution: Penicillin G as a Test Case.

Authors:  Jacek Kozuch; Samuel H Schneider; Chu Zheng; Zhe Ji; Richard T Bradshaw; Steven G Boxer
Journal:  J Phys Chem B       Date:  2021-04-26       Impact factor: 2.991

Review 3.  Crosstalk between Bone and Nerves within Bone.

Authors:  Qian-Qian Wan; Wen-Pin Qin; Yu-Xuan Ma; Min-Juan Shen; Jing Li; Zi-Bin Zhang; Ji-Hua Chen; Franklin R Tay; Li-Na Niu; Kai Jiao
Journal:  Adv Sci (Weinh)       Date:  2021-02-10       Impact factor: 16.806

4.  Nanosecond pulsed electric signals can affect electrostatic environment of proteins below the threshold of conformational effects: The case study of SOD1 with a molecular simulation study.

Authors:  Elena Della Valle; Paolo Marracino; Olga Pakhomova; Micaela Liberti; Francesca Apollonio
Journal:  PLoS One       Date:  2019-08-27       Impact factor: 3.240

5.  A Critical Evaluation of Vibrational Stark Effect (VSE) Probes with the Local Vibrational Mode Theory.

Authors:  Niraj Verma; Yunwen Tao; Wenli Zou; Xia Chen; Xin Chen; Marek Freindorf; Elfi Kraka
Journal:  Sensors (Basel)       Date:  2020-04-21       Impact factor: 3.576

6.  Characterization of Acetonitrile Isotopologues as Vibrational Probes of Electrolytes.

Authors:  Bogdan Dereka; Nicholas H C Lewis; Jonathan H Keim; Scott A Snyder; Andrei Tokmakoff
Journal:  J Phys Chem B       Date:  2021-12-28       Impact factor: 2.991

7.  Optical mapping of biological water in single live cells by stimulated Raman excited fluorescence microscopy.

Authors:  Lixue Shi; Fanghao Hu; Wei Min
Journal:  Nat Commun       Date:  2019-10-18       Impact factor: 14.919

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.