Literature DB >> 29676726

Rhodohalobacter barkolensis sp. nov., isolated from a saline lake and emended description of the genus Rhodohalobacter.

Shuai-Bo Han1, Yang-Huan Yu1, Zhao Ju1, Yu Li1, Ran Zhang1, Xin-Jun Hou1, Xin-Yuan Ma1, Xiao-Yun Yu1, Cong Sun2, Min Wu1.   

Abstract

A Gram-stain-negative, non-motile, aerobic, rod-shaped bacterium, designated 15182T, was isolated from a saline lake in China. The novel strain 15182T was able to grow at 10-40 °C (optimum, 37 °C), pH 7.0-8.0 (optimum, 7.5) and with 0.5-4 % NaCl (optimum, 2-3 %, w/v). The phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 15182T was most closely related to the genus Rhodohalobacter by sharing the highest sequence similarity of 97.0 % with Rhodohalobacter halophilus JZ3C29T. Chemotaxonomic analysis showed that the sole respiratory quinone was menaquinone 7, the major fatty acids included C16 : 0 N alcohol and C16 : 1ω11c. The major polar lipids included diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, four uncharacterized glycolipids, one uncharacterized phospholipid and two uncharacterized lipids. The genomic DNA G+C content of the strain 15182T was 42.4 mol%. The average nucleotide identity value between 15182T and R. halophilus JZ3C29T was 75.4 %, and the in silico DNA-DNA hybridization value of the two strains was 19.1 %. On the basis of its phenotypic, chemotaxonomic, genotypic and genomic characteristics presented in this study, strain 15182T is suggested to represent a novel species in the genus Rhodohalobacter, for which the name Rhodohalobacter barkolensis sp. nov. is proposed. The type strain is 15182T (=KCTC 62172T=MCCC 1K03442T). An emended description of the genus Rhodohalobacter is also presented.

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Keywords:  Rhodohalobacter; phylogenetic analysis; whole genome sequencing

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Year:  2018        PMID: 29676726     DOI: 10.1099/ijsem.0.002775

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Rhodohalobacter sulfatireducens sp. nov., isolated from a marine solar saltern.

Authors:  Yu-Sheng Wang; Yu-Yan Yue; Yi-Lin Bai; Xu-Yang Zhang; Shuo Wang; Zong-Jun Du
Journal:  Arch Microbiol       Date:  2022-07-05       Impact factor: 2.552

2.  Dissecting Light Sensing and Metabolic Pathways on the Millimeter Scale in High-Altitude Modern Stromatolites.

Authors:  Daniel Gonzalo Alonso-Reyes; Fátima Silvina Galván; José Matías Irazoqui; Ariel Amadio; Diogo Tschoeke; Fabiano Thompson; Virginia Helena Albarracín; María Eugenia Farias
Journal:  Microb Ecol       Date:  2022-09-26       Impact factor: 4.192

  2 in total

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