Literature DB >> 29675559

Truncated aptamers for total and glycated hemoglobin, and their integration into a graphene oxide-based fluorometric method for high-throughput screening for diabetes.

Abrar Yousef Almusharraf1, Shimaa Eissa1, Mohammed Zourob2,3.   

Abstract

The authors describe the identification of an effective binding region of aptamers against glycated (HbA1c) and total haemoglobin (tHb) by using a fluorometric assay. Truncation of the originally selected aptamers from 60 to 46 and 34 nucleotides for HbA1c and tHb, respectively, enhances the affinity for their targets. Moreover, shortening the aptamer sequences leads to a better conformational change after target binding which enabled the integration of the aptamers in a graphene oxide (GO)-based fluorometric assay. First, fluorescein-labelled truncated aptamers were physically absorbed onto the surface of GO surface via π-stacking interaction. This leads to quenching of fluorescence. Once the truncated aptamers bind the target protein, a conformational change is induced which results (a) )in the release of the aptamers from the surface of GO and (b) in the restoration of green fluorescence that is measured at 515 nm. The assay can be carried out in a microtiter plate format in homogeneous solution, this avoiding the steps of immobilization, incubation, and washing that are often necessary in immunoassays. This also reduces the time and the costs of the overall assay and allows for high throughput screening for diabetes. HbA1c can be detected in the range from 5.4 to 10.6%. The assay is selective for HbA1c over other proteins that commonly exist in blood. The results obtained by using this method compare well with those of a turbidimetric immunoassay that is typically applied in clinical laboratories. Graphical abstract Truncated aptamers for total and glycated hemoglobin were selected and integrated into a graphene oxide-based fluorescence detection assay for high-throughput screening for diabetes.

Entities:  

Keywords:  Clinical assay; Diabetes diagnosis; Fluorescence assay; Haemoglobin A1c; Microplate assay; Truncation

Mesh:

Substances:

Year:  2018        PMID: 29675559     DOI: 10.1007/s00604-018-2789-3

Source DB:  PubMed          Journal:  Mikrochim Acta        ISSN: 0026-3672            Impact factor:   5.833


  33 in total

1.  Use of GHb (HbA1c) in screening for undiagnosed diabetes in the U.S. population.

Authors:  C L Rohlfing; R R Little; H M Wiedmeyer; J D England; R Madsen; M I Harris; K M Flegal; M S Eberhardt; D E Goldstein
Journal:  Diabetes Care       Date:  2000-02       Impact factor: 19.112

2.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.

Authors:  C Tuerk; L Gold
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

Review 3.  2. Classification and Diagnosis of Diabetes.

Authors: 
Journal:  Diabetes Care       Date:  2017-01       Impact factor: 19.112

4.  Label-free electrochemical immunosensor based on graphene/methylene blue nanocomposite.

Authors:  Kexia Mao; Dan Wu; Yan Li; Hongmin Ma; Zizhen Ni; Haiqin Yu; Chuannan Luo; Qin Wei; Bin Du
Journal:  Anal Biochem       Date:  2012-01-08       Impact factor: 3.365

5.  Fluorometric graphene oxide-based detection of Salmonella enteritis using a truncated DNA aptamer.

Authors:  Raja Chinnappan; Saleh AlAmer; Shimaa Eissa; Anas Abdel Rahamn; Khalid M Abu Salah; Mohammed Zourob
Journal:  Mikrochim Acta       Date:  2017-12-18       Impact factor: 5.833

6.  Glycated hemoglobin detection with electrochemical sensing amplified by gold nanoparticles embedded N-doped graphene nanosheet.

Authors:  Utkarsh Jain; Nidhi Chauhan
Journal:  Biosens Bioelectron       Date:  2016-02-12       Impact factor: 10.618

7.  Aptamer/graphene oxide nanocomplex for in situ molecular probing in living cells.

Authors:  Ying Wang; Zhaohui Li; Dehong Hu; Chiann-Tso Lin; Jinghong Li; Yuehe Lin
Journal:  J Am Chem Soc       Date:  2010-07-14       Impact factor: 15.419

8.  Recent trends in SELEX technique and its application to food safety monitoring.

Authors:  Jingjing Wu; Yingyue Zhu; Feng Xue; Zhanlong Mei; Li Yao; Xin Wang; Lei Zheng; Jian Liu; Guodong Liu; Chifang Peng; Wei Chen
Journal:  Mikrochim Acta       Date:  2014-04       Impact factor: 5.833

9.  The glycosylation of hemoglobin: relevance to diabetes mellitus.

Authors:  H F Bunn; K H Gabbay; P M Gallop
Journal:  Science       Date:  1978-04-07       Impact factor: 47.728

10.  Probing high affinity sequences of DNA aptamer against VEGF165.

Authors:  Harleen Kaur; Lin-Yue Lanry Yung
Journal:  PLoS One       Date:  2012-02-16       Impact factor: 3.240

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  4 in total

1.  Fluorometric determination of okadaic acid using a truncated aptamer.

Authors:  Raja Chinnappan; Razan AlZabn; Tanveer Ahmad Mir; Mamoun Bader; Mohammed Zourob
Journal:  Mikrochim Acta       Date:  2019-06-10       Impact factor: 5.833

2.  Fluorometric determination of lipopolysaccharides via changes of the graphene oxide-enhanced fluorescence polarization caused by truncated aptamers.

Authors:  Hua Ye; Nuo Duan; Huajie Gu; Haitao Wang; Zhouping Wang
Journal:  Mikrochim Acta       Date:  2019-02-15       Impact factor: 5.833

Review 3.  Chemical Modification of Aptamers for Increased Binding Affinity in Diagnostic Applications: Current Status and Future Prospects.

Authors:  Jan P Elskens; Joke M Elskens; Annemieke Madder
Journal:  Int J Mol Sci       Date:  2020-06-25       Impact factor: 5.923

Review 4.  Aptamer-Based Biosensors for the Colorimetric Detection of Blood Biomarkers: Paving the Way to Clinical Laboratory Testing.

Authors:  Anna Davydova; Mariya Vorobyeva
Journal:  Biomedicines       Date:  2022-07-06
  4 in total

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