Literature DB >> 29666337

Mitochondrial signatures revealed panmixia in Lutjanus argentimaculatus (Forsskål 1775).

A Gopalakrishnan1, N Vineesh, Shihab Ismail, Muktha Menon, K V Akhilesh, N S Jeena, M P Paulton, P Vijayagopal.   

Abstract

Mangrove red snapper, Lutjanus argentimaculatus is a commercially important fish. The genetic stock structure of L. argentimaculatus from Indian waters was identified using mitochondrial ATPase 6 and ATPase 8, and cytochrome b (Cytb) genes. A 842 bp region of ATPase 6/8 genes and 1105 bp region of Cytb gene were amplified in 120 samples from six different locations along the Indian coast and obtained 58 and 66 haplotypes, respectively. The high haplotype and low nucleotide diversity values along with mismatch distribution, Tajima's D and Fu's Fs analysis suggested a genetic bottleneck events or founder effect, with subsequent population expansion in L. argentimaculatus. Coefficient of genetic differentiation (FST) values was low and nonsignificant for both ATPase 6/8 gene and Cytb genes indicating low genetic differentiation in L. argentimaculatus which can be managed as a unit stock in Indian waters.

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Year:  2018        PMID: 29666337

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  22 in total

1.  Population growth makes waves in the distribution of pairwise genetic differences.

Authors:  A R Rogers; H Harpending
Journal:  Mol Biol Evol       Date:  1992-05       Impact factor: 16.240

2.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

3.  Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection.

Authors:  Y X Fu
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

4.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

5.  Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution.

Authors:  H C Harpending
Journal:  Hum Biol       Date:  1994-08       Impact factor: 0.553

6.  An approach to population and evolutionary genetic theory for genes in mitochondria and chloroplasts, and some results.

Authors:  C W Birky; T Maruyama; P Fuerst
Journal:  Genetics       Date:  1983-03       Impact factor: 4.562

7.  Weak genetic differentiation in cobia, Rachycentron canadum from Indian waters as inferred from mitochondrial DNA ATPase 6 and 8 genes.

Authors:  Linu Joy; C Mohitha; P R Divya; A Gopalakrishnan; V S Basheer; J K Jena
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2015-06-15       Impact factor: 1.514

8.  PCR-RFLP analysis of cytochrome b gene does not support Coilia ectenes taihuensis being a subspecies of Coilia ectenes.

Authors:  Qi-Qun Cheng; Da-Ru Lu
Journal:  J Genet       Date:  2005-12       Impact factor: 1.166

9.  Mitochondrial ATPase 6/8 genes to infer the population genetic structure of silver pomfret fish Pampus argenteus along the Indian waters.

Authors:  P R Divya; A Gopalakrishnan; V S Basheer; Raja Swaminathan; C Mohitha; Linu Joy; Raj Kumar; P Manoj; J K Jena
Journal:  Mitochondrial DNA       Date:  2014-02-03

10.  The extent of population genetic subdivision differs among four co-distributed shark species in the Indo-Australian archipelago.

Authors:  Jenny R Ovenden; Tom Kashiwagi; Damien Broderick; Jenny Giles; John Salini
Journal:  BMC Evol Biol       Date:  2009-02-12       Impact factor: 3.260

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