| Literature DB >> 29659636 |
Duc T Nguyen1, Helen E Jenkins2, Edward A Graviss1.
Abstract
BACKGROUND: Estimating mortality risk during TB treatment in HIV co-infected patients is challenging for health professionals, especially in a low TB prevalence population, due to the lack of a standardized prognostic system. The current study aimed to develop and validate a simple mortality prognostic scoring system for TB/HIV co-infected patients.Entities:
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Year: 2018 PMID: 29659636 PMCID: PMC5901929 DOI: 10.1371/journal.pone.0196022
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Flowchart of the study population.
Footnote: TBGIMS, TB Genotyping Information Management System.
Demographic and clinical characteristics of the study population compared with those not included in the study.
| Included | Excluded | ||
|---|---|---|---|
| Age (years) | 0.91 | ||
| 15–44 | 256 (56.9%) | 67 (56.3%) | |
| ≥45 | 194 (43.1%) | 52 (43.7%) | |
| Gender | 0.15 | ||
| Female | 104 (23.1%) | 20 (16.9%) | |
| Male | 346 (76.9%) | 98 (83.1%) | |
| Race/Ethnicity | 0.24 | ||
| White | 44 (9.8%) | 11 (9.2%) | |
| Black | 216 (48.0%) | 47 (39.5%) | |
| Hispanic | 174 (38.7%) | 54 (45.4%) | |
| Asian | 14 (3.1%) | 5 (4.2%) | |
| Other | 2 (0.4%) | 2 (1.7%) | |
| US-born | 0.29 | ||
| No | 184 (40.9%) | 55 (46.2%) | |
| Yes | 266 (59.1%) | 64 (53.8%) | |
| Resident of long-term care facility | 0.99 | ||
| No | 443 (98.4%) | 117 (98.3%) | |
| Yes | 7 (1.6%) | 2 (1.7%) | |
| Chronic kidney failure | 0.25 | ||
| No | 443 (98.4%) | 115 (96.6%) | |
| Yes | 7 (1.6%) | 4 (3.4%) | |
| Meningeal TB | 0.30 | ||
| No | 424 (94.2%) | 109 (91.6%) | |
| Yes | 26 (5.8%) | 10 (8.4%) | |
| Miliary TB | 0.48 | ||
| No | 403 (91.0%) | 107 (93.0%) | |
| Yes | 40 (9.0%) | 8 (7.0%) | |
| TB-CXR | 0.59 | ||
| No | 62 (14.3%) | 17 (16.3%) | |
| Yes | 372 (85.7%) | 87 (83.7%) | |
| TB case verified by | 0.93 | ||
| Clinical case definition/provider diagnosis | 81 (18.0%) | 21 (17.6%) | |
| Positive culture, NAA | 369 (82.0%) | 98 (82.4%) |
Note: Values are in number and % unless otherwise specified.
*differences across groups were compared using the Chi-square or Fisher’s exact tests, as appropriate.
†TB-CXR: TB-specific abnormalities on chest radiograph.
‡NAA: Nucleic Acid Amplification.
Crude associations between potential risk factors and mortality.
| Total | Completed | Deceased | Unadjusted OR (95% CI) | ||
|---|---|---|---|---|---|
| Age ≥45 (years) | 194 (43.1%) | 157 (39.9%) | 37 (64.9%) | 2.78 (1.56, 4.97) | 0.001 |
| Male gender | 346 (76.9%) | 303 (77.1%) | 43 (75.4%) | 0.91 (0.48, 1.74) | 0.78 |
| Race/Ethnicity | |||||
| White | 44 (9.8%) | 37 (9.4%) | 7 (12.3%) | 1.22 (0.5, 2.99) | 0.66 |
| Black | 216 (48.0%) | 187 (47.6%) | 29 (50.9%) | (ref) | |
| Hispanic | 174 (38.7%) | 155 (39.4%) | 19 (33.3%) | 0.79 (0.43, 1.46) | 0.46 |
| Asian | 14 (3.1%) | 12 (3.1%) | 2 (3.5%) | 1.07 (0.23, 5.05) | 0.93 |
| Other | 2 (0.4%) | 2 (0.5%) | 0 (0.0%) | -- | -- |
| US-born | 266 (59.1%) | 227 (57.8%) | 39 (68.4%) | 1.58 (0.88, 2.87) | 0.13 |
| Homeless | 61 (13.6%) | 48 (12.2%) | 13 (22.8%) | 2.12 (1.07, 4.23) | 0.03 |
| Resident of correction institution | 35 (8.3%) | 33 (9.0%) | 2 (3.7%) | 0.39 (0.09, 1.67) | 0.20 |
| Resident of long-term care facility | 7 (1.6%) | 3 (0.8%) | 4 (7.0%) | 9.81 (2.14, 45.05) | 0.003 |
| IDU | 38 (8.4%) | 31 (7.9%) | 7 (12.3%) | 1.63 (0.68, 3.91) | 0.27 |
| Excess alcohol use within past 12 months | 144 (32.0%) | 126 (32.1%) | 18 (31.6%) | 0.98 (0.54, 1.78) | 0.94 |
| History of diabetes | 21 (4.7%) | 13 (3.3%) | 8 (14.0%) | 4.77 (1.88, 12.09) | 0.001 |
| Chronic kidney failure | 7 (1.6%) | 4 (1.0%) | 3 (5.3%) | 5.4 (1.18, 24.8) | 0.03 |
| TB site | 395 (87.8%) | 347 (88.3%) | 48 (84.2%) | 0.71 (0.33, 1.54) | 0.38 |
| Meningeal TB | 26 (5.8%) | 18 (4.6%) | 8 (14.0%) | 3.4 (1.4, 8.24) | 0.01 |
| Miliary TB | 40 (9.0%) | 32 (8.3%) | 8 (14.3%) | 1.85 (0.81, 4.25) | 0.15 |
| TB-CXR | 372 (85.7%) | 323 (85.0%) | 49 (90.7%) | 1.73 (0.66, 4.53) | 0.27 |
| Cavitation on CXR | 63 (16.9%) | 60 (18.6%) | 3 (6.1%) | 0.29 (0.09, 0.95) | 0.04 |
| Positive AFB smear | 173 (41.4%) | 153 (41.0%) | 20 (44.4%) | 1.15 (0.62, 2.15) | 0.66 |
| Positive MTB culture | 280 (67.6%) | 244 (66.3%) | 36 (78.3%) | 1.83 (0.88, 3.81) | 0.11 |
| Sputum culture not converted or unknown | 211 (46.9%) | 168 (42.7%) | 43 (75.4%) | 4.11 (2.18, 7.76) | <0.001 |
| TB confirmed by positive culture or NAA | 369 (82.0%) | 317 (80.7%) | 52 (91.2%) | 2.49 (0.96, 6.46) | 0.06 |
| MDR-TB | 1 (0.2%) | 1 (0.3%) | 0 (0.0%) | -- | |
| East Asian lineage (L2) | 75 (21.8%) | 62 (20.9%) | 13 (27.7%) | 1.45 (0.72, 2.91) | 0.30 |
IDU: injecting drug user; CXR: chest radiograph; NAA: Nucleic Acid Amplification; MDR-TB: Multi-drug resistant tuberculosis; excess alcohol use, having consumed five or more drinks on the same occasion on each of 5 or more days in the past 30 days, either self-reported or medically documented [12].
Multiple logistic regression model and weighted point assignment.
| Variable | β coefficient | Adjusted OR (95% CI) | Weighted Points | |
|---|---|---|---|---|
| Age ≥45 (years) | 1.07 | 2.91 (1.47, 5.78) | 0.002 | 5 |
| Resident of long-term care facility | 2.54 | 12.69 (1.84, 87.44) | 0.01 | 12 |
| Meningeal TB | 2.00 | 7.38 (2.42, 22.48) | <0.001 | 9 |
| TB-CXR | 1.38 | 3.97 (1.17, 13.5) | 0.03 | 6 |
| TB confirmed by positive culture or NAA | 1.90 | 6.68 (2.33, 19.16) | <0.001 | 9 |
| Culture not converted or unknown conversion status | 2.19 | 8.9 (4.23, 18.74) | <0.001 | 10 |
Note: NAA: Nucleic Acid Amplification; Weighted points of a risk factor were calculated using a linear transformation of the corresponding β coefficient [was divided by the smallest β coefficient (1.07, age), multiplied by a constant (5), and rounded to the nearest integer]; Intercept = -6.994499.
Mortality by risk group in patients having complete data for all variables of the multiple logistic regression model.
| Risk group | Mean score (±SD) | Mortality (%) | ||
|---|---|---|---|---|
| Low-risk group (<20 points) | 194 (43.1%) | 15 (±2.2) | 2.6% | <0.001 |
| Medium-risk group (20–25 points) | 177 (39.3%) | 21.8 (±2.2) | 11.9% | |
| High-risk group (>25 points) | 63 (14.0%) | 30.8 (±2.9) | 44.4% | |
| Incomplete data for all variables of multiple logistic regression model | 16 (3.6%) | -- | 18.8% | |
| All (N = 450) | 450 (100%) | 20.1 (±5.9) | 12.7% | |
| AUC (95% CI), final model in development | 0.82 (0.76, 0.89) | |||
| AUC (95% CI), final model in bootstrap validation | 0.80 (0.72, 0.88) | |||
| AUC (95% CI), prognostic score alone | 0.82 (0.76, 0.88) | |||
| AUC (95% CI), prognostic score alone, bootstrap validation | 0.79 (0.70, 0.87) | |||
| Hosmer-Lemeshow’s goodness of fit test, final model | Chi-square = 3.74; | |||
| Hosmer-Lemeshow’s goodness of fit test, prognostic score alone | Chi-square = 4.25; | |||
| Brier score, final model | 0.09 | |||
| Brier score, prognostic score alone | 0.09 | |||
Comparisons of mortality between risk groups were conducted using Chi-square test.
*Overall p-value. A p<0.001 was also found for all pairwise comparisons among groups (i.e. low-risk vs. medium-risk, low-risk vs. high-risk and medium-risk vs. high-risk groups); a non-significant Hosmer-Lemeshow goodness of fit test indicates good calibration; Brier score: ranged 0–1, the smaller the score, the better performance.
Fig 2Receiver operating characteristic (ROC) curve.
Odds for death, by risk group (with bootstrap in estimating coefficient standard errors).
| Risk group | OR (95% CI) | |
|---|---|---|
| Low-risk group (<20 points) | (ref) | |
| Medium-risk group (20–25 points) | 5.09 (1.88, 13.81) | 0.001 |
| High-risk group (>25 points) | 30.24 (10.93, 83.66) | <0.001 |